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{{UBERON
{{UBERON
|id=UBERON:0009617
|alt_id=
|name=head paraxial mesoderm
|namespace=
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|xref=EHDAA2:0000736;;EHDAA:364;;EMAPA:16171
|is_a=UBERON:0003104;;UBERON:0004120;;UBERON:0005291
|synonym="cephalic paraxial mesoderm" EXACT [UBERON:cjm];;"head paraxial mesenchyme" EXACT [EHDAA2:0000736]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=UBERON:0000926
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0009617
|is_a=UBERON:0006904
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=head paraxial mesoderm
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003077;;UBERON:0005253
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="cephalic paraxial mesoderm" EXACT [UBERON:cjm];;"head paraxial mesenchyme" EXACT [EHDAA2:0000736]
|union_of=
|xref=EHDAA2:0000736;;EHDAA:364;;EMAPA:16171
}}
}}

Latest revision as of 18:05, 12 September 2014

Name:head paraxial mesoderm
Namespace:FANTOM
Definition:"Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
Xrefs:
links:

EHDAA2:0000736
EHDAA:364

EMAPA:16171
Synonyms: "cephalic paraxial mesoderm" EXACT [UBERON:cjm]
"head paraxial mesenchyme" EXACT [EHDAA2:0000736]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006904(head mesenchyme from mesoderm)
develops_from:UBERON:0000926(mesoderm)
part_of:UBERON:0003077(paraxial mesoderm),UBERON:0005253(head mesenchyme)



Children

develops from:UBERON:0004761 (cartilaginous neurocranium),UBERON:0007647 (ectomeninx)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009617 (head paraxial mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_c6d67655ae3e8e9acffeefba96516e6ap21@Espn
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_c6d67655ae3e8e9acffeefba96516e6ap4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_c6d67655ae3e8e9acffeefba96516e6ap10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42206730..42206739, -
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_c6d67655ae3e8e9acffeefba96516e6ap7@Tecta
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_c6d67655ae3e8e9acffeefba96516e6ap@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_c6d67655ae3e8e9acffeefba96516e6ap7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_c6d67655ae3e8e9acffeefba96516e6ap7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_c6d67655ae3e8e9acffeefba96516e6ap6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:13508015..13508019, +
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Strc
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_c6d67655ae3e8e9acffeefba96516e6ap4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_c6d67655ae3e8e9acffeefba96516e6ap21@Espn
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_c6d67655ae3e8e9acffeefba96516e6ap5@Fer1l6
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_c6d67655ae3e8e9acffeefba96516e6ap15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_c6d67655ae3e8e9acffeefba96516e6ap13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_c6d67655ae3e8e9acffeefba96516e6ap5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr19:10536767..10536777, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:103146966..103146971, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr19:55256373..55256384, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_c6d67655ae3e8e9acffeefba96516e6ap15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_c6d67655ae3e8e9acffeefba96516e6ap4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_c6d67655ae3e8e9acffeefba96516e6ap3@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_c6d67655ae3e8e9acffeefba96516e6ap5@Otogl

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