FFCP PHASE1:Hg19::chr10:104338730..104338756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104338730..104338756,+ | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_at_chr10:104338730..104338756,+ | |description=CAGE_peak_at_chr10:104338730..104338756,+ | ||
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|ontology_enrichment_celltype=CL:0000840!4.91e-29!5;CL:0001029!4.91e-29!5;CL:0000990!1.81e-19!8;CL:0000451!5.58e-16!10;CL:0000557!1.41e-08!71;CL:0002009!2.67e-07!65 | |ontology_enrichment_celltype=CL:0000840!4.91e-29!5;CL:0001029!4.91e-29!5;CL:0000990!1.81e-19!8;CL:0000451!5.58e-16!10;CL:0000557!1.41e-08!71;CL:0002009!2.67e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000840;8.14e-60;5!CL:0000990;2.91e-40;8!CL:0000451;3.85e-33;10!CL:0000235;4.06e-27;6 | |ontology_enrichment_celltype_v019=CL:0000840;8.14e-60;5!CL:0000990;2.91e-40;8!CL:0000451;3.85e-33;10!CL:0000235;4.06e-27;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000840,8.15e-60,5;CL:0001029,8.15e-60,5;CL:0000990,2.91e-40,8;CL:0000451,3.85e-33,10;CL:0000235,4.06e-27,6;CL:0002194,4.10e-17,59;CL:0000576,4.10e-17,59;CL:0000040,4.10e-17,59;CL:0000559,4.10e-17,59;CL:0002009,1.38e-16,61;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002581!1.47e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0001950!4.68e-08!20;UBERON:0002371!1.62e-07!80;UBERON:0002619!2.27e-07!22;UBERON:0004765!2.64e-07!101;UBERON:0001434!2.64e-07!101;UBERON:0002390!3.44e-07!102;UBERON:0003061!3.44e-07!102;UBERON:0001474!6.22e-07!86 | |ontology_enrichment_uberon=UBERON:0002581!1.47e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0001950!4.68e-08!20;UBERON:0002371!1.62e-07!80;UBERON:0002619!2.27e-07!22;UBERON:0004765!2.64e-07!101;UBERON:0001434!2.64e-07!101;UBERON:0002390!3.44e-07!102;UBERON:0003061!3.44e-07!102;UBERON:0001474!6.22e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
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|short_description=p@chr10:104338730..104338756,+ | |short_description=p@chr10:104338730..104338756,+ | ||
}} | }} |
Latest revision as of 09:50, 23 July 2015
Short description: | p@chr10:104338730..104338756, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104338730..104338756, + |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 8.15e-60 | 5 |
common dendritic progenitor | 8.15e-60 | 5 |
conventional dendritic cell | 2.91e-40 | 8 |
dendritic cell | 3.85e-33 | 10 |
macrophage | 4.06e-27 | 6 |
monopoietic cell | 4.10e-17 | 59 |
monocyte | 4.10e-17 | 59 |
monoblast | 4.10e-17 | 59 |
promonocyte | 4.10e-17 | 59 |
macrophage dendritic cell progenitor | 1.38e-16 | 61 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
nongranular leukocyte | 3.65e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |