UBERON:0010742: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0010742
|name=bone of pelvic complex
|namespace=
|def="A bone that is part of a pelvic complex. Examples: pubis, ischium, fot phalanx, any tarsal bone,...") |
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=Note that the MA class called 'hindlimb bone' belongs here, as it includes bones in the pelvic girdle | |comment=Note that the MA class called 'hindlimb bone' belongs here, as it includes bones in the pelvic girdle | ||
|created_by= | |created_by= | ||
| | |def="A bone that is part of a pelvic complex. Examples: pubis, ischium, fot phalanx, any tarsal bone, any bone of the pelvic fin or girdle." [UBERON:cjm, UBERONREF:0000003] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0010742 | |||
|is_a=UBERON:0010740 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=bone of pelvic complex | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0010709;;UBERON:0002091;;UBERON:0010709 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="hindlimb bone" RELATED [MA:0000660, UBERONREF:0000003] | ||
|union_of= | |||
|xref=MA:0000660 | |||
}} | }} | ||
Latest revision as of 18:09, 12 September 2014
| Name: | bone of pelvic complex | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A bone that is part of a pelvic complex. Examples: pubis, ischium, fot phalanx, any tarsal bone, any bone of the pelvic fin or girdle." [UBERON:cjm, UBERONREF:0000003] | ||
| Xrefs: |
| ||
| Synonyms: | "hindlimb bone" RELATED [MA:0000660, UBERONREF:0000003] | ||
| Comments: | Note that the MA class called 'hindlimb bone' belongs here, as it includes bones in the pelvic girdle |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0010740(bone of appendage girdle complex) |
|---|---|
| part_of: | UBERON:0010709(pelvic complex),UBERON:0002091(appendicular skeleton),UBERON:0010709(pelvic complex) |
Children
| is a: | UBERON:0003464 (hindlimb bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1350-25C3 (bone (os femoris), neonate N20)
- 1525-43A6 (bone (os femoris), neonate N16)
- 1985-43F5 (bone (os femoris), neonate N02)
- 56-12G2 (bone (os femoris), adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010742 (bone of pelvic complex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.4e-49 | FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_4c7565a562a028c676aac7fa47c24fa9 | p26@Myo18a |
| 3.4e-49 | FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_4c7565a562a028c676aac7fa47c24fa9 | p26@Myo18a |
| 4.96e-49 | FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_c143ff91af857415abb0d9293717a3c9 | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_c143ff91af857415abb0d9293717a3c9 | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_c143ff91af857415abb0d9293717a3c9 | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_c143ff91af857415abb0d9293717a3c9 | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_c143ff91af857415abb0d9293717a3c9 | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_c143ff91af857415abb0d9293717a3c9 | p@chr2:32482372..32482381, + |
| 3.15e-44 | FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_6e7314186a783a6206305d51a1cbf737 | p@chr6:51525810..51525817, + |
| 3.15e-44 | FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_6e7314186a783a6206305d51a1cbf737 | p@chr6:51525810..51525817, + |
| 9.78e-40 | FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_1d4d6d2998463ce9e5f0012bc5107c13 | p@chr19:4876870..4876880, - |
| 9.78e-40 | FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_1d4d6d2998463ce9e5f0012bc5107c13 | p@chr19:4876870..4876880, - |
| 1.15e-39 | FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_14112546901e8e065e6539015285a4d6 | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_14112546901e8e065e6539015285a4d6 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_14112546901e8e065e6539015285a4d6 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_14112546901e8e065e6539015285a4d6 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_14112546901e8e065e6539015285a4d6 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_14112546901e8e065e6539015285a4d6 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_14112546901e8e065e6539015285a4d6 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_14112546901e8e065e6539015285a4d6 | p@chr1:174140324..174140335, - |
| 1.55e-39 | FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_c6aebc257d317f23fe53b385dff7c9c9 | p@chr1:174143249..174143260, - |
| 1.55e-39 | FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_c6aebc257d317f23fe53b385dff7c9c9 | p@chr1:174143249..174143260, - |
| 3.03e-39 | FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_a1e27f421d9993169fb20cca18b2c28c | p@chr6:51525869..51525891, + |
| 3.03e-39 | FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_a1e27f421d9993169fb20cca18b2c28c | p@chr6:51525869..51525891, + |
| 9.31e-39 | FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_21b91b9a29457ccfd733e572a14adbeb | p3@Asb16 |
| 9.31e-39 | FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_21b91b9a29457ccfd733e572a14adbeb | p3@Asb16 |
| 2.41e-35 | FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_b45423e3d29dc30e0272fdf4fb8b09d0 | p@chr7:133604286..133604297, - |
| 2.41e-35 | FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_b45423e3d29dc30e0272fdf4fb8b09d0 | p@chr7:133604286..133604297, - |
| 2.95e-35 | FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_7a0e1787c48e54de872ad9b6e8603ac1 | p5@Pla2g5 |
| 2.95e-35 | FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_7a0e1787c48e54de872ad9b6e8603ac1 | p5@Pla2g5 |
| 9.53e-34 | FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_f7b23a16a44df7f8d1286e07199093e8 | p2@uc009mdq.1 |
| 9.53e-34 | FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_f7b23a16a44df7f8d1286e07199093e8 | p2@uc009mdq.1 |
| 1.23e-33 | FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_903216079decfdac1ee5d39fb79d0003 | p3@Mmp9 |
| 1.23e-33 | FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_903216079decfdac1ee5d39fb79d0003 | p3@Mmp9 |
| 1.58e-33 | FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_8af96dede6f168582d2a4ed6b89dc174 | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_8af96dede6f168582d2a4ed6b89dc174 | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_8af96dede6f168582d2a4ed6b89dc174 | p@chr1:166815111..166815121, - |
| 1.58e-33 | FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_8af96dede6f168582d2a4ed6b89dc174 | p@chr1:166815111..166815121, - |
| 2.04e-33 | FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_057f23d58537348af51cad0e63acbe21 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_057f23d58537348af51cad0e63acbe21 | p4@Lipc |
| 2.04e-33 | FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_057f23d58537348af51cad0e63acbe21 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_057f23d58537348af51cad0e63acbe21 | p4@Lipc |
| 3.38e-33 | FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_47a2e7a3acad8fde5af98f6c20440f17 | p6@Sp7 |
| 3.38e-33 | FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_47a2e7a3acad8fde5af98f6c20440f17 | p6@Sp7 |
| 7.17e-33 | FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_6b328610df57b1492a734dce9f55c774 | p@chr18:76271498..76271508, + |
| 7.17e-33 | FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_6b328610df57b1492a734dce9f55c774 | p@chr18:76271498..76271508, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_6b328610df57b1492a734dce9f55c774 | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_6b328610df57b1492a734dce9f55c774 | p@chr8:126415826..126415839, + |
| 2.67e-30 | FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_2c5493be74b4991d963508b39e411cb7 | p@chr2:32482387..32482399, + |
| 2.67e-30 | FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_2c5493be74b4991d963508b39e411cb7 | p@chr2:32482387..32482399, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_61183e2557ce9b37d8c26cfc9defe729 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_61183e2557ce9b37d8c26cfc9defe729 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_61183e2557ce9b37d8c26cfc9defe729 | p@chr15:58649683..58649688, - |
| 1.1e-29 | FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_61183e2557ce9b37d8c26cfc9defe729 | p@chr15:58649683..58649688, - |
| 1.46e-29 | FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_6b1a3a3d3e0218dea9a365ffc12855ba | p@chr7:133590998..133591009, - |
| 1.46e-29 | FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_6b1a3a3d3e0218dea9a365ffc12855ba | p@chr7:133590998..133591009, - |
| 1.73e-29 | FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_0364988b1715f2a674ce7790cfc75d4c | p2@Myoz3 |
| 1.73e-29 | FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_0364988b1715f2a674ce7790cfc75d4c | p2@Myoz3 |
| 2.42e-29 | FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_c86539f405fa89081d10024c8232edcb | p2@Myh4 |
| 2.42e-29 | FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_c86539f405fa89081d10024c8232edcb | p2@Myh4 |
| 7.46e-29 | FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_8c6a54cdcaf1e4068f3cc0d72c3d6154 | p@chr1:57155729..57155740, - |
| 7.46e-29 | FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_8c6a54cdcaf1e4068f3cc0d72c3d6154 | p@chr1:57155729..57155740, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_4c1ef8286f88d98a937acf2018884089 | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_4c1ef8286f88d98a937acf2018884089 | p1@Msmp |
| 9.26e-29 | FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_4c1ef8286f88d98a937acf2018884089 | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_4c1ef8286f88d98a937acf2018884089 | p1@Msmp |
| 1.15e-28 | FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_5be37db48d5771d8fef92bfa02d40c82 | p@chrY:2858251..2858257, + |
| 1.15e-28 | FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_5be37db48d5771d8fef92bfa02d40c82 | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_5be37db48d5771d8fef92bfa02d40c82 | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_5be37db48d5771d8fef92bfa02d40c82 | p@chrY:2858251..2858257, + |
| 1.43e-28 | FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_fa9732815dd341b6a5573a3ba4bbf2e2 | p@chr6:34436258..34436292, + |
| 1.43e-28 | FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_fa9732815dd341b6a5573a3ba4bbf2e2 | p@chr6:34436258..34436292, + |
| 2.2e-28 | FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_89675832a7cc7fe579aefe39ca86c593 | p@chr11:67069796..67069817, - |
| 2.2e-28 | FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_89675832a7cc7fe579aefe39ca86c593 | p@chr11:67069796..67069817, - |
| 2.72e-28 | FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_a23946343a7573998c6885213dcdac68 | p@chr8:107702369..107702386, + |
| 2.72e-28 | FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_a23946343a7573998c6885213dcdac68 | p@chr8:107702369..107702386, + |
| 3.45e-28 | FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_c51d5fa02b5eb01e312926cdeecbea3a | p1@Siglec15 |
| 3.45e-28 | FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_c51d5fa02b5eb01e312926cdeecbea3a | p1@Siglec15 |
| 6.5e-28 | FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_637481e24141f6abc24948abd6848241 | p6@Atp2a1 |
| 6.5e-28 | FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_637481e24141f6abc24948abd6848241 | p6@Atp2a1 |
| 8.9e-28 | FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_0ff5a88b3d79ace1d8c2d133a0c6ee02 | p7@Atp2a1 |
| 8.9e-28 | FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_0ff5a88b3d79ace1d8c2d133a0c6ee02 | p7@Atp2a1 |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_6896544f642dac33e5efc94126e3150b | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_6896544f642dac33e5efc94126e3150b | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_6896544f642dac33e5efc94126e3150b | p@chr7:133592162..133592188, - |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_6896544f642dac33e5efc94126e3150b | p@chr7:133592162..133592188, - |
| 6.75e-27 | FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_c7bcdbd08f15b0854200da4ed00ea513 | p4@Sgca |
| 6.75e-27 | FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_c7bcdbd08f15b0854200da4ed00ea513 | p4@Sgca |
| 1.66e-26 | FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_98fefd4751a34470b9db715d8580fa36 | p1@Mepe |
| 1.66e-26 | FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_98fefd4751a34470b9db715d8580fa36 | p1@Mepe |
| 3.47e-26 | FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_54f15ffb163dd698ae0ef766db27378b | p2@Tm4sf19 |
| 3.47e-26 | FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_54f15ffb163dd698ae0ef766db27378b | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_54f15ffb163dd698ae0ef766db27378b | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_54f15ffb163dd698ae0ef766db27378b | p2@Tm4sf19 |
| 1.12e-25 | FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_41b28ffa08f9d6125a51e79ed2f246e8 | p5@Col11a2 |
| 1.12e-25 | FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_41b28ffa08f9d6125a51e79ed2f246e8 | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_41b28ffa08f9d6125a51e79ed2f246e8 | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_41b28ffa08f9d6125a51e79ed2f246e8 | p5@Col11a2 |
| 1.36e-25 | FFCP PHASE2:Mm9::chr2:180890942..180890956,-#_356645f344b63bdfa9ca63fdd02d4222 | p@chr2:180890942..180890956, - |
| 1.36e-25 | FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_356645f344b63bdfa9ca63fdd02d4222 | p@chr2:180890942..180890956, - |
