FF:10101-102D3: Difference between revisions
From FANTOM5_SSTAR
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|creation_date= | |creation_date= | ||
|data_phase=2 | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |expression_enrichment_score= | ||
| Line 38: | Line 39: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|id= | |id=FF:10101-102D3 | ||
|is_a=EFO:0001461;;FF:0011374 | |is_a=EFO:0001461;;FF:0011374 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id_phase_based=2: | |library_id= | ||
|name= | |library_id_phase_based=2: | ||
|name=whole body, embryo E17.5, pool1 (internal control) | |||
|namespace= | |namespace= | ||
|part_of= | |part_of= | ||
| Line 49: | Line 51: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|rna_box= | |rna_box=102 | ||
|rna_catalog_number= | |rna_catalog_number=NA | ||
|rna_concentration= | |rna_concentration=109 | ||
|rna_extraction_protocol= | |rna_extraction_protocol=1 | ||
|rna_lot_number= | |rna_lot_number=NA | ||
|rna_od260/230= | |rna_od260/230=2.1 | ||
|rna_od260/280= | |rna_od260/280=2 | ||
|rna_position= | |rna_position=D3 | ||
|rna_rin= | |rna_rin=8.5 | ||
|rna_sample_type= | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=102D3 | ||
|rna_weight_ug= | |rna_weight_ug=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | ||
|sample_age= | |sample_age= | ||
|sample_cell_catalog= | |sample_category=tissues | ||
|sample_cell_catalog=NA | |||
|sample_cell_line= | |sample_cell_line= | ||
|sample_cell_lot= | |sample_cell_lot=NA | ||
|sample_cell_type= | |sample_cell_type=CELL MIXTURE - tissue sample | ||
|sample_collaboration= | |sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest) | ||
|sample_company= | |sample_company=NA | ||
|sample_description= | |sample_description= | ||
|sample_dev_stage= | |sample_dev_stage=17.5 days embryo | ||
|sample_disease= | |sample_disease=normal | ||
|sample_donor(cell lot)= | |sample_donor(cell lot)= | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_id= | |sample_id=10101 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex= | ||
|sample_species= | |sample_species= | ||
|sample_strain= | |sample_strain=C57BL/6J | ||
|sample_tissue= | |sample_tissue=whole body | ||
|top_motifs= | |top_motifs= | ||
|xref= | |xref= | ||
}} | }} | ||
Revision as of 09:32, 28 November 2014
| Name: | whole body, embryo E17.5, pool1 (internal control) |
|---|---|
| Species: | |
| Library ID: | |
| Sample type: | tissues |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
|
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0001461 control
FF:0011374 mouse whole body- embryo E17.5 sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000301 (mouse embryonic day 17.5 sample)
0011374 (mouse whole body- embryo E17.5 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
FF:0000294 (mouse embryonic day 11 sample)
