FFCP PHASE1:Hg19::chr10:105652086..105652091,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105652086..105652091,- | |||
|description=CAGE_peak_at_chr10:105652086..105652091,- | |description=CAGE_peak_at_chr10:105652086..105652091,- | ||
|id=chr10:105652086..105652091,- | |id=chr10:105652086..105652091,- | ||
|ontology_enrichment_celltype=CL:0000622!3.90e-18!5;CL:0002076!1.00e-15!43;CL:0000154!4.72e-15!6;CL:0002623!1.65e-11!3;CL:0000223!1.93e-10!59;CL:0000150!6.67e-10!9;CL:0000244!5.67e-09!4;CL:0000731!5.67e-09!4;CL:0002251!6.45e-09!21;CL:0000317!2.42e-08!2;CL:1000448!2.42e-08!2;CL:0002308!2.42e-08!2;CL:0002140!2.42e-08!2;CL:0002536!3.20e-08!2;CL:0000575!5.59e-08!2;CL:0000066!1.42e-07!254;CL:0002327!1.59e-07!4 | |ontology_enrichment_celltype=CL:0000622!3.90e-18!5;CL:0002076!1.00e-15!43;CL:0000154!4.72e-15!6;CL:0002623!1.65e-11!3;CL:0000223!1.93e-10!59;CL:0000150!6.67e-10!9;CL:0000244!5.67e-09!4;CL:0000731!5.67e-09!4;CL:0002251!6.45e-09!21;CL:0000317!2.42e-08!2;CL:1000448!2.42e-08!2;CL:0002308!2.42e-08!2;CL:0002140!2.42e-08!2;CL:0002536!3.20e-08!2;CL:0000575!5.59e-08!2;CL:0000066!1.42e-07!254;CL:0002327!1.59e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000622;3.21e-35;5!CL:0000154;2.01e-29;6!CL:0000244;1.05e-25;4!CL:0000731;1.05e-25;4!CL:0000317;1.07e-22;2!CL:1000448;1.07e-22;2!CL:0002308;1.07e-22;2!CL:0002536;1.07e-22;2!CL:0002140;1.07e-22;2!CL:0000150;9.67e-20;9!CL:0002623;1.02e-15;3!CL:0002159;1.20e-07;14!CL:0000575;6.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.15e-35,5;CL:0000154,1.44e-29,6;CL:0000244,9.31e-26,4;CL:0000731,9.31e-26,4;CL:0000317,5.47e-23,2;CL:1000448,5.47e-23,2;CL:0002308,5.47e-23,2;CL:0002140,5.47e-23,2;CL:0002536,1.33e-22,2;CL:0000150,7.77e-20,9;CL:0002623,1.14e-15,3;CL:0002159,1.06e-07,14;CL:0000575,6.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.88e-13;1!UBERON:0008814;9.53e-07;2!UBERON:0010056;9.53e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;3.08e-12;1!DOID:326;3.08e-12;1!DOID:3978;3.08e-12;1!DOID:3394;3.08e-12;1!DOID:5844;3.08e-12;1!DOID:114;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,3.45e-12,1;DOID:326,3.45e-12,1;DOID:3978,3.45e-12,1;DOID:3394,3.45e-12,1;DOID:5844,3.45e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001044!1.69e-14!6;UBERON:0003293!1.69e-14!6;UBERON:0003294!1.69e-14!6;UBERON:0010047!1.69e-14!6;UBERON:0000167!1.69e-14!6;UBERON:0000166!1.71e-14!21;UBERON:0005631!1.92e-14!14;UBERON:0000158!1.92e-14!14;UBERON:0001004!7.96e-14!72;UBERON:0004119!2.14e-13!169;UBERON:0000925!2.14e-13!169;UBERON:0006595!2.14e-13!169;UBERON:0000161!2.11e-11!35;UBERON:0000078!2.22e-11!18;UBERON:0000165!2.36e-10!28;UBERON:0000930!2.36e-10!28;UBERON:0002365!5.36e-09!31;UBERON:0002330!5.36e-09!31;UBERON:0003408!1.49e-08!10;UBERON:0000305!2.09e-08!7;UBERON:0002419!2.42e-08!2;UBERON:0007771!2.42e-08!2;UBERON:0003297!2.42e-08!2;UBERON:0001821!2.42e-08!2;UBERON:0003487!2.42e-08!2;UBERON:0001820!2.42e-08!2;UBERON:0005089!2.42e-08!2;UBERON:0005088!2.42e-08!2;UBERON:0005795!4.09e-08!22;UBERON:0003127!4.54e-08!2;UBERON:0000065!5.18e-08!53;UBERON:0001987!5.40e-08!4;UBERON:0004340!5.40e-08!4;UBERON:0000341!6.87e-08!2;UBERON:0000478!7.56e-08!24;UBERON:0001444!9.86e-08!48;UBERON:0003124!1.15e-07!7;UBERON:0001911!1.59e-07!4;UBERON:0005333!1.59e-07!4;UBERON:0008425!1.59e-07!4;UBERON:0005311!1.59e-07!4;UBERON:0004871!2.38e-07!8;UBERON:0000365!3.05e-07!5;UBERON:0000077!3.16e-07!130 | |ontology_enrichment_uberon=UBERON:0001044!1.69e-14!6;UBERON:0003293!1.69e-14!6;UBERON:0003294!1.69e-14!6;UBERON:0010047!1.69e-14!6;UBERON:0000167!1.69e-14!6;UBERON:0000166!1.71e-14!21;UBERON:0005631!1.92e-14!14;UBERON:0000158!1.92e-14!14;UBERON:0001004!7.96e-14!72;UBERON:0004119!2.14e-13!169;UBERON:0000925!2.14e-13!169;UBERON:0006595!2.14e-13!169;UBERON:0000161!2.11e-11!35;UBERON:0000078!2.22e-11!18;UBERON:0000165!2.36e-10!28;UBERON:0000930!2.36e-10!28;UBERON:0002365!5.36e-09!31;UBERON:0002330!5.36e-09!31;UBERON:0003408!1.49e-08!10;UBERON:0000305!2.09e-08!7;UBERON:0002419!2.42e-08!2;UBERON:0007771!2.42e-08!2;UBERON:0003297!2.42e-08!2;UBERON:0001821!2.42e-08!2;UBERON:0003487!2.42e-08!2;UBERON:0001820!2.42e-08!2;UBERON:0005089!2.42e-08!2;UBERON:0005088!2.42e-08!2;UBERON:0005795!4.09e-08!22;UBERON:0003127!4.54e-08!2;UBERON:0000065!5.18e-08!53;UBERON:0001987!5.40e-08!4;UBERON:0004340!5.40e-08!4;UBERON:0000341!6.87e-08!2;UBERON:0000478!7.56e-08!24;UBERON:0001444!9.86e-08!48;UBERON:0003124!1.15e-07!7;UBERON:0001911!1.59e-07!4;UBERON:0005333!1.59e-07!4;UBERON:0008425!1.59e-07!4;UBERON:0005311!1.59e-07!4;UBERON:0004871!2.38e-07!8;UBERON:0000365!3.05e-07!5;UBERON:0000077!3.16e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.07e-22;2!UBERON:0007771;1.07e-22;2!UBERON:0003297;1.07e-22;2!UBERON:0001821;1.07e-22;2!UBERON:0003487;1.07e-22;2!UBERON:0001820;1.07e-22;2!UBERON:0000365;1.05e-20;5!UBERON:0005910;2.31e-17;6!UBERON:0001723;1.02e-15;3!UBERON:0001033;1.02e-15;3!UBERON:0000305;9.55e-15;7!UBERON:0002372;1.32e-12;1!UBERON:0001961;1.32e-12;1!UBERON:0001744;1.32e-12;1!UBERON:0001042;1.32e-12;1!UBERON:0001735;1.32e-12;1!UBERON:0005631;1.70e-10;10!UBERON:0000158;1.70e-10;10!UBERON:0000165;7.76e-10;28!UBERON:0000486;5.76e-09;12!UBERON:0001044;2.56e-08;6!UBERON:0003293;2.56e-08;6!UBERON:0003294;2.56e-08;6!UBERON:0010047;2.56e-08;6!UBERON:0003408;2.56e-08;6!UBERON:0000167;2.56e-08;6!UBERON:0001041;9.13e-08;14!UBERON:0000341;4.55e-07;2!UBERON:0006562;6.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.47e-23,2;UBERON:0007771,5.47e-23,2;UBERON:0003297,5.47e-23,2;UBERON:0001821,5.47e-23,2;UBERON:0003487,5.47e-23,2;UBERON:0001820,5.47e-23,2;UBERON:0005089,5.47e-23,2;UBERON:0005088,5.47e-23,2;UBERON:0000365,9.55e-21,5;UBERON:0005910,2.13e-17,6;UBERON:0001723,1.06e-15,3;UBERON:0001033,1.06e-15,3;UBERON:0010056,1.06e-15,3;UBERON:0000305,1.03e-14,7;UBERON:0004871,5.95e-13,8;UBERON:0000166,1.71e-12,22;UBERON:0002372,1.75e-12,1;UBERON:0001961,1.75e-12,1;UBERON:0001744,1.75e-12,1;UBERON:0001735,1.75e-12,1;UBERON:0001042,1.46e-10,10;UBERON:0009145,1.46e-10,10;UBERON:0006562,1.19e-09,11;UBERON:0000165,1.86e-09,29;UBERON:0000930,1.86e-09,29;UBERON:0001044,2.71e-08,6;UBERON:0003293,2.71e-08,6;UBERON:0003294,2.71e-08,6;UBERON:0010047,2.71e-08,6;UBERON:0000167,2.71e-08,6;UBERON:0000153,3.73e-08,62;UBERON:0007811,3.73e-08,62;UBERON:0001444,9.13e-08,49;UBERON:0005631,1.25e-07,14;UBERON:0000158,1.25e-07,14;UBERON:0000161,1.35e-07,36;UBERON:0000341,4.56e-07,2;UBERON:0000033,9.63e-07,56 | |||
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| ||
|short_description=p@chr10:105652086..105652091,- | |short_description=p@chr10:105652086..105652091,- | ||
}} | }} |
Latest revision as of 10:03, 23 July 2015
Short description: | p@chr10:105652086..105652091, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105652086..105652091, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.15e-35 | 5 |
protein secreting cell | 1.44e-29 | 6 |
transitional epithelial cell | 9.31e-26 | 4 |
urothelial cell | 9.31e-26 | 4 |
sebum secreting cell | 5.47e-23 | 2 |
epithelial cell of sweat gland | 5.47e-23 | 2 |
epithelial cell of skin gland | 5.47e-23 | 2 |
acinar cell of sebaceous gland | 5.47e-23 | 2 |
amniotic epithelial cell | 1.33e-22 | 2 |
glandular epithelial cell | 7.77e-20 | 9 |
acinar cell of salivary gland | 1.14e-15 | 3 |
general ecto-epithelial cell | 1.06e-07 | 14 |
corneal epithelial cell | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.47e-23 | 2 |
epidermis gland | 5.47e-23 | 2 |
gland of integumental system | 5.47e-23 | 2 |
sebaceous gland | 5.47e-23 | 2 |
skin sebaceous gland | 5.47e-23 | 2 |
sweat gland | 5.47e-23 | 2 |
sweat gland placode | 5.47e-23 | 2 |
sebaceous gland placode | 5.47e-23 | 2 |
urothelium | 9.55e-21 | 5 |
transitional epithelium | 2.13e-17 | 6 |
tongue | 1.06e-15 | 3 |
gustatory system | 1.06e-15 | 3 |
future tongue | 1.06e-15 | 3 |
amnion | 1.03e-14 | 7 |
somatic layer of lateral plate mesoderm | 5.95e-13 | 8 |
oral opening | 1.71e-12 | 22 |
tonsil | 1.75e-12 | 1 |
mucosa-associated lymphoid tissue | 1.75e-12 | 1 |
lymphoid tissue | 1.75e-12 | 1 |
tonsillar ring | 1.75e-12 | 1 |
chordate pharynx | 1.46e-10 | 10 |
pharyngeal region of foregut | 1.46e-10 | 10 |
pharynx | 1.19e-09 | 11 |
mouth | 1.86e-09 | 29 |
stomodeum | 1.86e-09 | 29 |
saliva-secreting gland | 2.71e-08 | 6 |
gland of oral region | 2.71e-08 | 6 |
gland of foregut | 2.71e-08 | 6 |
oral gland | 2.71e-08 | 6 |
oral cavity | 2.71e-08 | 6 |
anterior region of body | 3.73e-08 | 62 |
craniocervical region | 3.73e-08 | 62 |
subdivision of head | 9.13e-08 | 49 |
extraembryonic membrane | 1.25e-07 | 14 |
membranous layer | 1.25e-07 | 14 |
orifice | 1.35e-07 | 36 |
throat | 4.56e-07 | 2 |
head | 9.63e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 3.45e-12 | 1 |
ischemia | 3.45e-12 | 1 |
extrinsic cardiomyopathy | 3.45e-12 | 1 |
myocardial ischemia | 3.45e-12 | 1 |
myocardial infarction | 3.45e-12 | 1 |