UBERON:0007026: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0000925 | |develops_from=UBERON:0000925 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007026 | |||
|is_a=UBERON:0002050 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=primitive gut | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=BILA:0000084;;ncithesaurus:Primordial_Gut | |||
}} | }} |
Latest revision as of 18:00, 12 September 2014
Name: | primitive gut | ||
---|---|---|---|
Namespace: | FANTOM | ||
Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002050(embryonic structure) |
---|---|
develops_from: | UBERON:0000925(endoderm) |
Children
develops from: | UBERON:0000065 (respiratory tract),UBERON:0001555 (digestive tract) |
---|---|
part of: | UBERON:0000930 (stomodeum),UBERON:0000931 (proctodeum),UBERON:0003921 (pancreas primordium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007026 (primitive gut), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
4.99e-36 | FFCP PHASE1:Hg19::chr14:38064429..38064486,-#_7940b235b48b454a043eabb3dc9ea239 | p1@FOXA1 |
4.99e-36 | FFCP PHASE2:Hg19::chr14:38064429..38064486,-#_7940b235b48b454a043eabb3dc9ea239 | p1@FOXA1 |
1.61e-35 | FFCP PHASE2:Hg19::chr5:134369879..134369898,-#_b92abb05be197486afdb61252adf33d5 | p2@PITX1 |
1.61e-35 | FFCP PHASE1:Hg19::chr5:134369879..134369898,-#_b92abb05be197486afdb61252adf33d5 | p2@PITX1 |
1.29e-32 | FFCP PHASE2:Hg19::chr16:68269971..68270059,-#_18ce2f70ec49c84d105ea6c4ceb34700 | p1@ESRP2 |
1.29e-32 | FFCP PHASE1:Hg19::chr16:68269971..68270059,-#_18ce2f70ec49c84d105ea6c4ceb34700 | p1@ESRP2 |
4.79e-32 | FFCP PHASE1:Hg19::chr16:86542652..86542692,-#_7d3d1e2206b5f67f84fd0076cb46ded5 | p2@LOC400550 |
4.79e-32 | FFCP PHASE2:Hg19::chr16:86542652..86542692,-#_7d3d1e2206b5f67f84fd0076cb46ded5 | p2@LOC400550 |
9.87e-31 | FFCP PHASE1:Hg19::chr16:86532148..86532166,-#_ea38e7df525d3b09fd28098d6bc944d5 | p@chr16:86532148..86532166, - |
9.87e-31 | FFCP PHASE2:Hg19::chr16:86532148..86532166,-#_ea38e7df525d3b09fd28098d6bc944d5 | p@chr16:86532148..86532166, - |
1.01e-30 | FFCP PHASE1:Hg19::chr18:47721315..47721430,-#_adf989bca7da73c5eb93ec66c3345909 | p1@MYO5B |
1.01e-30 | FFCP PHASE2:Hg19::chr18:47721315..47721430,-#_adf989bca7da73c5eb93ec66c3345909 | p1@MYO5B |
1.18e-30 | FFCP PHASE2:Hg19::chr14:65409452..65409479,-#_185ca983cf4ebfd4e2b618cb450dc731 | p1@GPX2 |
1.18e-30 | FFCP PHASE1:Hg19::chr14:65409452..65409479,-#_185ca983cf4ebfd4e2b618cb450dc731 | p1@GPX2 |
5.14e-30 | FFCP PHASE1:Mm9::chr12:58646974..58647003,-#_95d99d1b327561581932e1e4f8e66cf2 | p1@Foxa1 |
5.14e-30 | FFCP PHASE2:Mm9::chr12:58646974..58647003,-#_95d99d1b327561581932e1e4f8e66cf2 | p1@Foxa1 |
5.76e-30 | FFCP PHASE1:Mm9::chr13:4190454..4190472,+#_9a323d49b10d277f4e253452e050286a | p2@Akr1c13 |
5.76e-30 | FFCP PHASE2:Mm9::chr13:4190454..4190472,+#_9a323d49b10d277f4e253452e050286a | p2@Akr1c13 |
1.52e-29 | FFCP PHASE2:Hg19::chr20:62168672..62168713,-#_2a399578712c948f0f16f06b33b2a401 | p1@PTK6 |
1.52e-29 | FFCP PHASE1:Hg19::chr20:62168672..62168713,-#_2a399578712c948f0f16f06b33b2a401 | p1@PTK6 |
4.1e-29 | FFCP PHASE1:Hg19::chr16:68260798..68260800,-#_7668a7711b10ea89d34825a1657cb4bf | p@chr16:68260798..68260800, - |
4.1e-29 | FFCP PHASE2:Hg19::chr16:68260798..68260800,-#_7668a7711b10ea89d34825a1657cb4bf | p@chr16:68260798..68260800, - |
6.23e-29 | FFCP PHASE2:Hg19::chr1:201979743..201979762,+#_9b3f7c93562a8ff2aa3d89e50c1c64c1 | p1@ELF3 |
6.23e-29 | FFCP PHASE1:Hg19::chr1:201979743..201979762,+#_9b3f7c93562a8ff2aa3d89e50c1c64c1 | p1@ELF3 |
7.64e-29 | FFCP PHASE1:Mm9::chr2:180976725..180976753,-#_c02c4e9752f2687758613990d54209fe | p2@BC006779 |
7.64e-29 | FFCP PHASE2:Mm9::chr2:180976725..180976753,-#_c02c4e9752f2687758613990d54209fe | p2@BC006779 |
1.66e-28 | FFCP PHASE1:Hg19::chr19:42212526..42212575,+#_3031cc81dfc66406b8cb8b5d2c7bf9a0 | p1@CEACAM5 |
1.66e-28 | FFCP PHASE2:Hg19::chr19:42212526..42212575,+#_3031cc81dfc66406b8cb8b5d2c7bf9a0 | p1@CEACAM5 |
2.87e-28 | FFCP PHASE2:Hg19::chr17:7164410..7164457,-#_1f8db2ecb839b2a916ba5b356c4fa8b4 | p3@CLDN7 |
2.87e-28 | FFCP PHASE1:Hg19::chr17:7164410..7164457,-#_1f8db2ecb839b2a916ba5b356c4fa8b4 | p3@CLDN7 |
7.57e-28 | FFCP PHASE1:Mm9::chr8:70018742..70018782,+#_19a5c2bb8a993862a1daebdcd373b20d | p1@Nat2 |
7.57e-28 | FFCP PHASE2:Mm9::chr8:70018742..70018782,+#_19a5c2bb8a993862a1daebdcd373b20d | p1@Nat2 |
1.1e-27 | FFCP PHASE1:Hg19::chr5:134369905..134369972,-#_e1a20096213a8ba66865c8b6d62d643c | p1@PITX1 |
1.1e-27 | FFCP PHASE2:Hg19::chr5:134369905..134369972,-#_e1a20096213a8ba66865c8b6d62d643c | p1@PITX1 |
1.82e-27 | FFCP PHASE2:Mm9::chr5:65194752..65194769,+#_472d1c0f27ef2505e1033e90861f95d3 | p1@Klf3 |
1.82e-27 | FFCP PHASE1:Mm9::chr5:65194752..65194769,+#_472d1c0f27ef2505e1033e90861f95d3 | p1@Klf3 |
3.7e-27 | FFCP PHASE1:Mm9::chr2:51828449..51828501,-#_abfd0e6ed2791c4db96027e12652fdda | p1@Nmi |
3.7e-27 | FFCP PHASE2:Mm9::chr2:51828449..51828501,-#_abfd0e6ed2791c4db96027e12652fdda | p1@Nmi |
3.88e-27 | FFCP PHASE1:Hg19::chr6:1312325..1312340,+#_49104bbd500bade648448997de3243df | p1@FOXQ1 |
3.88e-27 | FFCP PHASE2:Hg19::chr6:1312325..1312340,+#_49104bbd500bade648448997de3243df | p1@FOXQ1 |
5.02e-27 | FFCP PHASE2:Hg19::chr1:26503974..26504025,+#_4775d9105a71bed69532e3c1ec374148 | p1@CNKSR1 |
5.02e-27 | FFCP PHASE1:Hg19::chr1:26503974..26504025,+#_4775d9105a71bed69532e3c1ec374148 | p1@CNKSR1 |
5.37e-27 | FFCP PHASE1:Mm9::chr1:37722539..37722560,-#_805b273f9f04d9417cbf9147709d7114 | p@chr1:37722539..37722560, - |
5.37e-27 | FFCP PHASE2:Mm9::chr1:37722539..37722560,-#_805b273f9f04d9417cbf9147709d7114 | p@chr1:37722539..37722560, - |
5.43e-27 | FFCP PHASE2:Hg19::chr11:394196..394258,+#_657e5507bb7bbd5a13944a339310b9ae | p1@PKP3 |
5.43e-27 | FFCP PHASE1:Hg19::chr11:394196..394258,+#_657e5507bb7bbd5a13944a339310b9ae | p1@PKP3 |
6.53e-27 | FFCP PHASE2:Mm9::chr13:4278636..4278655,-#_d5cce1b590379085eb3c47987e041a6b | p1@Akr1c12 |
6.53e-27 | FFCP PHASE1:Mm9::chr13:4278636..4278655,-#_d5cce1b590379085eb3c47987e041a6b | p1@Akr1c12 |
1.11e-26 | FFCP PHASE2:Mm9::chr1:58852306..58852403,+#_f4ff1cfcda0158861df815d5ecb18b95 | p2@Casp8 |
1.11e-26 | FFCP PHASE1:Mm9::chr1:58852306..58852403,+#_f4ff1cfcda0158861df815d5ecb18b95 | p2@Casp8 |
2.45e-26 | FFCP PHASE2:Mm9::chr6:7795251..7795299,+#_905b2cbe7a6022d99ff7e670c66cd69a | p1@C1galt1 |
2.45e-26 | FFCP PHASE1:Mm9::chr6:7795251..7795299,+#_905b2cbe7a6022d99ff7e670c66cd69a | p1@C1galt1 |
2.56e-26 | FFCP PHASE1:Hg19::chr14:65409484..65409495,-#_bc4a316b0ecd9ae1fc2b3bdd865d4d13 | p2@GPX2 |
2.56e-26 | FFCP PHASE2:Hg19::chr14:65409484..65409495,-#_bc4a316b0ecd9ae1fc2b3bdd865d4d13 | p2@GPX2 |
2.62e-26 | FFCP PHASE1:Hg19::chr6:116381918..116381977,-#_768951ed03feee25c8b49fa3ea6f3e09 | p1@FRK |
2.62e-26 | FFCP PHASE2:Hg19::chr6:116381918..116381977,-#_768951ed03feee25c8b49fa3ea6f3e09 | p1@FRK |
2.79e-26 | FFCP PHASE2:Hg19::chr11:32851450..32851485,+#_f41f22f3605a7b0650f6006b8f44148a | p1@PRRG4 |
2.79e-26 | FFCP PHASE1:Hg19::chr11:32851450..32851485,+#_f41f22f3605a7b0650f6006b8f44148a | p1@PRRG4 |
3.02e-26 | FFCP PHASE2:Hg19::chr8:82644741..82644791,+#_fbec5f4d75dac713bd9e88ee61281e2d | p2@CHMP4C |
3.02e-26 | FFCP PHASE1:Hg19::chr8:82644741..82644791,+#_fbec5f4d75dac713bd9e88ee61281e2d | p2@CHMP4C |
3.55e-26 | FFCP PHASE2:Hg19::chr1:209825762..209825779,-#_cbbd36cc21655e66bcd6465c289136c8 | p1@LAMB3 |
3.55e-26 | FFCP PHASE1:Hg19::chr1:209825762..209825779,-#_cbbd36cc21655e66bcd6465c289136c8 | p1@LAMB3 |
4.15e-26 | FFCP PHASE2:Mm9::chr18:38369387..38369401,-#_72b5787f4631e19ded0cb4023a3b15ce | p4@Pcdh1 |
4.15e-26 | FFCP PHASE1:Mm9::chr18:38369387..38369401,-#_72b5787f4631e19ded0cb4023a3b15ce | p4@Pcdh1 |
4.54e-26 | FFCP PHASE2:Hg19::chr13:76334824..76334862,+#_adc24d8177350c92a76728c2e274286e | p2@LMO7 |
4.54e-26 | FFCP PHASE1:Hg19::chr13:76334824..76334862,+#_adc24d8177350c92a76728c2e274286e | p2@LMO7 |
4.87e-26 | FFCP PHASE2:Mm9::chr11:106781922..106781957,-#_c77e94aa4f3436e40f09da0699789786 | p4@Smurf2 |
4.87e-26 | FFCP PHASE1:Mm9::chr11:106781922..106781957,-#_c77e94aa4f3436e40f09da0699789786 | p4@Smurf2 |
4.9e-26 | FFCP PHASE2:Mm9::chr1:58852462..58852483,+#_a29bdff3088278642e73f7b84a374af5 | p4@Casp8 |
4.9e-26 | FFCP PHASE1:Mm9::chr1:58852462..58852483,+#_a29bdff3088278642e73f7b84a374af5 | p4@Casp8 |
5.37e-26 | FFCP PHASE1:Hg19::chr3:142315294..142315315,+#_fa03c80b72cb0594a70d606c77653a24 | p3@PLS1 |
5.37e-26 | FFCP PHASE2:Hg19::chr3:142315294..142315315,+#_fa03c80b72cb0594a70d606c77653a24 | p3@PLS1 |
5.52e-26 | FFCP PHASE1:Mm9::chr4:124428852..124428893,+#_a3087dd69f4ae9063a2834e62bfb9d1a | p1@Inpp5b |
5.52e-26 | FFCP PHASE2:Mm9::chr4:124428852..124428893,+#_a3087dd69f4ae9063a2834e62bfb9d1a | p1@Inpp5b |
5.79e-26 | FFCP PHASE2:Mm9::chr13:101322621..101322632,-#_56d0850b586aa75719f81482035de77d | p4@Ocln |
5.79e-26 | FFCP PHASE1:Mm9::chr13:101322621..101322632,-#_56d0850b586aa75719f81482035de77d | p4@Ocln |
6.23e-26 | FFCP PHASE1:Hg19::chr19:3708338..3708374,+#_59e5f90a1c767915874150dcac7cebd0 | p2@TJP3 |
6.23e-26 | FFCP PHASE2:Hg19::chr19:3708338..3708374,+#_59e5f90a1c767915874150dcac7cebd0 | p2@TJP3 |
6.37e-26 | FFCP PHASE2:Mm9::chr10:128180925..128180966,-#_4a4422d1cad5fb8ed23f1750727f0593 | p2@Dgka |
6.37e-26 | FFCP PHASE1:Mm9::chr10:128180925..128180966,-#_4a4422d1cad5fb8ed23f1750727f0593 | p2@Dgka |
7.63e-26 | FFCP PHASE2:Hg19::chr17:19651668..19651682,-#_d7bcd2e1f49bfcc2d57a9c1baa7a6b23 | p2@ALDH3A1 |
7.63e-26 | FFCP PHASE1:Hg19::chr17:19651668..19651682,-#_d7bcd2e1f49bfcc2d57a9c1baa7a6b23 | p2@ALDH3A1 |
8.05e-26 | FFCP PHASE1:Mm9::chr9:110782790..110782819,+#_174bf36ce63b9f12bdab1b43aa429086 | p1@Als2cl |
8.05e-26 | FFCP PHASE2:Mm9::chr9:110782790..110782819,+#_174bf36ce63b9f12bdab1b43aa429086 | p1@Als2cl |
8.42e-26 | FFCP PHASE2:Mm9::chr11:116072277..116072320,+#_551637baa2d88691a6a15c58841825f1 | p2@2310004N24Rik |
8.42e-26 | FFCP PHASE1:Mm9::chr11:116072277..116072320,+#_551637baa2d88691a6a15c58841825f1 | p2@2310004N24Rik |
9.38e-26 | FFCP PHASE2:Hg19::chr7:1595831..1595858,-#_b8b978d53c21f7842ef2919cbf473b7e | p1@TMEM184A |
9.38e-26 | FFCP PHASE1:Hg19::chr7:1595831..1595858,-#_b8b978d53c21f7842ef2919cbf473b7e | p1@TMEM184A |
1.03e-25 | FFCP PHASE1:Hg19::chr10:101690650..101690683,-#_d27a68484c477f2b31be9c4bf478c365 | p2@DNMBP |
1.03e-25 | FFCP PHASE2:Hg19::chr10:101690650..101690683,-#_d27a68484c477f2b31be9c4bf478c365 | p2@DNMBP |
1.14e-25 | FFCP PHASE2:Hg19::chr1:201979703..201979721,+#_ba1e0ddd1739bdede33c2ea8d428aea2 | p2@ELF3 |
1.14e-25 | FFCP PHASE1:Hg19::chr1:201979703..201979721,+#_ba1e0ddd1739bdede33c2ea8d428aea2 | p2@ELF3 |
1.37e-25 | FFCP PHASE1:Hg19::chr10:114133905..114133922,+#_88534b5a8815c20e031cf35f183e5985 | p2@ACSL5 |
1.37e-25 | FFCP PHASE2:Hg19::chr10:114133905..114133922,+#_88534b5a8815c20e031cf35f183e5985 | p2@ACSL5 |
1.44e-25 | FFCP PHASE2:Hg19::chr18:61144160..61144214,+#_10ded415a16f78dd72ec3647f213a53e | p1@SERPINB5 |
1.44e-25 | FFCP PHASE1:Hg19::chr18:61144160..61144214,+#_10ded415a16f78dd72ec3647f213a53e | p1@SERPINB5 |
1.48e-25 | FFCP PHASE2:Mm9::chr6:117867010..117867024,+#_6cea206a5961cfbb998905d0613768ab | p3@Hnrnpf |
1.48e-25 | FFCP PHASE1:Mm9::chr6:117867010..117867024,+#_6cea206a5961cfbb998905d0613768ab | p3@Hnrnpf |
1.51e-25 | FFCP PHASE1:Hg19::chr3:111451321..111451372,+#_4e2f3598f69b7834da440f5962f10433 | p3@PHLDB2 |
1.51e-25 | FFCP PHASE2:Hg19::chr3:111451321..111451372,+#_4e2f3598f69b7834da440f5962f10433 | p3@PHLDB2 |