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{{UBERON
{{UBERON
|id=UBERON:0006235
|alt_id=
|name=foregut-midgut junction
|namespace=
|def=
|xref=EHDAA2:0000569;;EHDAA:526;;EMAPA:16363;;VHOG:0000291
|is_a=UBERON:0000015
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=emapa_ehdaa2
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0006235
|is_a=UBERON:0007651
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=foregut-midgut junction
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001555
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=emapa_ehdaa2
|preceded_by=
|synonym=
|union_of=
|xref=EHDAA2:0000569;;EHDAA:526;;EMAPA:16363;;VHOG:0000291
}}
}}

Latest revision as of 17:56, 12 September 2014

Name:foregut-midgut junction
Namespace:FANTOM
Xrefs:
links:

EHDAA2:0000569
EHDAA:526
EMAPA:16363

VHOG:0000291
Subset: emapa_ehdaa2

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0007651(anatomical junction)
part_of:UBERON:0001555(digestive tract)



Children

part of:UBERON:0004912 (biliary bud),UBERON:0008835 (hepatic diverticulum),UBERON:0008836 (liver bud),UBERON:0009497 (epithelium of foregut-midgut junction),UBERON:0009550 (endoderm of foregut-midgut junction)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006235 (foregut-midgut junction), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.2e-75FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_db031fb429d10ebb864b1e4bc99dd630p5@NR1H4
9.2e-75FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_db031fb429d10ebb864b1e4bc99dd630p5@NR1H4
1.22e-72FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_c0bfc72e9f5e9d63246c8d495dfca681p@chr5:90897694..90897705, +
1.22e-72FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_c0bfc72e9f5e9d63246c8d495dfca681p@chr5:90897694..90897705, +
2.2e-72FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_a81282c7726d178130f173a6b1303a8cp@chr19:25169885..25169900, +
2.2e-72FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_a81282c7726d178130f173a6b1303a8cp@chr19:25169885..25169900, +
5.51e-71FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_e28df3fca55bfbfce1b8f30a04b015edp6@Insc
5.51e-71FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_e28df3fca55bfbfce1b8f30a04b015edp6@Insc
1.64e-70FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_d284e793c4c0f0fd9df281a3ad9da1b0p1@ENST00000421143
1.64e-70FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_d284e793c4c0f0fd9df281a3ad9da1b0p1@ENST00000421143
1.7e-70FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_6ccf3c0cae6128bd9baf24ae42d6caf8p2@uc009nzu.1
1.7e-70FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_6ccf3c0cae6128bd9baf24ae42d6caf8p2@uc009nzu.1
1.28e-68FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_89ea14c883aa8e79a43e692504fa2409p5@Bhmt
1.28e-68FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_89ea14c883aa8e79a43e692504fa2409p5@Bhmt
2.72e-68FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_b0d97fc7314117779d48f54d181f46d9p@chr1:162917234..162917248, +
2.72e-68FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_b0d97fc7314117779d48f54d181f46d9p@chr1:162917234..162917248, +
3.5e-68FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_1cc8f938c9c3d0a8b603d1c19c724130p1@Rtp3
3.5e-68FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_1cc8f938c9c3d0a8b603d1c19c724130p1@Rtp3
2.47e-67FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_40f7821d407e6d1dcecbf16862de8c0ap2@Rtp3
2.47e-67FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_40f7821d407e6d1dcecbf16862de8c0ap2@Rtp3
2.47e-67FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_40f7821d407e6d1dcecbf16862de8c0ap@chr7:112744083..112744109, -
2.47e-67FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_40f7821d407e6d1dcecbf16862de8c0ap@chr7:112744083..112744109, -
6.55e-67FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_292784117897f0a5da34d36337cdce97p@chr13:23928766..23928779, +
6.55e-67FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_292784117897f0a5da34d36337cdce97p@chr13:23928766..23928779, +
7.85e-67FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_b0ed17e9bbbc4dfed81b01062a047b6bp3@Blvrb
7.85e-67FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_b0ed17e9bbbc4dfed81b01062a047b6bp3@Blvrb
1.58e-66FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_a66b33c8cc45401c011686fa2bf6eef7p@chr12:105004018..105004046, -
1.58e-66FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_a66b33c8cc45401c011686fa2bf6eef7p@chr2:10041210..10041222, -
1.58e-66FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_a66b33c8cc45401c011686fa2bf6eef7p@chr16:22898981..22898988, -
1.58e-66FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_a66b33c8cc45401c011686fa2bf6eef7p@chr16:22898981..22898988, -
1.58e-66FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_a66b33c8cc45401c011686fa2bf6eef7p@chr6:128436166..128436185, -
1.58e-66FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_a66b33c8cc45401c011686fa2bf6eef7p@chr2:10041210..10041222, -
1.58e-66FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_a66b33c8cc45401c011686fa2bf6eef7p@chr16:22894900..22894910, +
1.58e-66FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_a66b33c8cc45401c011686fa2bf6eef7p@chr12:105004018..105004046, -
1.58e-66FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_a66b33c8cc45401c011686fa2bf6eef7p@chr6:128436166..128436185, -
1.58e-66FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_a66b33c8cc45401c011686fa2bf6eef7p@chr16:22894900..22894910, +
1.17e-64FFCP PHASE1:Mm9::chr1:173155793..173155841,+#_cd45a410e82f16efebe1d0cddf0ca5ccp@chr1:173155793..173155841, +
1.17e-64FFCP PHASE2:Mm9::chr1:173155793..173155841,+#_cd45a410e82f16efebe1d0cddf0ca5ccp@chr1:173155793..173155841, +
1.34e-64FFCP PHASE1:Mm9::chr17:12588483..12588503,+#_5c76d4054fe791a5351c1fb84a6fa7a4p@chr17:12588483..12588503, +
1.34e-64FFCP PHASE2:Mm9::chr17:12588483..12588503,+#_5c76d4054fe791a5351c1fb84a6fa7a4p@chr17:12588483..12588503, +
1.38e-64FFCP PHASE1:Mm9::chr17:12584645..12584657,+#_ed3086ee87dad7bb133270c15f927570p@chr17:12584645..12584657, +
1.38e-64FFCP PHASE2:Mm9::chr17:12584645..12584657,+#_ed3086ee87dad7bb133270c15f927570p@chr17:12584645..12584657, +
1.62e-64FFCP PHASE1:Mm9::chr1:166179426..166179437,+#_4f6926c304778598a9b78562d20e80f8p@chr1:166179426..166179437, +
1.62e-64FFCP PHASE2:Mm9::chr1:166179426..166179437,+#_4f6926c304778598a9b78562d20e80f8p@chr1:166179426..166179437, +
1.68e-64FFCP PHASE1:Mm9::chr8:34917332..34917357,-#_a8ec4f41ddcc9f5f0333ee96ce0c5c4ap@chr8:34917332..34917357, -
1.68e-64FFCP PHASE2:Mm9::chr8:34917332..34917357,-#_a8ec4f41ddcc9f5f0333ee96ce0c5c4ap@chr8:34917332..34917357, -
4.38e-64FFCP PHASE1:Mm9::chr19:38191263..38191291,-#_deb0af3b54574a72e18b0355ed678f88p@chr19:38191263..38191291, -
4.38e-64FFCP PHASE2:Mm9::chr19:38191263..38191291,-#_deb0af3b54574a72e18b0355ed678f88p@chr19:38191263..38191291, -
9.3e-64FFCP PHASE1:Mm9::chr7:121912266..121912277,+#_4d17ad67f105d073f6432c5ce698fe8ep8@Insc
9.3e-64FFCP PHASE2:Mm9::chr7:121912266..121912277,+#_4d17ad67f105d073f6432c5ce698fe8ep8@Insc
1.1e-63FFCP PHASE2:Mm9::chr5:90893974..90893978,+#_cb18ccd7611af8a24b1fc5d0dc72b803p@chr5:90893974..90893978, +
1.1e-63FFCP PHASE1:Mm9::chr5:90893974..90893978,+#_cb18ccd7611af8a24b1fc5d0dc72b803p@chr5:90893974..90893978, +
1.7e-63FFCP PHASE1:Mm9::chr8:131012475..131012492,-#_1136feaa07f69f398e8d67c0e3abe3d2p1@uc009nzu.1
1.7e-63FFCP PHASE2:Mm9::chr8:131012475..131012492,-#_1136feaa07f69f398e8d67c0e3abe3d2p1@uc009nzu.1
1.85e-63FFCP PHASE1:Mm9::chr8:46380208..46380217,-#_13443a2ce14e42ef4e655054fd4ce931p3@Klkb1
1.85e-63FFCP PHASE2:Mm9::chr8:46380208..46380217,-#_13443a2ce14e42ef4e655054fd4ce931p3@Klkb1
2.02e-63FFCP PHASE2:Mm9::chr3:57191661..57191672,-#_f3cdefcfea9916841f1b410b943a2430p@chr3:57191661..57191672, -
2.02e-63FFCP PHASE1:Mm9::chr3:57191661..57191672,-#_f3cdefcfea9916841f1b410b943a2430p@chr3:57191661..57191672, -
2.18e-63FFCP PHASE2:Mm9::chr17:12583153..12583171,+#_d04916337b1c1c706e1c8c03877c644cp@chr17:12583153..12583171, +
2.18e-63FFCP PHASE1:Mm9::chr17:12583153..12583171,+#_d04916337b1c1c706e1c8c03877c644cp@chr17:12583153..12583171, +
2.2e-63FFCP PHASE2:Mm9::chr3:82814412..82814431,+#_ec970890ee0a5761d50d31dc71801471p@chr3:82814412..82814431, +
2.2e-63FFCP PHASE1:Mm9::chr3:82814412..82814431,+#_ec970890ee0a5761d50d31dc71801471p@chr3:82814412..82814431, +
3.67e-63FFCP PHASE1:Mm9::chr5:93000570..93000589,+#_a10f5a05feda359e122df09f7c1746adp3@Fam47e
3.67e-63FFCP PHASE2:Mm9::chr5:93000570..93000589,+#_a10f5a05feda359e122df09f7c1746adp3@Fam47e
5.17e-63FFCP PHASE2:Mm9::chr16:22895330..22895339,-#_ab8be8c13ec0ecc4703cd9928f835f06p@chr16:22895330..22895339, -
5.17e-63FFCP PHASE1:Mm9::chr16:22895330..22895339,-#_ab8be8c13ec0ecc4703cd9928f835f06p@chr16:22895330..22895339, -
5.17e-63FFCP PHASE2:Mm9::chr8:92849825..92849837,-#_ab8be8c13ec0ecc4703cd9928f835f06p@chr8:92849825..92849837, -
5.17e-63FFCP PHASE1:Mm9::chr15:77605636..77605639,+#_ab8be8c13ec0ecc4703cd9928f835f06p@chr15:77605636..77605639, +
5.17e-63FFCP PHASE1:Mm9::chr3:82835513..82835525,+#_ab8be8c13ec0ecc4703cd9928f835f06p@chr3:82835513..82835525, +
5.17e-63FFCP PHASE2:Mm9::chr3:82835513..82835525,+#_ab8be8c13ec0ecc4703cd9928f835f06p@chr3:82835513..82835525, +
5.17e-63FFCP PHASE1:Mm9::chr16:23449901..23449906,-#_ab8be8c13ec0ecc4703cd9928f835f06p@chr16:23449901..23449906, -
5.17e-63FFCP PHASE1:Mm9::chr8:92849825..92849837,-#_ab8be8c13ec0ecc4703cd9928f835f06p@chr8:92849825..92849837, -
5.17e-63FFCP PHASE2:Mm9::chr15:77605636..77605639,+#_ab8be8c13ec0ecc4703cd9928f835f06p@chr15:77605636..77605639, +
5.17e-63FFCP PHASE2:Mm9::chr16:23449901..23449906,-#_ab8be8c13ec0ecc4703cd9928f835f06p@chr16:23449901..23449906, -
6.19e-63FFCP PHASE1:Mm9::chr16:22896674..22896687,-#_5bc8ec0f4492dfa5fdfb3c0e7e2f4843p@chr16:22896674..22896687, -
6.19e-63FFCP PHASE2:Mm9::chr16:22896674..22896687,-#_5bc8ec0f4492dfa5fdfb3c0e7e2f4843p@chr16:22896674..22896687, -
6.77e-63FFCP PHASE1:Mm9::chr17:12577256..12577270,+#_ca49bffdef42c3ac1a5e0e0ae2af0e34p@chr17:12577256..12577270, +
6.77e-63FFCP PHASE2:Mm9::chr17:12577256..12577270,+#_ca49bffdef42c3ac1a5e0e0ae2af0e34p@chr17:12577256..12577270, +
6.95e-63FFCP PHASE1:Mm9::chr17:32822530..32822541,+#_643b68c543d786897ee5edc2cbad764cp2@Cyp4f15
6.95e-63FFCP PHASE2:Mm9::chr17:32822530..32822541,+#_643b68c543d786897ee5edc2cbad764cp2@Cyp4f15
7.62e-63FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_0ddd328bb845167a77ccf60559d525fap7@TOP1MT
7.62e-63FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_0ddd328bb845167a77ccf60559d525fap58@APOB
7.62e-63FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_0ddd328bb845167a77ccf60559d525fap58@APOB
7.62e-63FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_0ddd328bb845167a77ccf60559d525fap7@TOP1MT
9.86e-63FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_7389bd5568efc63ef156befd40a4607dp@chr11:60622345..60622377, -
9.86e-63FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_7389bd5568efc63ef156befd40a4607dp@chr11:60622345..60622377, -
1.39e-62FFCP PHASE1:Mm9::chr16:22899236..22899246,+#_39518a546bad57de7ed4a1e195bcf174p@chr16:22899236..22899246, +
1.39e-62FFCP PHASE1:Mm9::chr16:22899322..22899331,+#_39518a546bad57de7ed4a1e195bcf174p@chr16:22899322..22899331, +
1.39e-62FFCP PHASE1:Mm9::chr16:22895286..22895297,-#_39518a546bad57de7ed4a1e195bcf174p@chr16:22895286..22895297, -
1.39e-62FFCP PHASE2:Mm9::chr16:22895286..22895297,-#_39518a546bad57de7ed4a1e195bcf174p@chr16:22895286..22895297, -
1.39e-62FFCP PHASE1:Mm9::chr6:128438012..128438027,-#_39518a546bad57de7ed4a1e195bcf174p@chr6:128438012..128438027, -
1.39e-62FFCP PHASE1:Mm9::chr12:105002005..105002050,-#_39518a546bad57de7ed4a1e195bcf174p@chr12:105002005..105002050, -
1.39e-62FFCP PHASE2:Mm9::chr6:11948347..11948351,-#_39518a546bad57de7ed4a1e195bcf174p@chr6:11948347..11948351, -
1.39e-62FFCP PHASE1:Mm9::chr6:128436196..128436215,-#_39518a546bad57de7ed4a1e195bcf174p@chr6:128436196..128436215, -
1.39e-62FFCP PHASE2:Mm9::chr6:128438012..128438027,-#_39518a546bad57de7ed4a1e195bcf174p@chr6:128438012..128438027, -
1.39e-62FFCP PHASE2:Mm9::chr12:105066241..105066272,-#_39518a546bad57de7ed4a1e195bcf174p1@Serpina1b
1.39e-62FFCP PHASE2:Mm9::chr3:82847318..82847329,-#_39518a546bad57de7ed4a1e195bcf174p@chr3:82847318..82847329, -
1.39e-62FFCP PHASE1:Mm9::chr12:105066241..105066272,-#_39518a546bad57de7ed4a1e195bcf174p1@Serpina1b
1.39e-62FFCP PHASE1:Mm9::chr3:82847318..82847329,-#_39518a546bad57de7ed4a1e195bcf174p@chr3:82847318..82847329, -
1.39e-62FFCP PHASE2:Mm9::chr12:105002005..105002050,-#_39518a546bad57de7ed4a1e195bcf174p@chr12:105002005..105002050, -

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