FFCP PHASE1:Hg19::chr10:104403609..104403633,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104403609..104403633,+ | |||
|description=CAGE_peak_at_chr10:104403609..104403633,+ | |description=CAGE_peak_at_chr10:104403609..104403633,+ | ||
|id=chr10:104403609..104403633,+ | |id=chr10:104403609..104403633,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.35e-08!76 | |ontology_enrichment_celltype=CL:0000766!1.35e-08!76 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.98e-11,72;CL:0000557,2.87e-07,67;CL:0000839,6.85e-07,66 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-17!115;UBERON:0003081!6.21e-12!216;UBERON:0000025!7.23e-12!194;UBERON:0001049!2.08e-09!57;UBERON:0005068!2.08e-09!57;UBERON:0006241!2.08e-09!57;UBERON:0007135!2.08e-09!57;UBERON:0004111!1.64e-08!241;UBERON:0000922!3.83e-07!612;UBERON:0002020!3.91e-07!34;UBERON:0003528!3.91e-07!34;UBERON:0003075!8.75e-07!86;UBERON:0007284!8.75e-07!86;UBERON:0002050!9.37e-07!605;UBERON:0005423!9.37e-07!605 | |ontology_enrichment_uberon=UBERON:0007023!1.65e-17!115;UBERON:0003081!6.21e-12!216;UBERON:0000025!7.23e-12!194;UBERON:0001049!2.08e-09!57;UBERON:0005068!2.08e-09!57;UBERON:0006241!2.08e-09!57;UBERON:0007135!2.08e-09!57;UBERON:0004111!1.64e-08!241;UBERON:0000922!3.83e-07!612;UBERON:0002020!3.91e-07!34;UBERON:0003528!3.91e-07!34;UBERON:0003075!8.75e-07!86;UBERON:0007284!8.75e-07!86;UBERON:0002050!9.37e-07!605;UBERON:0005423!9.37e-07!605 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.04e-17,114;UBERON:0003081,6.53e-13,203;UBERON:0000025,8.05e-11,192;UBERON:0001049,2.33e-10,56;UBERON:0005068,2.33e-10,56;UBERON:0006241,2.33e-10,56;UBERON:0007135,2.33e-10,56;UBERON:0000926,7.69e-10,315;UBERON:0004120,7.69e-10,315;UBERON:0006603,7.69e-10,315;UBERON:0000073,3.40e-09,53;UBERON:0002616,3.40e-09,53;UBERON:0010314,2.61e-08,132;UBERON:0003528,6.80e-08,34;UBERON:0002020,6.80e-08,34;UBERON:0004111,3.29e-07,240;UBERON:0001893,3.47e-07,34;UBERON:0002371,3.69e-07,76;UBERON:0003075,5.77e-07,82;UBERON:0007284,5.77e-07,82;UBERON:0002791,5.94e-07,32;UBERON:0002780,7.63e-07,41;UBERON:0001890,7.63e-07,41;UBERON:0003080,7.63e-07,41;UBERON:0006240,7.63e-07,41;UBERON:0002390,9.92e-07,98;UBERON:0003061,9.92e-07,98 | |||
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| ||
|short_description=p@chr10:104403609..104403633,+ | |short_description=p@chr10:104403609..104403633,+ | ||
}} | }} |
Latest revision as of 09:51, 23 July 2015
Short description: | p@chr10:104403609..104403633, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104403609..104403633, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.98e-11 | 72 |
granulocyte monocyte progenitor cell | 2.87e-07 | 67 |
myeloid lineage restricted progenitor cell | 6.85e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.04e-17 | 114 |
lateral plate mesoderm | 6.53e-13 | 203 |
tube | 8.05e-11 | 192 |
neural tube | 2.33e-10 | 56 |
neural rod | 2.33e-10 | 56 |
future spinal cord | 2.33e-10 | 56 |
neural keel | 2.33e-10 | 56 |
mesoderm | 7.69e-10 | 315 |
mesoderm-derived structure | 7.69e-10 | 315 |
presumptive mesoderm | 7.69e-10 | 315 |
regional part of nervous system | 3.40e-09 | 53 |
regional part of brain | 3.40e-09 | 53 |
structure with developmental contribution from neural crest | 2.61e-08 | 132 |
brain grey matter | 6.80e-08 | 34 |
gray matter | 6.80e-08 | 34 |
anatomical conduit | 3.29e-07 | 240 |
telencephalon | 3.47e-07 | 34 |
bone marrow | 3.69e-07 | 76 |
neural plate | 5.77e-07 | 82 |
presumptive neural plate | 5.77e-07 | 82 |
regional part of telencephalon | 5.94e-07 | 32 |
regional part of forebrain | 7.63e-07 | 41 |
forebrain | 7.63e-07 | 41 |
anterior neural tube | 7.63e-07 | 41 |
future forebrain | 7.63e-07 | 41 |
hematopoietic system | 9.92e-07 | 98 |
blood island | 9.92e-07 | 98 |