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{{UBERON
{{UBERON
|id=UBERON:0011137
|alt_id=
|name=axial skeletal system
|namespace=
|def="Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm]
|xref=FMA:7483
|is_a=UBERON:0000075
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0011137
|is_a=UBERON:0000075
|is_obsolete=
|located_in=
|located_in=
|name=axial skeletal system
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:7483
}}
}}

Latest revision as of 18:10, 12 September 2014

Name:axial skeletal system
Namespace:FANTOM
Definition:"Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm]
Xrefs:
links:
FMA:7483

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000075(subdivision of skeletal system)



Children

part of:UBERON:0002328 (notochord),UBERON:0010323 (cranial skeletal system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011137 (axial skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_88219e40f6759d4b740fc1dfc61e6e3ap10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:103146966..103146971, -
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_88219e40f6759d4b740fc1dfc61e6e3ap5@Fer1l6
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tecta
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_88219e40f6759d4b740fc1dfc61e6e3ap7@Glt25d2
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr4:130461150..130461185, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_88219e40f6759d4b740fc1dfc61e6e3ap6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_88219e40f6759d4b740fc1dfc61e6e3ap10@Otof
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_88219e40f6759d4b740fc1dfc61e6e3ap6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:128881546..128881553, -
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_88219e40f6759d4b740fc1dfc61e6e3ap9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_88219e40f6759d4b740fc1dfc61e6e3ap1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_88219e40f6759d4b740fc1dfc61e6e3ap4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_88219e40f6759d4b740fc1dfc61e6e3ap5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_88219e40f6759d4b740fc1dfc61e6e3ap10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_88219e40f6759d4b740fc1dfc61e6e3ap21@Espn
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_88219e40f6759d4b740fc1dfc61e6e3ap21@Espn
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_88219e40f6759d4b740fc1dfc61e6e3ap15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_88219e40f6759d4b740fc1dfc61e6e3ap13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:58626291..58626298, -
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:13508046..13508055, +
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:81012915..81012923, +
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr12:13508046..13508055, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_88219e40f6759d4b740fc1dfc61e6e3ap2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_88219e40f6759d4b740fc1dfc61e6e3ap10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_88219e40f6759d4b740fc1dfc61e6e3ap7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_88219e40f6759d4b740fc1dfc61e6e3ap7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_88219e40f6759d4b740fc1dfc61e6e3ap7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:100724698..100724706, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_88219e40f6759d4b740fc1dfc61e6e3ap1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_88219e40f6759d4b740fc1dfc61e6e3ap6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_88219e40f6759d4b740fc1dfc61e6e3ap4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_88219e40f6759d4b740fc1dfc61e6e3ap3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_88219e40f6759d4b740fc1dfc61e6e3ap2@Strc
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_88219e40f6759d4b740fc1dfc61e6e3ap@chr15:89215319..89215330, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_88219e40f6759d4b740fc1dfc61e6e3ap@chr1:172843796..172843799, -

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