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{{UBERON
{{UBERON
|id=UBERON:0005208
|alt_id=
|name=right atrium valve
|namespace=
|def="A valve that is part of a right atrium [Obol]." [OBOL:automatic]
|xref=EHDAA2:0000302;;EMAPA:17327;;MA:0001871
|is_a=UBERON:0003978;;UBERON:0004120
|synonym="right atrium valves" RELATED PLURAL [EHDAA2:0000302];;"valve of right atrium" EXACT [EMAPA:17327]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A valve that is part of a right atrium [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005208
|is_a=UBERON:0003978 ;;UBERON:0004120
|is_obsolete=
|located_in=
|located_in=
|name=right atrium valve
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002078
|part_of=UBERON:0002078
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="right atrium valves" RELATED PLURAL [EHDAA2:0000302];;"valve of right atrium" EXACT [EMAPA:17327]
|union_of=
|xref=EHDAA2:0000302;;EMAPA:17327;;MA:0001871
}}
}}

Latest revision as of 17:51, 12 September 2014

Name:right atrium valve
Namespace:FANTOM
Definition:"A valve that is part of a right atrium [Obol]." [OBOL:automatic]
Xrefs:
links:

EHDAA2:0000302
EMAPA:17327

MA:0001871
Synonyms: "right atrium valves" RELATED PLURAL [EHDAA2:0000302]
"valve of right atrium" EXACT [EMAPA:17327]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003978(valve),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0002078(right cardiac atrium)



Children

is a:UBERON:0002134 (tricuspid valve)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005208 (right atrium valve), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_b7480282123be9c03599b01f35b32a46p@chr15:86272097..86272099, +
5.42e-195FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_b7480282123be9c03599b01f35b32a46p@chr10:92678409..92678410, -
5.42e-195FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_b7480282123be9c03599b01f35b32a46p@chr10:92678409..92678410, -
5.42e-195FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_b7480282123be9c03599b01f35b32a46p@chr15:86272097..86272099, +
5.42e-195FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_b7480282123be9c03599b01f35b32a46p@chr5:99390735..99390743, -
5.42e-195FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_b7480282123be9c03599b01f35b32a46p@chr5:99390735..99390743, -
9.37e-99FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_27d9cb74d5df6effe76aa20503909e93p16@ASNS
9.37e-99FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_27d9cb74d5df6effe76aa20503909e93p@chr2:179656442..179656451, -
9.37e-99FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_27d9cb74d5df6effe76aa20503909e93p16@ASNS
9.37e-99FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_27d9cb74d5df6effe76aa20503909e93p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_16b6715464611945de6bf9a7d650c91ap@chr22:36000901..36000903, -
2.55e-98FFCP PHASE1:Hg19::chr14:68375236..68375240,+#_16b6715464611945de6bf9a7d650c91ap9@RAD51B
2.55e-98FFCP PHASE2:Hg19::chr6:70647888..70647891,+#_16b6715464611945de6bf9a7d650c91ap@chr6:70647888..70647891, +
2.55e-98FFCP PHASE2:Hg19::chr18:4003453..4003457,+#_16b6715464611945de6bf9a7d650c91ap@chr18:4003453..4003457, +
2.55e-98FFCP PHASE2:Hg19::chr2:103287330..103287331,+#_16b6715464611945de6bf9a7d650c91ap@chr2:103287330..103287331, +
2.55e-98FFCP PHASE2:Hg19::chr6:104898467..104898469,-#_16b6715464611945de6bf9a7d650c91ap@chr6:104898467..104898469, -
2.55e-98FFCP PHASE1:Hg19::chr6:70647888..70647891,+#_16b6715464611945de6bf9a7d650c91ap@chr6:70647888..70647891, +
2.55e-98FFCP PHASE1:Hg19::chr18:4003453..4003457,+#_16b6715464611945de6bf9a7d650c91ap@chr18:4003453..4003457, +
2.55e-98FFCP PHASE2:Hg19::chr8:24530708..24530710,+#_16b6715464611945de6bf9a7d650c91ap@chr8:24530708..24530710, +
2.55e-98FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_16b6715464611945de6bf9a7d650c91ap@chr2:103287330..103287331, +
2.55e-98FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_16b6715464611945de6bf9a7d650c91ap@chr6:104898467..104898469, -
2.55e-98FFCP PHASE1:Hg19::chr8:24530708..24530710,+#_16b6715464611945de6bf9a7d650c91ap@chr8:24530708..24530710, +
2.55e-98FFCP PHASE2:Hg19::chr5:157747715..157747717,+#_16b6715464611945de6bf9a7d650c91ap@chr5:157747715..157747717, +
2.55e-98FFCP PHASE2:Hg19::chr18:39821929..39821932,+#_16b6715464611945de6bf9a7d650c91ap@chr18:39821929..39821932, +
2.55e-98FFCP PHASE2:Hg19::chr14:68375236..68375240,+#_16b6715464611945de6bf9a7d650c91ap9@RAD51B
2.55e-98FFCP PHASE1:Hg19::chr5:157747715..157747717,+#_16b6715464611945de6bf9a7d650c91ap@chr5:157747715..157747717, +
2.55e-98FFCP PHASE1:Hg19::chr18:39821929..39821932,+#_16b6715464611945de6bf9a7d650c91ap@chr18:39821929..39821932, +
2.55e-98FFCP PHASE1:Hg19::chrX:136514398..136514433,-#_16b6715464611945de6bf9a7d650c91ap@chrX:136514398..136514433, -
2.55e-98FFCP PHASE2:Hg19::chrX:136514398..136514433,-#_16b6715464611945de6bf9a7d650c91ap@chrX:136514398..136514433, -
2.55e-98FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_16b6715464611945de6bf9a7d650c91ap@chr22:36000901..36000903, -
1.23e-66FFCP PHASE1:Hg19::chr2:123518588..123518591,+#_d5dc953c00ed57aa6e1820a3ece2955ap@chr2:123518588..123518591, +
1.23e-66FFCP PHASE2:Hg19::chr16:10783399..10783401,+#_d5dc953c00ed57aa6e1820a3ece2955ap@chr16:10783399..10783401, +
1.23e-66FFCP PHASE2:Hg19::chr2:26508626..26508627,+#_d5dc953c00ed57aa6e1820a3ece2955ap@chr2:26508626..26508627, +
1.23e-66FFCP PHASE1:Hg19::chr2:26508626..26508627,+#_d5dc953c00ed57aa6e1820a3ece2955ap@chr2:26508626..26508627, +
1.23e-66FFCP PHASE2:Hg19::chr5:99385820..99385831,-#_d5dc953c00ed57aa6e1820a3ece2955ap@chr5:99385820..99385831, -
1.23e-66FFCP PHASE1:Hg19::chr14:30786806..30786810,-#_d5dc953c00ed57aa6e1820a3ece2955ap@chr14:30786806..30786810, -
1.23e-66FFCP PHASE1:Hg19::chr5:99385820..99385831,-#_d5dc953c00ed57aa6e1820a3ece2955ap@chr5:99385820..99385831, -
1.23e-66FFCP PHASE2:Hg19::chr19:35531882..35531893,-#_d5dc953c00ed57aa6e1820a3ece2955ap@chr19:35531882..35531893, -
1.23e-66FFCP PHASE1:Hg19::chr2:218844837..218844842,-#_d5dc953c00ed57aa6e1820a3ece2955ap@chr2:218844837..218844842, -
1.23e-66FFCP PHASE1:Hg19::chr19:35531882..35531893,-#_d5dc953c00ed57aa6e1820a3ece2955ap@chr19:35531882..35531893, -
1.23e-66FFCP PHASE2:Hg19::chr2:218844837..218844842,-#_d5dc953c00ed57aa6e1820a3ece2955ap@chr2:218844837..218844842, -
1.23e-66FFCP PHASE1:Hg19::chr16:10783399..10783401,+#_d5dc953c00ed57aa6e1820a3ece2955ap@chr16:10783399..10783401, +
1.23e-66FFCP PHASE2:Hg19::chr17:77026478..77026512,+#_d5dc953c00ed57aa6e1820a3ece2955ap@chr17:77026478..77026512, +
1.23e-66FFCP PHASE2:Hg19::chr14:30786806..30786810,-#_d5dc953c00ed57aa6e1820a3ece2955ap@chr14:30786806..30786810, -
1.23e-66FFCP PHASE2:Hg19::chr2:123518588..123518591,+#_d5dc953c00ed57aa6e1820a3ece2955ap@chr2:123518588..123518591, +
1.23e-66FFCP PHASE1:Hg19::chr17:77026478..77026512,+#_d5dc953c00ed57aa6e1820a3ece2955ap@chr17:77026478..77026512, +
2.39e-66FFCP PHASE2:Hg19::chr19:7795730..7795740,-#_9918f77bd2fdeac77c8af39a6518ad15p5@CLEC4G
2.39e-66FFCP PHASE1:Hg19::chr3:135043585..135043591,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr3:135043585..135043591, -
2.39e-66FFCP PHASE2:Hg19::chr10:54464025..54464030,+#_9918f77bd2fdeac77c8af39a6518ad15p@chr10:54464025..54464030, +
2.39e-66FFCP PHASE1:Hg19::chr19:44414731..44414733,+#_9918f77bd2fdeac77c8af39a6518ad15p@chr19:44414731..44414733, +
2.39e-66FFCP PHASE1:Hg19::chr8:127508635..127508640,+#_9918f77bd2fdeac77c8af39a6518ad15p@chr8:127508635..127508640, +
2.39e-66FFCP PHASE2:Hg19::chr6:104465140..104465144,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr6:104465140..104465144, -
2.39e-66FFCP PHASE2:Hg19::chr8:127508635..127508640,+#_9918f77bd2fdeac77c8af39a6518ad15p@chr8:127508635..127508640, +
2.39e-66FFCP PHASE2:Hg19::chr10:63204408..63204412,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr10:63204408..63204412, -
2.39e-66FFCP PHASE1:Hg19::chr19:7795730..7795740,-#_9918f77bd2fdeac77c8af39a6518ad15p5@CLEC4G
2.39e-66FFCP PHASE1:Hg19::chr13:56591781..56591785,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr13:56591781..56591785, -
2.39e-66FFCP PHASE2:Hg19::chr5:175084679..175084689,+#_9918f77bd2fdeac77c8af39a6518ad15p4@HRH2
2.39e-66FFCP PHASE1:Hg19::chr6:104465140..104465144,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr6:104465140..104465144, -
2.39e-66FFCP PHASE1:Hg19::chr10:54464025..54464030,+#_9918f77bd2fdeac77c8af39a6518ad15p@chr10:54464025..54464030, +
2.39e-66FFCP PHASE1:Hg19::chr5:175084679..175084689,+#_9918f77bd2fdeac77c8af39a6518ad15p4@HRH2
2.39e-66FFCP PHASE2:Hg19::chr2:42043637..42043640,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr2:42043637..42043640, -
2.39e-66FFCP PHASE2:Hg19::chr7:54897467..54897468,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr7:54897467..54897468, -
2.39e-66FFCP PHASE2:Hg19::chr1:203150041..203150049,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr1:203150041..203150049, -
2.39e-66FFCP PHASE1:Hg19::chr10:63204408..63204412,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr10:63204408..63204412, -
2.39e-66FFCP PHASE1:Hg19::chr2:42043637..42043640,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr2:42043637..42043640, -
2.39e-66FFCP PHASE2:Hg19::chr18:40200823..40200829,+#_9918f77bd2fdeac77c8af39a6518ad15p@chr18:40200823..40200829, +
2.39e-66FFCP PHASE2:Hg19::chr2:238859791..238859796,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr2:238859791..238859796, -
2.39e-66FFCP PHASE2:Hg19::chr13:56591781..56591785,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr13:56591781..56591785, -
2.39e-66FFCP PHASE1:Hg19::chr7:54897467..54897468,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr7:54897467..54897468, -
2.39e-66FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr1:203150041..203150049, -
2.39e-66FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr1:1154360..1154365, -
2.39e-66FFCP PHASE1:Hg19::chr18:40200823..40200829,+#_9918f77bd2fdeac77c8af39a6518ad15p@chr18:40200823..40200829, +
2.39e-66FFCP PHASE2:Hg19::chr5:150006500..150006508,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr5:150006500..150006508, -
2.39e-66FFCP PHASE1:Hg19::chr2:238859791..238859796,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr2:238859791..238859796, -
2.39e-66FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr1:1154360..1154365, -
2.39e-66FFCP PHASE1:Hg19::chr5:150006500..150006508,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr5:150006500..150006508, -
2.39e-66FFCP PHASE2:Hg19::chr1:189481131..189481134,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr1:189481131..189481134, -
2.39e-66FFCP PHASE2:Hg19::chr1:1154830..1154841,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr1:1154830..1154841, -
2.39e-66FFCP PHASE1:Hg19::chr1:189481131..189481134,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr1:189481131..189481134, -
2.39e-66FFCP PHASE1:Hg19::chr1:1154830..1154841,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr1:1154830..1154841, -
2.39e-66FFCP PHASE2:Hg19::chr3:135043585..135043591,-#_9918f77bd2fdeac77c8af39a6518ad15p@chr3:135043585..135043591, -
2.39e-66FFCP PHASE2:Hg19::chr19:44414731..44414733,+#_9918f77bd2fdeac77c8af39a6518ad15p@chr19:44414731..44414733, +
4.66e-66FFCP PHASE2:Hg19::chr13:25345488..25345491,+#_c602c094dfd1356945d1f39a97f2dba1p@chr13:25345488..25345491, +
4.66e-66FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_c602c094dfd1356945d1f39a97f2dba1p9@NPPA
4.66e-66FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_c602c094dfd1356945d1f39a97f2dba1p9@NPPA
4.66e-66FFCP PHASE2:Hg19::chr10:37485037..37485044,+#_c602c094dfd1356945d1f39a97f2dba1p@chr10:37485037..37485044, +
4.66e-66FFCP PHASE2:Hg19::chr9:86211495..86211499,-#_c602c094dfd1356945d1f39a97f2dba1p1@ENST00000362613
4.66e-66FFCP PHASE2:Hg19::chr2:16526810..16526812,-#_c602c094dfd1356945d1f39a97f2dba1p@chr2:16526810..16526812, -
4.66e-66FFCP PHASE2:Hg19::chr3:39233987..39233993,-#_c602c094dfd1356945d1f39a97f2dba1p14@XIRP1
4.66e-66FFCP PHASE1:Hg19::chr9:86211495..86211499,-#_c602c094dfd1356945d1f39a97f2dba1p1@ENST00000362613
4.66e-66FFCP PHASE1:Hg19::chr2:16526810..16526812,-#_c602c094dfd1356945d1f39a97f2dba1p@chr2:16526810..16526812, -
4.66e-66FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_c602c094dfd1356945d1f39a97f2dba1p@chr1:11905799..11905806, -
4.66e-66FFCP PHASE2:Hg19::chr4:88042092..88042099,-#_c602c094dfd1356945d1f39a97f2dba1p@chr4:88042092..88042099, -
4.66e-66FFCP PHASE1:Hg19::chr10:37485037..37485044,+#_c602c094dfd1356945d1f39a97f2dba1p@chr10:37485037..37485044, +
4.66e-66FFCP PHASE1:Hg19::chr3:39233987..39233993,-#_c602c094dfd1356945d1f39a97f2dba1p14@XIRP1
4.66e-66FFCP PHASE1:Hg19::chr13:25345488..25345491,+#_c602c094dfd1356945d1f39a97f2dba1p@chr13:25345488..25345491, +
4.66e-66FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_c602c094dfd1356945d1f39a97f2dba1p@chr1:11905799..11905806, -
4.66e-66FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_c602c094dfd1356945d1f39a97f2dba1p@chr21:40459334..40459341, +
4.66e-66FFCP PHASE1:Hg19::chr4:88042092..88042099,-#_c602c094dfd1356945d1f39a97f2dba1p@chr4:88042092..88042099, -
4.66e-66FFCP PHASE1:Hg19::chr8:135501299..135501346,-#_c602c094dfd1356945d1f39a97f2dba1p@chr8:135501299..135501346, -

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