UBERON:0006601: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=note: AAO:0000473 | |comment=note: AAO:0000473 | ||
|created_by= | |created_by= | ||
| | |def="Presumptive structure at the animal poll of the blastula that will develop into ectoderm via the epiblast. Determined by fate mapping." [ZFA:0001376] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006601 | |||
|is_a=UBERON:0006598 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=presumptive ectoderm | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000307 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="presumptive epidermis" RELATED [ZFA:0001376] | ||
|union_of= | |||
|xref=AAO:0000470;;EFO:0003466;;TAO:0001376;;XAO:0004132;;ZFA:0001376 | |||
}} | }} | ||
Latest revision as of 17:58, 12 September 2014
| Name: | presumptive ectoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Presumptive structure at the animal poll of the blastula that will develop into ectoderm via the epiblast. Determined by fate mapping." [ZFA:0001376] | ||
| Xrefs: |
| ||
| Synonyms: | "presumptive epidermis" RELATED [ZFA:0001376] | ||
| Comments: | note: AAO:0000473 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure) |
|---|---|
| part_of: | UBERON:0000307(blastula) |
Children
| develops from: | UBERON:0000924 (ectoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006601 (presumptive ectoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.23e-62 | FFCP PHASE2:Hg19::chr11:31839488..31839515,-#_65f293ef27e9730e1a22103d55888135 | p3@PAX6 |
| 3.23e-62 | FFCP PHASE1:Hg19::chr11:31839488..31839515,-#_65f293ef27e9730e1a22103d55888135 | p3@PAX6 |
| 6.65e-62 | FFCP PHASE1:Hg19::chr1:197237352..197237414,+#_22efe1eb377fb1f06a75d10be9d19275 | p2@CRB1 |
| 6.65e-62 | FFCP PHASE2:Hg19::chr1:197237352..197237414,+#_22efe1eb377fb1f06a75d10be9d19275 | p2@CRB1 |
| 1.04e-61 | FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_3a747fbfaa6ca9c647081be5476ae7f7 | p3@CTNND2 |
| 1.04e-61 | FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_3a747fbfaa6ca9c647081be5476ae7f7 | p3@CTNND2 |
| 1.02e-60 | FFCP PHASE1:Hg19::chr5:87980761..87980821,-#_f76966854bbe9fb8ada3e8c30cf79fee | p4@LINC00461 |
| 1.02e-60 | FFCP PHASE2:Hg19::chr5:87980761..87980821,-#_f76966854bbe9fb8ada3e8c30cf79fee | p4@LINC00461 |
| 6.2e-60 | FFCP PHASE2:Hg19::chr6:123100738..123100763,+#_863c95a3ba56dc1a57b34078c32f1cbf | p2@FABP7 |
| 6.2e-60 | FFCP PHASE1:Hg19::chr6:123100738..123100763,+#_863c95a3ba56dc1a57b34078c32f1cbf | p2@FABP7 |
| 1.12e-59 | FFCP PHASE2:Hg19::chr11:62475005..62475041,-#_4790e65a6cee48de23c27a3aa86d38ee | p6@BSCL2 |
| 1.12e-59 | FFCP PHASE1:Hg19::chr11:62475005..62475041,-#_4790e65a6cee48de23c27a3aa86d38ee | p6@BSCL2 |
| 1.34e-59 | FFCP PHASE1:Hg19::chr4:165305086..165305179,-#_465efbe6066539bf0b86a45a32b4550c | p2@MARCH1 |
| 1.34e-59 | FFCP PHASE2:Hg19::chr4:165305086..165305179,-#_465efbe6066539bf0b86a45a32b4550c | p2@MARCH1 |
| 1.88e-59 | FFCP PHASE2:Hg19::chr18:59000657..59000672,+#_609f8335b3ab8345b924fe140a1c964d | p1@CDH20 |
| 1.88e-59 | FFCP PHASE1:Hg19::chr18:59000657..59000672,+#_609f8335b3ab8345b924fe140a1c964d | p1@CDH20 |
| 8.39e-59 | FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_edfd14a0c3e73c69f8aeb4c2d7ffe3d2 | p6@GPM6B |
| 8.39e-59 | FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_edfd14a0c3e73c69f8aeb4c2d7ffe3d2 | p6@GPM6B |
| 9.87e-59 | FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_7bdae2263e40163deff23b70f36c4de2 | p1@ANKFN1 |
| 9.87e-59 | FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_7bdae2263e40163deff23b70f36c4de2 | p1@ANKFN1 |
| 2.74e-58 | FFCP PHASE1:Hg19::chr8:132053136..132053177,-#_30df3e532d454c54ba4985d2466c82d4 | p2@ADCY8 |
| 2.74e-58 | FFCP PHASE2:Hg19::chr8:132053136..132053177,-#_30df3e532d454c54ba4985d2466c82d4 | p2@ADCY8 |
| 3.3e-58 | FFCP PHASE1:Hg19::chr11:62474885..62474903,-#_268f4352c3a13e51350cdf95b7dd9caf | p5@BSCL2 |
| 3.3e-58 | FFCP PHASE2:Hg19::chr11:62474885..62474903,-#_268f4352c3a13e51350cdf95b7dd9caf | p5@BSCL2 |
| 3.49e-58 | FFCP PHASE1:Hg19::chr9:19789028..19789050,-#_36e4199feb188caccc784204708cac74 | p1@SLC24A2 |
| 3.49e-58 | FFCP PHASE2:Hg19::chr9:19789028..19789050,-#_36e4199feb188caccc784204708cac74 | p1@SLC24A2 |
| 1.03e-57 | FFCP PHASE2:Hg19::chr2:210526233..210526258,+#_6b86b206f1e1d55487c0b0ac8c3d6b0f | p9@MAP2 |
| 1.03e-57 | FFCP PHASE1:Hg19::chr2:210526233..210526258,+#_6b86b206f1e1d55487c0b0ac8c3d6b0f | p9@MAP2 |
| 2.3e-57 | FFCP PHASE1:Hg19::chr8:30496078..30496130,+#_c7c84f920938c9c06c4ec995221fcef7 | p1@LOC100507341 |
| 2.3e-57 | FFCP PHASE2:Hg19::chr8:30496078..30496130,+#_c7c84f920938c9c06c4ec995221fcef7 | p1@LOC100507341 |
| 2.58e-57 | FFCP PHASE1:Hg19::chr10:62149542..62149590,-#_0e8c5ebc633c715c511866ed3594707a | p1@ANK3 |
| 2.58e-57 | FFCP PHASE2:Hg19::chr10:62149542..62149590,-#_0e8c5ebc633c715c511866ed3594707a | p1@ANK3 |
| 2.86e-57 | FFCP PHASE2:Hg19::chr11:105481612..105481624,+#_fb9d23a56077e7aaf06ff326b593f1f4 | p2@GRIA4 |
| 2.86e-57 | FFCP PHASE1:Hg19::chr11:105481612..105481624,+#_fb9d23a56077e7aaf06ff326b593f1f4 | p2@GRIA4 |
| 3.09e-57 | FFCP PHASE1:Hg19::chr8:9953136..9953190,+#_7b4c30fd68c73a6ac3483766a1f6268c | p3@MSRA |
| 3.09e-57 | FFCP PHASE2:Hg19::chr8:9953136..9953190,+#_7b4c30fd68c73a6ac3483766a1f6268c | p3@MSRA |
| 7.06e-57 | FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_568fe3fcf890e8007f84f0dd42787a76 | p2@RFX4 |
| 7.06e-57 | FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_568fe3fcf890e8007f84f0dd42787a76 | p2@RFX4 |
| 9.33e-57 | FFCP PHASE2:Hg19::chr2:210526166..210526232,+#_d138256dd4507edbb6ac7892fc722daf | p5@MAP2 |
| 9.33e-57 | FFCP PHASE1:Hg19::chr2:210526166..210526232,+#_d138256dd4507edbb6ac7892fc722daf | p5@MAP2 |
| 9.72e-57 | FFCP PHASE2:Hg19::chr5:11904580..11904619,-#_69ee5b93fe3a4427658d569b23bff30f | p6@CTNND2 |
| 9.72e-57 | FFCP PHASE1:Hg19::chr5:11904580..11904619,-#_69ee5b93fe3a4427658d569b23bff30f | p6@CTNND2 |
| 1.1e-56 | FFCP PHASE2:Hg19::chr17:43972989..43973035,-#_b5e53b88b775d9b47406fed6a38f327b | p1@LOC100128977 |
| 1.1e-56 | FFCP PHASE1:Hg19::chr17:43972989..43973035,-#_b5e53b88b775d9b47406fed6a38f327b | p1@LOC100128977 |
| 1.39e-56 | FFCP PHASE2:Hg19::chr5:87437585..87437647,+#_19c1bc5bfbf74204eb6297dcdc523a80 | p@chr5:87437585..87437647, + |
| 1.39e-56 | FFCP PHASE1:Hg19::chr5:87437585..87437647,+#_19c1bc5bfbf74204eb6297dcdc523a80 | p@chr5:87437585..87437647, + |
| 1.39e-56 | FFCP PHASE2:Hg19::chr19:46932128..46932207,-#_19c1bc5bfbf74204eb6297dcdc523a80 | p@chr19:46932128..46932207, - |
| 1.39e-56 | FFCP PHASE1:Hg19::chr19:46932128..46932207,-#_19c1bc5bfbf74204eb6297dcdc523a80 | p@chr19:46932128..46932207, - |
| 1.4e-56 | FFCP PHASE2:Hg19::chr11:105481405..105481472,+#_27c38059a7e941cd3ba4a27f86a20ab4 | p1@GRIA4 |
| 1.4e-56 | FFCP PHASE1:Hg19::chr11:105481405..105481472,+#_27c38059a7e941cd3ba4a27f86a20ab4 | p1@GRIA4 |
| 1.65e-56 | FFCP PHASE2:Hg19::chr4:176733558..176733609,-#_017e0b0fb6cee2634df9b57e8c3ed443 | p7@GPM6A |
| 1.65e-56 | FFCP PHASE1:Hg19::chr4:176733558..176733609,-#_017e0b0fb6cee2634df9b57e8c3ed443 | p7@GPM6A |
| 2.03e-56 | FFCP PHASE2:Hg19::chr1:205012293..205012326,+#_f386cf98ac1f2323f5a447f22edddbd3 | p2@CNTN2 |
| 2.03e-56 | FFCP PHASE1:Hg19::chr1:205012293..205012326,+#_f386cf98ac1f2323f5a447f22edddbd3 | p2@CNTN2 |
| 5.74e-56 | FFCP PHASE2:Hg19::chr4:176733377..176733424,-#_8ec948de3598f7808d6afeecb30caee0 | p1@GPM6A |
| 5.74e-56 | FFCP PHASE1:Hg19::chr4:176733377..176733424,-#_8ec948de3598f7808d6afeecb30caee0 | p1@GPM6A |
| 7.08e-56 | FFCP PHASE2:Hg19::chr12:20848486..20848542,+#_ef57727f64215f42b414766b3e76f3ef | p1@SLCO1C1 |
| 7.08e-56 | FFCP PHASE1:Hg19::chr12:20848486..20848542,+#_ef57727f64215f42b414766b3e76f3ef | p1@SLCO1C1 |
| 7.16e-56 | FFCP PHASE2:Hg19::chr9:19789059..19789070,-#_73b319975f29a4e3065d4ffc0e444739 | p2@SLC24A2 |
| 7.16e-56 | FFCP PHASE1:Hg19::chr9:19789059..19789070,-#_73b319975f29a4e3065d4ffc0e444739 | p2@SLC24A2 |
| 7.49e-56 | FFCP PHASE1:Hg19::chr11:105480793..105480845,+#_ae0572ad2f9841c2f36227d0ef8a812b | p3@GRIA4 |
| 7.49e-56 | FFCP PHASE2:Hg19::chr11:105480793..105480845,+#_ae0572ad2f9841c2f36227d0ef8a812b | p3@GRIA4 |
| 1.31e-55 | FFCP PHASE1:Hg19::chr3:181417353..181417371,+#_226d72a1d21577078c18b70c26eab3c6 | p1@SOX2-OT |
| 1.31e-55 | FFCP PHASE2:Hg19::chr3:181417353..181417371,+#_226d72a1d21577078c18b70c26eab3c6 | p1@SOX2-OT |
| 1.32e-55 | FFCP PHASE2:Hg19::chr4:176733425..176733439,-#_400529a09f4ff53d6470f8e3663e8fa5 | p8@GPM6A |
| 1.32e-55 | FFCP PHASE1:Hg19::chr4:176733425..176733439,-#_400529a09f4ff53d6470f8e3663e8fa5 | p8@GPM6A |
| 1.35e-55 | FFCP PHASE1:Hg19::chr8:9953735..9953778,+#_558512f828b2e905caaf4dbe53544dc7 | p@chr8:9953735..9953778, + |
| 1.35e-55 | FFCP PHASE2:Hg19::chr8:9953735..9953778,+#_558512f828b2e905caaf4dbe53544dc7 | p@chr8:9953735..9953778, + |
| 1.39e-55 | FFCP PHASE1:Hg19::chr3:47933982..47934047,-#_c595b77329d143f3d9234edac1e6a24c | p3@MAP4 |
| 1.39e-55 | FFCP PHASE2:Hg19::chr3:47933982..47934047,-#_c595b77329d143f3d9234edac1e6a24c | p3@MAP4 |
| 1.59e-55 | FFCP PHASE2:Hg19::chr3:181417374..181417407,+#_8985f4c4b5204034237588498c9d6666 | p2@SOX2-OT |
| 1.59e-55 | FFCP PHASE1:Hg19::chr3:181417374..181417407,+#_8985f4c4b5204034237588498c9d6666 | p2@SOX2-OT |
| 1.87e-55 | FFCP PHASE2:Hg19::chr21:42219168..42219187,-#_3af36d9f16a236919b06b8d117d5bf32 | p2@DSCAM |
| 1.87e-55 | FFCP PHASE1:Hg19::chr21:42219168..42219187,-#_3af36d9f16a236919b06b8d117d5bf32 | p2@DSCAM |
| 2.95e-55 | FFCP PHASE2:Hg19::chr12:99288536..99288653,-#_6879c918a9870edfdbf157df44fb601f | p1@ANKS1B |
| 2.95e-55 | FFCP PHASE1:Hg19::chr12:99288536..99288653,-#_6879c918a9870edfdbf157df44fb601f | p1@ANKS1B |
| 4.14e-55 | FFCP PHASE1:Hg19::chr17:49124154..49124169,-#_210458c5027280c7206b10b91a5b3c9b | p6@SPAG9 |
| 4.14e-55 | FFCP PHASE2:Hg19::chr17:49124154..49124169,-#_210458c5027280c7206b10b91a5b3c9b | p6@SPAG9 |
| 7.57e-55 | FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_1daee6a15215c0b20a6b18251975a564 | p1@RFX4 |
| 7.57e-55 | FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_1daee6a15215c0b20a6b18251975a564 | p1@RFX4 |
| 7.83e-55 | FFCP PHASE1:Hg19::chr17:42984601..42984636,-#_50bb2a73a11d139ed01d1b92a0e4da54 | p2@GFAP |
| 7.83e-55 | FFCP PHASE2:Hg19::chr17:42984601..42984636,-#_50bb2a73a11d139ed01d1b92a0e4da54 | p2@GFAP |
| 8.99e-55 | FFCP PHASE1:Hg19::chr2:210444402..210444423,+#_caf8e7cccac505e4e7b23bbf5418e465 | p11@MAP2 |
| 8.99e-55 | FFCP PHASE2:Hg19::chr2:210444402..210444423,+#_caf8e7cccac505e4e7b23bbf5418e465 | p11@MAP2 |
| 9.16e-55 | FFCP PHASE1:Hg19::chrX:151619746..151619815,-#_f6dfa35508d6ee2944e51afe0fd25ba5 | p1@GABRA3 |
| 9.16e-55 | FFCP PHASE2:Hg19::chrX:151619746..151619815,-#_f6dfa35508d6ee2944e51afe0fd25ba5 | p1@GABRA3 |
| 1.03e-54 | FFCP PHASE1:Hg19::chr14:60097524..60097538,-#_df80776a445fc601d058dc2e964f7d5c | p3@RTN1 |
| 1.03e-54 | FFCP PHASE2:Hg19::chr14:60097524..60097538,-#_df80776a445fc601d058dc2e964f7d5c | p3@RTN1 |
| 1.14e-54 | FFCP PHASE1:Hg19::chr2:210444267..210444287,+#_c351bde55dd465b5e38d445577b10a05 | p7@MAP2 |
| 1.14e-54 | FFCP PHASE2:Hg19::chr2:210444267..210444287,+#_c351bde55dd465b5e38d445577b10a05 | p7@MAP2 |
| 1.16e-54 | FFCP PHASE2:Hg19::chr17:43972010..43972027,+#_b784c25cbda7e4e216abeb1907a53cce | p4@MAPT |
| 1.16e-54 | FFCP PHASE1:Hg19::chr17:43972010..43972027,+#_b784c25cbda7e4e216abeb1907a53cce | p4@MAPT |
| 1.28e-54 | FFCP PHASE2:Hg19::chr2:210444345..210444394,+#_59f153610087d30d97e07ce6c06c06dd | p3@MAP2 |
| 1.28e-54 | FFCP PHASE1:Hg19::chr19:10563567..10563617,+#_59f153610087d30d97e07ce6c06c06dd | p1@PDE4A |
| 1.28e-54 | FFCP PHASE2:Hg19::chr19:10563567..10563617,+#_59f153610087d30d97e07ce6c06c06dd | p1@PDE4A |
| 1.28e-54 | FFCP PHASE1:Hg19::chr2:210444345..210444394,+#_59f153610087d30d97e07ce6c06c06dd | p3@MAP2 |
| 2.04e-54 | FFCP PHASE2:Hg19::chrX:13835124..13835142,-#_15da54e190626b67bed8a70bb3945cd7 | p5@GPM6B |
| 2.04e-54 | FFCP PHASE1:Hg19::chrX:13835124..13835142,-#_15da54e190626b67bed8a70bb3945cd7 | p5@GPM6B |
| 2.23e-54 | FFCP PHASE2:Hg19::chr1:177134024..177134052,-#_b7b8e7aa14199778edcb351242e93c93 | p2@ASTN1 |
| 2.23e-54 | FFCP PHASE1:Hg19::chr1:177134024..177134052,-#_b7b8e7aa14199778edcb351242e93c93 | p2@ASTN1 |
