UBERON:0006215: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [ZFIN:curator] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006215 | |||
|is_a=UBERON:0001048 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
| | |name=rhombic lip | ||
| | |namespace=FANTOM | ||
| | |obo_creation_date= | ||
|part_of=UBERON:0002028;;UBERON:0010092 | |||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The interface between the dorsal neuroepithelium and the roofplate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain.[TAO]" xsd:string | |||
|subset=vertebrate_core | |||
|synonym="cerebellum primordium" RELATED [EMAPA:17074];;"dorsal part of alar plate of metencephalon" RELATED [EMAPA:17074] | |||
|union_of= | |||
|xref=EHDAA2:0000229;;EMAPA:17074;;TAO:0001440;;XAO:0004135;;ZFA:0001440 | |||
}} | }} | ||
Latest revision as of 17:56, 12 September 2014
| Name: | rhombic lip | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [ZFIN:curator] | ||
| Xrefs: |
| ||
| Synonyms: |
"cerebellum primordium" RELATED [EMAPA:17074] "dorsal part of alar plate of metencephalon" RELATED [EMAPA:17074] | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001048(primordium) |
|---|---|
| part_of: | UBERON:0002028(hindbrain),UBERON:0010092(future metencephalon) |
Children
| develops from: | UBERON:0002037 (cerebellum) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006215 (rhombic lip), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:2241890..2241895,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr1:2241890..2241895, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr18:59415396..59415427,+#_313c5c6a1300570bfbc9c72afbf5a297 | p1@uc002lig.1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr3:147141170..147141181,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr3:147141170..147141181, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:9862312..9862332,-#_313c5c6a1300570bfbc9c72afbf5a297 | p32@GAS7 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:78430875..78430887,+#_313c5c6a1300570bfbc9c72afbf5a297 | p1@AB384547 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:161112675..161112678,+#_313c5c6a1300570bfbc9c72afbf5a297 | p10@GABRA6 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:122733093..122733100,+#_313c5c6a1300570bfbc9c72afbf5a297 | p8@CRTAM |
| 1.83e-98 | FFCP PHASE1:Hg19::chr7:14025135..14025147,-#_313c5c6a1300570bfbc9c72afbf5a297 | p42@ETV1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:89680444..89680453,-#_313c5c6a1300570bfbc9c72afbf5a297 | p31@FAM13A |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:64146203..64146207,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr11:64146203..64146207, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:2257102..2257110,-#_313c5c6a1300570bfbc9c72afbf5a297 | p6@MXD4 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:64120370..64120371,+#_313c5c6a1300570bfbc9c72afbf5a297 | p16@CCDC88B |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:31822160..31822172,-#_313c5c6a1300570bfbc9c72afbf5a297 | p30@PAX6 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr3:147114396..147114403,-#_313c5c6a1300570bfbc9c72afbf5a297 | p23@ZIC4 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:9862312..9862332,-#_313c5c6a1300570bfbc9c72afbf5a297 | p32@GAS7 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr13:42792979..42793012,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr13:42792979..42793012, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:72922664..72922672,+#_313c5c6a1300570bfbc9c72afbf5a297 | p31@RIMS1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:39553443..39553452,-#_313c5c6a1300570bfbc9c72afbf5a297 | p2@KRT31 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr7:128520567..128520578,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr7:128520567..128520578, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr22:17891551..17891560,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr22:17891551..17891560, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr18:50985377..50985386,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr18:50985377..50985386, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr8:17579304..17579321,-#_313c5c6a1300570bfbc9c72afbf5a297 | p40@MTUS1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:77582934..77582947,+#_313c5c6a1300570bfbc9c72afbf5a297 | p9@TMEM63C |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:718943..718952,+#_313c5c6a1300570bfbc9c72afbf5a297 | p10@PCGF3 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:49357829..49357832,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:49357829..49357832, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:49313357..49313362,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:49313357..49313362, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:52171354..52171361,+#_313c5c6a1300570bfbc9c72afbf5a297 | p43@FRMD6 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:45062215..45062225,+#_313c5c6a1300570bfbc9c72afbf5a297 | p4@AK054905 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr7:49815147..49815153,+#_313c5c6a1300570bfbc9c72afbf5a297 | p5@VWC2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:242613002..242613023,-#_313c5c6a1300570bfbc9c72afbf5a297 | p11@PLD5 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:87377029..87377039,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:87377029..87377039, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:34046479..34046486,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr6:34046479..34046486, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:24898354..24898366,-#_313c5c6a1300570bfbc9c72afbf5a297 | p8@CBLN3 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:3287626..3287633,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr4:3287626..3287633, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:77582845..77582854,+#_313c5c6a1300570bfbc9c72afbf5a297 | p10@TMEM63C |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71928371..71928382,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr4:71928371..71928382, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:608967..608994,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:608967..608994, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:161112862..161112869,+#_313c5c6a1300570bfbc9c72afbf5a297 | p11@GABRA6 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr19:6501233..6501243,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr19:6501233..6501243, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chrX:71131166..71131173,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chrX:71131166..71131173, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:152884494..152884503,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr6:152884494..152884503, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr19:6501203..6501206,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr19:6501203..6501206, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:133821982..133821993,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr11:133821982..133821993, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr7:99995188..99995194,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr7:99995188..99995194, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:72667207..72667214,+#_313c5c6a1300570bfbc9c72afbf5a297 | p12@RAB37 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:31334809..31334819,-#_313c5c6a1300570bfbc9c72afbf5a297 | p1@DHFRP2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr8:140666585..140666599,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr8:140666585..140666599, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:87377029..87377039,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:87377029..87377039, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:244355180..244355201,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr1:244355180..244355201, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:45062007..45062020,+#_313c5c6a1300570bfbc9c72afbf5a297 | p7@AK054905 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:108438755..108438763,-#_313c5c6a1300570bfbc9c72afbf5a297 | p20@EXPH5 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr13:100633194..100633202,+#_313c5c6a1300570bfbc9c72afbf5a297 | p6@AK298232 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr3:9165885..9165918,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr3:9165885..9165918, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:65999337..65999347,+#_313c5c6a1300570bfbc9c72afbf5a297 | p26@PACS1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr3:22108225..22108233,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr3:22108225..22108233, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr2:39116996..39117003,+#_313c5c6a1300570bfbc9c72afbf5a297 | p7@ARHGEF33 |
| 1.83e-98 | FFCP PHASE1:Hg19::chrX:105192423..105192431,+#_313c5c6a1300570bfbc9c72afbf5a297 | p8@NRK |
| 1.83e-98 | FFCP PHASE2:Hg19::chr19:17992758..17992791,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr19:17992758..17992791, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr7:44308399..44308433,-#_313c5c6a1300570bfbc9c72afbf5a297 | p17@CAMK2B |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:72922559..72922568,+#_313c5c6a1300570bfbc9c72afbf5a297 | p28@RIMS1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:117873869..117873879,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr4:117873869..117873879, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr7:1277107..1277145,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr7:1277107..1277145, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr2:39894333..39894353,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr2:39894333..39894353, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:59775744..59775751,+#_313c5c6a1300570bfbc9c72afbf5a297 | p24@FGGY |
| 1.83e-98 | FFCP PHASE2:Hg19::chr19:3056479..3056494,-#_313c5c6a1300570bfbc9c72afbf5a297 | p27@AES |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:146350267..146350276,+#_313c5c6a1300570bfbc9c72afbf5a297 | p10@GRM1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr13:100623731..100623747,-#_313c5c6a1300570bfbc9c72afbf5a297 | p8@ZIC5 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:104480062..104480069,-#_313c5c6a1300570bfbc9c72afbf5a297 | p3@ENST00000538641 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr18:8781915..8781932,+#_313c5c6a1300570bfbc9c72afbf5a297 | p15@CCDC165 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr21:47268058..47268079,+#_313c5c6a1300570bfbc9c72afbf5a297 | p5@PCBP3 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr15:81489302..81489313,+#_313c5c6a1300570bfbc9c72afbf5a297 | p20@IL16 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:77582822..77582838,+#_313c5c6a1300570bfbc9c72afbf5a297 | p6@TMEM63C |
| 1.83e-98 | FFCP PHASE1:Hg19::chr3:147139238..147139247,+#_313c5c6a1300570bfbc9c72afbf5a297 | p26@ZIC1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:1953233..1953242,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr1:1953233..1953242, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:4731350..4731363,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:4731350..4731363, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr21:32624498..32624505,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr21:32624498..32624505, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:123396575..123396583,+#_313c5c6a1300570bfbc9c72afbf5a297 | p9@GRAMD1B |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:34004237..34004248,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr6:34004237..34004248, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:113682304..113682315,+#_313c5c6a1300570bfbc9c72afbf5a297 | p17@TPCN1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:72667619..72667628,+#_313c5c6a1300570bfbc9c72afbf5a297 | p9@RAB37 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:161112693..161112696,+#_313c5c6a1300570bfbc9c72afbf5a297 | p12@GABRA6 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:114254131..114254143,+#_313c5c6a1300570bfbc9c72afbf5a297 | p35@ANK2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:23419354..23419361,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:23419354..23419361, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:64146900..64146905,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr11:64146900..64146905, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:45062290..45062300,+#_313c5c6a1300570bfbc9c72afbf5a297 | p3@AK054905 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:87777127..87777141,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr5:87777127..87777141, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr22:32022290..32022297,-#_313c5c6a1300570bfbc9c72afbf5a297 | p30@PISD |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:244355163..244355179,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr1:244355163..244355179, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:30616884..30616898,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr20:30616884..30616898, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chrX:71131124..71131135,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chrX:71131124..71131135, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr9:109460295..109460307,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr9:109460295..109460307, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:159766567..159766580,-#_313c5c6a1300570bfbc9c72afbf5a297 | p8@CCNJL |
| 1.83e-98 | FFCP PHASE1:Hg19::chr22:51137783..51137794,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr22:51137783..51137794, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:46639505..46639517,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr1:46639505..46639517, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:612039..612048,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:612039..612048, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:31822160..31822172,-#_313c5c6a1300570bfbc9c72afbf5a297 | p30@PAX6 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:93224771..93224774,+#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr4:93224771..93224774, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:228602576..228602587,-#_313c5c6a1300570bfbc9c72afbf5a297 | p1@CU689740 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:72667207..72667214,+#_313c5c6a1300570bfbc9c72afbf5a297 | p12@RAB37 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:3656599..3656608,-#_313c5c6a1300570bfbc9c72afbf5a297 | p@chr16:3656599..3656608, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "The interface between the dorsal neuroepithelium and the roofplate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
