FFCP PHASE1:Hg19::chr10:105314750..105314761,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105314750..105314761,- | |||
|description=CAGE_peak_at_chr10:105314750..105314761,- | |description=CAGE_peak_at_chr10:105314750..105314761,- | ||
|id=chr10:105314750..105314761,- | |id=chr10:105314750..105314761,- | ||
|ontology_enrichment_celltype=CL:0002057!2.19e-51!42;CL:0000860!2.61e-47!45;CL:0000766!3.13e-31!76;CL:0002194!2.03e-30!63;CL:0000576!2.03e-30!63;CL:0000040!2.03e-30!63;CL:0000559!2.03e-30!63;CL:0000839!2.47e-30!70;CL:0000557!8.95e-30!71;CL:0002009!3.28e-29!65;CL:0000763!5.01e-18!112;CL:0000049!5.01e-18!112;CL:0002393!2.96e-17!9;CL:0002397!2.96e-17!9;CL:0000738!1.54e-16!140;CL:0002087!2.78e-16!119;CL:0002031!3.82e-14!124;CL:0000037!1.48e-11!172;CL:0000566!1.48e-11!172;CL:0000988!2.23e-10!182;CL:0002032!5.12e-10!165;CL:0000837!5.12e-10!165;CL:0000875!5.22e-08!3;CL:0002396!5.22e-08!3;CL:0000842!1.58e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.19e-51!42;CL:0000860!2.61e-47!45;CL:0000766!3.13e-31!76;CL:0002194!2.03e-30!63;CL:0000576!2.03e-30!63;CL:0000040!2.03e-30!63;CL:0000559!2.03e-30!63;CL:0000839!2.47e-30!70;CL:0000557!8.95e-30!71;CL:0002009!3.28e-29!65;CL:0000763!5.01e-18!112;CL:0000049!5.01e-18!112;CL:0002393!2.96e-17!9;CL:0002397!2.96e-17!9;CL:0000738!1.54e-16!140;CL:0002087!2.78e-16!119;CL:0002031!3.82e-14!124;CL:0000037!1.48e-11!172;CL:0000566!1.48e-11!172;CL:0000988!2.23e-10!182;CL:0002032!5.12e-10!165;CL:0000837!5.12e-10!165;CL:0000875!5.22e-08!3;CL:0002396!5.22e-08!3;CL:0000842!1.58e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.75e-23;6!CL:0002397;1.75e-23;6!CL:0000860;1.49e-19;33!CL:0002057;1.49e-19;33!CL:0000576;9.12e-17;48!CL:0000766;5.28e-16;69!CL:0000473;1.01e-15;39!CL:0000234;1.01e-15;39!CL:0000763;2.73e-07;100 | |ontology_enrichment_celltype_v019=CL:0002393;1.75e-23;6!CL:0002397;1.75e-23;6!CL:0000860;1.49e-19;33!CL:0002057;1.49e-19;33!CL:0000576;9.12e-17;48!CL:0000766;5.28e-16;69!CL:0000473;1.01e-15;39!CL:0000234;1.01e-15;39!CL:0000763;2.73e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.98e-35,42;CL:0002057,2.98e-35,42;CL:0000473,9.34e-31,48;CL:0000234,9.34e-31,48;CL:0002194,1.88e-24,59;CL:0000576,1.88e-24,59;CL:0000040,1.88e-24,59;CL:0000559,1.88e-24,59;CL:0000766,3.37e-24,72;CL:0002009,1.23e-23,61;CL:0000839,8.18e-22,66;CL:0000557,1.76e-21,67;CL:0000763,6.77e-16,108;CL:0000049,6.77e-16,108;CL:0002393,8.59e-16,9;CL:0002397,8.59e-16,9;CL:0000738,1.94e-12,136;CL:0002087,3.17e-12,115;CL:0002031,1.11e-11,120;CL:0002032,2.37e-10,161;CL:0000837,2.37e-10,161;CL:0000037,7.06e-10,168;CL:0000988,2.54e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-24;42 | |ontology_enrichment_development_v019=CL:0002057;2.07e-24;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.13e-19,76;UBERON:0001474,1.90e-17,82;UBERON:0004765,7.77e-16,90;UBERON:0002405,2.66e-15,93;UBERON:0002390,1.75e-14,98;UBERON:0003061,1.75e-14,98;UBERON:0001434,3.53e-14,100;UBERON:0002193,4.53e-13,108;UBERON:0002204,3.94e-08,167 | |||
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|short_description=p@chr10:105314750..105314761,- | |short_description=p@chr10:105314750..105314761,- | ||
}} | }} |
Latest revision as of 10:00, 23 July 2015
Short description: | p@chr10:105314750..105314761, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105314750..105314761, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.98e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-35 | 42 |
defensive cell | 9.34e-31 | 48 |
phagocyte | 9.34e-31 | 48 |
monopoietic cell | 1.88e-24 | 59 |
monocyte | 1.88e-24 | 59 |
monoblast | 1.88e-24 | 59 |
promonocyte | 1.88e-24 | 59 |
myeloid leukocyte | 3.37e-24 | 72 |
macrophage dendritic cell progenitor | 1.23e-23 | 61 |
myeloid lineage restricted progenitor cell | 8.18e-22 | 66 |
granulocyte monocyte progenitor cell | 1.76e-21 | 67 |
myeloid cell | 6.77e-16 | 108 |
common myeloid progenitor | 6.77e-16 | 108 |
intermediate monocyte | 8.59e-16 | 9 |
CD14-positive, CD16-positive monocyte | 8.59e-16 | 9 |
leukocyte | 1.94e-12 | 136 |
nongranular leukocyte | 3.17e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.11e-11 | 120 |
hematopoietic oligopotent progenitor cell | 2.37e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-10 | 161 |
hematopoietic stem cell | 7.06e-10 | 168 |
hematopoietic cell | 2.54e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.13e-19 | 76 |
bone element | 1.90e-17 | 82 |
skeletal element | 7.77e-16 | 90 |
immune system | 2.66e-15 | 93 |
hematopoietic system | 1.75e-14 | 98 |
blood island | 1.75e-14 | 98 |
skeletal system | 3.53e-14 | 100 |
hemolymphoid system | 4.53e-13 | 108 |
musculoskeletal system | 3.94e-08 | 167 |