FFCP PHASE1:Hg19::chr10:105610418..105610432,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105610418..105610432,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr10:105610418..105610432,- | |description=CAGE_peak_at_chr10:105610418..105610432,- | ||
|id=chr10:105610418..105610432,- | |id=chr10:105610418..105610432,- | ||
|ontology_enrichment_celltype=CL:0002619!2.46e-08!3;CL:0002552!6.77e-07!5 | |ontology_enrichment_celltype=CL:0002619!2.46e-08!3;CL:0002552!6.77e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000235;7.53e-63;6!CL:0002619;2.96e-47;3!CL:0000840;1.63e-23;5!CL:0000990;6.49e-16;8!CL:0000451;3.86e-13;10!CL:0000473;1.81e-09;39!CL:0000234;1.81e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.03e-63,6;CL:0002619,2.96e-47,3;CL:0002194,7.94e-30,59;CL:0000576,7.94e-30,59;CL:0000040,7.94e-30,59;CL:0000559,7.94e-30,59;CL:0002009,7.74e-29,61;CL:0000839,1.27e-26,66;CL:0000557,3.23e-26,67;CL:0000766,2.32e-24,72;CL:0000840,1.57e-23,5;CL:0001029,1.57e-23,5;CL:0000763,5.27e-16,108;CL:0000049,5.27e-16,108;CL:0000990,6.33e-16,8;CL:0002087,5.60e-15,115;CL:0002031,2.56e-14,120;CL:0000451,3.79e-13,10;CL:0000738,1.59e-12,136;CL:0002032,2.00e-10,161;CL:0000837,2.00e-10,161;CL:0000037,6.02e-10,168;CL:0000988,2.18e-09,177;CL:0000473,6.23e-08,48;CL:0000234,6.23e-08,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001828!4.53e-09!8;UBERON:0000161!3.39e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.75e-23,76;UBERON:0001474,2.56e-21,82;UBERON:0004765,2.32e-19,90;UBERON:0002405,1.03e-18,93;UBERON:0002390,1.02e-17,98;UBERON:0003061,1.02e-17,98;UBERON:0001434,2.38e-17,100;UBERON:0002193,5.27e-16,108;UBERON:0002204,4.91e-12,167;UBERON:0003081,4.82e-08,203 | |||
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| ||
|short_description=p@chr10:105610418..105610432,- | |short_description=p@chr10:105610418..105610432,- | ||
}} | }} |
Latest revision as of 10:02, 23 July 2015
Short description: | p@chr10:105610418..105610432, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105610418..105610432, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.03e-63 | 6 |
adult endothelial progenitor cell | 2.96e-47 | 3 |
monopoietic cell | 7.94e-30 | 59 |
monocyte | 7.94e-30 | 59 |
monoblast | 7.94e-30 | 59 |
promonocyte | 7.94e-30 | 59 |
macrophage dendritic cell progenitor | 7.74e-29 | 61 |
myeloid lineage restricted progenitor cell | 1.27e-26 | 66 |
granulocyte monocyte progenitor cell | 3.23e-26 | 67 |
myeloid leukocyte | 2.32e-24 | 72 |
immature conventional dendritic cell | 1.57e-23 | 5 |
common dendritic progenitor | 1.57e-23 | 5 |
myeloid cell | 5.27e-16 | 108 |
common myeloid progenitor | 5.27e-16 | 108 |
conventional dendritic cell | 6.33e-16 | 8 |
nongranular leukocyte | 5.60e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.56e-14 | 120 |
dendritic cell | 3.79e-13 | 10 |
leukocyte | 1.59e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.00e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-10 | 161 |
hematopoietic stem cell | 6.02e-10 | 168 |
hematopoietic cell | 2.18e-09 | 177 |
defensive cell | 6.23e-08 | 48 |
phagocyte | 6.23e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.75e-23 | 76 |
bone element | 2.56e-21 | 82 |
skeletal element | 2.32e-19 | 90 |
immune system | 1.03e-18 | 93 |
hematopoietic system | 1.02e-17 | 98 |
blood island | 1.02e-17 | 98 |
skeletal system | 2.38e-17 | 100 |
hemolymphoid system | 5.27e-16 | 108 |
musculoskeletal system | 4.91e-12 | 167 |
lateral plate mesoderm | 4.82e-08 | 203 |