FFCP PHASE1:Hg19::chr10:105314750..105314761,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:105314750..105314761,- | |||
|description=CAGE_peak_at_chr10:105314750..105314761,- | |||
|id=chr10:105314750..105314761,- | |||
|ontology_enrichment_celltype=CL:0002057!2.19e-51!42;CL:0000860!2.61e-47!45;CL:0000766!3.13e-31!76;CL:0002194!2.03e-30!63;CL:0000576!2.03e-30!63;CL:0000040!2.03e-30!63;CL:0000559!2.03e-30!63;CL:0000839!2.47e-30!70;CL:0000557!8.95e-30!71;CL:0002009!3.28e-29!65;CL:0000763!5.01e-18!112;CL:0000049!5.01e-18!112;CL:0002393!2.96e-17!9;CL:0002397!2.96e-17!9;CL:0000738!1.54e-16!140;CL:0002087!2.78e-16!119;CL:0002031!3.82e-14!124;CL:0000037!1.48e-11!172;CL:0000566!1.48e-11!172;CL:0000988!2.23e-10!182;CL:0002032!5.12e-10!165;CL:0000837!5.12e-10!165;CL:0000875!5.22e-08!3;CL:0002396!5.22e-08!3;CL:0000842!1.58e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.75e-23;6!CL:0002397;1.75e-23;6!CL:0000860;1.49e-19;33!CL:0002057;1.49e-19;33!CL:0000576;9.12e-17;48!CL:0000766;5.28e-16;69!CL:0000473;1.01e-15;39!CL:0000234;1.01e-15;39!CL:0000763;2.73e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.98e-35,42;CL:0002057,2.98e-35,42;CL:0000473,9.34e-31,48;CL:0000234,9.34e-31,48;CL:0002194,1.88e-24,59;CL:0000576,1.88e-24,59;CL:0000040,1.88e-24,59;CL:0000559,1.88e-24,59;CL:0000766,3.37e-24,72;CL:0002009,1.23e-23,61;CL:0000839,8.18e-22,66;CL:0000557,1.76e-21,67;CL:0000763,6.77e-16,108;CL:0000049,6.77e-16,108;CL:0002393,8.59e-16,9;CL:0002397,8.59e-16,9;CL:0000738,1.94e-12,136;CL:0002087,3.17e-12,115;CL:0002031,1.11e-11,120;CL:0002032,2.37e-10,161;CL:0000837,2.37e-10,161;CL:0000037,7.06e-10,168;CL:0000988,2.54e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.27e-25!80;UBERON:0002390!2.31e-23!102;UBERON:0003061!2.31e-23!102;UBERON:0001474!5.97e-23!86;UBERON:0002193!2.33e-20!112;UBERON:0004765!3.58e-18!101;UBERON:0001434!3.58e-18!101;UBERON:0002405!6.60e-16!115;UBERON:0001869!1.17e-13!32;UBERON:0001049!2.54e-13!57;UBERON:0005068!2.54e-13!57;UBERON:0006241!2.54e-13!57;UBERON:0007135!2.54e-13!57;UBERON:0002780!6.14e-13!41;UBERON:0001890!6.14e-13!41;UBERON:0006240!6.14e-13!41;UBERON:0002616!1.09e-12!59;UBERON:0002020!1.11e-12!34;UBERON:0003528!1.11e-12!34;UBERON:0001893!1.19e-12!34;UBERON:0003080!1.56e-12!42;UBERON:0002619!7.05e-12!22;UBERON:0002791!1.68e-11!33;UBERON:0001950!4.53e-11!20;UBERON:0000956!3.41e-10!25;UBERON:0000203!3.41e-10!25;UBERON:0000955!7.18e-10!69;UBERON:0006238!7.18e-10!69;UBERON:0003056!1.73e-08!61;UBERON:0002346!2.69e-08!90;UBERON:0002204!3.04e-08!167;UBERON:0003075!4.99e-08!86;UBERON:0007284!4.99e-08!86;UBERON:0005743!7.08e-08!86;UBERON:0001017!1.54e-07!82;UBERON:0000062!2.38e-07!511;UBERON:0003081!3.58e-07!216;UBERON:0007023!8.09e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.13e-19,76;UBERON:0001474,1.90e-17,82;UBERON:0004765,7.77e-16,90;UBERON:0002405,2.66e-15,93;UBERON:0002390,1.75e-14,98;UBERON:0003061,1.75e-14,98;UBERON:0001434,3.53e-14,100;UBERON:0002193,4.53e-13,108;UBERON:0002204,3.94e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,1.40381113229099,0,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.929716147622738,0,0.619412741790207,0.575384784644301,0.512321413058201,0.945928919554341,1.03423704220986,1.93645405075148,1.35426486594342,1.12945403725563,0.818718450173537,1.57306439111559,1.53041946185451,0.641858054152187,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0.868755378820466,0,1.84138817993782,0.316462387440884,1.47878700418359,0.425208599930087,0.628975936525128,0.44931452458598,0,0,0.570025487482497,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,3.31737779793674,0.591095237907095,0,0,0.139423744278603,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,1.58186518546373,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0.138314504928436,0,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:105314750..105314761,- | |||
}} |
Latest revision as of 10:00, 23 July 2015
Short description: | p@chr10:105314750..105314761, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105314750..105314761, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.98e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-35 | 42 |
defensive cell | 9.34e-31 | 48 |
phagocyte | 9.34e-31 | 48 |
monopoietic cell | 1.88e-24 | 59 |
monocyte | 1.88e-24 | 59 |
monoblast | 1.88e-24 | 59 |
promonocyte | 1.88e-24 | 59 |
myeloid leukocyte | 3.37e-24 | 72 |
macrophage dendritic cell progenitor | 1.23e-23 | 61 |
myeloid lineage restricted progenitor cell | 8.18e-22 | 66 |
granulocyte monocyte progenitor cell | 1.76e-21 | 67 |
myeloid cell | 6.77e-16 | 108 |
common myeloid progenitor | 6.77e-16 | 108 |
intermediate monocyte | 8.59e-16 | 9 |
CD14-positive, CD16-positive monocyte | 8.59e-16 | 9 |
leukocyte | 1.94e-12 | 136 |
nongranular leukocyte | 3.17e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.11e-11 | 120 |
hematopoietic oligopotent progenitor cell | 2.37e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-10 | 161 |
hematopoietic stem cell | 7.06e-10 | 168 |
hematopoietic cell | 2.54e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.13e-19 | 76 |
bone element | 1.90e-17 | 82 |
skeletal element | 7.77e-16 | 90 |
immune system | 2.66e-15 | 93 |
hematopoietic system | 1.75e-14 | 98 |
blood island | 1.75e-14 | 98 |
skeletal system | 3.53e-14 | 100 |
hemolymphoid system | 4.53e-13 | 108 |
musculoskeletal system | 3.94e-08 | 167 |