UBERON:0004572: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=arterial system | |name=arterial system | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004535 | |part_of=UBERON:0004535 | ||
Latest revision as of 17:46, 12 September 2014
| Name: | arterial system | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The arterial system is the higher-pressure portion of the circulatory system." [BTO:0004690] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0007798(vascular system) |
|---|---|
| part_of: | UBERON:0004535(cardiovascular system) |
Children
| part of: | UBERON:0001637 (artery),UBERON:0003509 (arterial blood vessel),UBERON:0004571 (systemic arterial system),UBERON:0004695 (arterial system smooth muscle),UBERON:0004700 (arterial system endothelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
... further results Mouse (Mus musculus)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004572 (arterial system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.46e-86 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_13df2de88104d0880a461a4bcf6ed6d3 | p6@Npy1r |
| 1.46e-86 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_13df2de88104d0880a461a4bcf6ed6d3 | p6@Npy1r |
| 6.62e-84 | FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_7615dacbdb97fd724c2901869aaeef95 | p2@SOX17 |
| 6.62e-84 | FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_7615dacbdb97fd724c2901869aaeef95 | p2@SOX17 |
| 5.83e-77 | FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_62c4c6bda2869e2e648ddcf2a7031a3e | p1@ENST00000439823 |
| 5.83e-77 | FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_62c4c6bda2869e2e648ddcf2a7031a3e | p1@ENST00000439823 |
| 6.68e-73 | FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_121bf81800a59c81207fd78d26132e0c | p4@MMP1 |
| 6.68e-73 | FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_121bf81800a59c81207fd78d26132e0c | p4@MMP1 |
| 9.34e-73 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_71c972b57cef990e8d9334a0f914a13d | p@chr4:7846444..7846449, - |
| 9.34e-73 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_71c972b57cef990e8d9334a0f914a13d | p@chr4:7846444..7846449, - |
| 1.67e-71 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_e5f26c2874b67bd91d87561b657a9190 | p@chr6:53359400..53359406, + |
| 1.67e-71 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_e5f26c2874b67bd91d87561b657a9190 | p@chr6:53359400..53359406, + |
| 8.51e-71 | FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_284b64ea4f38187d55b10805edb0daeb | p4@SULT1B1 |
| 8.51e-71 | FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_284b64ea4f38187d55b10805edb0daeb | p4@SULT1B1 |
| 1.15e-70 | FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_dce3d4312745715f6085c113d7868931 | p@chr22:21138313..21138336, + |
| 1.15e-70 | FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_dce3d4312745715f6085c113d7868931 | p@chr22:21138313..21138336, + |
| 1.58e-70 | FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_2cfa63035254608e15132a39b882fc73 | p3@SULT1B1 |
| 1.58e-70 | FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_2cfa63035254608e15132a39b882fc73 | p3@SULT1B1 |
| 2.66e-70 | FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_eae88f8f1ff351835c38ff63109c8903 | p@chr11:102667477..102667490, - |
| 2.66e-70 | FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_eae88f8f1ff351835c38ff63109c8903 | p@chr11:102667477..102667490, - |
| 7.36e-70 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_f49e02332dac794ff0ee4904a19f1d5b | p5@Npy1r |
| 7.36e-70 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_f49e02332dac794ff0ee4904a19f1d5b | p5@Npy1r |
| 9.2e-70 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_d04e86079b2e93405bdeced8a711b1ad | p@chr11:102661517..102661541, - |
| 9.2e-70 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_d04e86079b2e93405bdeced8a711b1ad | p@chr11:102661517..102661541, - |
| 2.47e-69 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_7413fe77373b844a675586cc703a78f0 | p@chr2:65009852..65009866, - |
| 2.47e-69 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_7413fe77373b844a675586cc703a78f0 | p@chr2:65009852..65009866, - |
| 3.23e-69 | FFCP PHASE1:Hg19::chr4:54931911..54931926,-#_c0da1ac13fffd53607eb1cb9cee5b997 | p@chr4:54931911..54931926, - |
| 3.23e-69 | FFCP PHASE2:Hg19::chr4:54931911..54931926,-#_c0da1ac13fffd53607eb1cb9cee5b997 | p@chr4:54931911..54931926, - |
| 9.21e-69 | FFCP PHASE1:Hg19::chr14:23236579..23236596,+#_b6aa936dfc031b36f6352517f2ff0538 | p5@OXA1L |
| 9.21e-69 | FFCP PHASE2:Hg19::chr14:23236579..23236596,+#_b6aa936dfc031b36f6352517f2ff0538 | p5@OXA1L |
| 1.74e-68 | FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_cb67c589d08c02dc09e6b6d92c5aa49f | p@chr3:30334038..30334060, + |
| 1.74e-68 | FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_cb67c589d08c02dc09e6b6d92c5aa49f | p@chr3:30334038..30334060, + |
| 3.58e-68 | FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_45d92eb8e10317c65c04d423365cb8df | p24@WWTR1 |
| 3.58e-68 | FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_45d92eb8e10317c65c04d423365cb8df | p24@WWTR1 |
| 1.03e-67 | FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_9a7473b9bb6a3ea2a6a93a88474e3b7b | p@chr22:21138343..21138378, + |
| 1.03e-67 | FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_9a7473b9bb6a3ea2a6a93a88474e3b7b | p@chr22:21138343..21138378, + |
| 2.74e-67 | FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_1ec40654d797f1c7a846f689078b7632 | p3@MMP1 |
| 2.74e-67 | FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_1ec40654d797f1c7a846f689078b7632 | p3@MMP1 |
| 1.26e-66 | FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_03ad6a2d4f0b447485e85772b86472c9 | p@chr11:102668178..102668206, + |
| 1.26e-66 | FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_03ad6a2d4f0b447485e85772b86472c9 | p@chr11:102668178..102668206, + |
| 4.64e-66 | FFCP PHASE2:Hg19::chr11:102668016..102668028,-#_34d0abf5c22f1fed046e597ac92ce6b7 | p5@MMP1 |
| 4.64e-66 | FFCP PHASE1:Hg19::chr11:102668016..102668028,-#_34d0abf5c22f1fed046e597ac92ce6b7 | p5@MMP1 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_bdb35e22f665fac53a38e0821847d151 | p@chr2:178190171..178190178, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_bdb35e22f665fac53a38e0821847d151 | p@chr2:178190171..178190178, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_bdb35e22f665fac53a38e0821847d151 | p@chr17:14827154..14827169, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_bdb35e22f665fac53a38e0821847d151 | p@chrX:160839744..160839754, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_bdb35e22f665fac53a38e0821847d151 | p@chr17:14802633..14802637, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_bdb35e22f665fac53a38e0821847d151 | p@chr2:112043522..112043530, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_bdb35e22f665fac53a38e0821847d151 | p5@Adamts2 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_bdb35e22f665fac53a38e0821847d151 | p@chr8:69228447..69228492, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_bdb35e22f665fac53a38e0821847d151 | p@chr17:87574327..87574332, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_bdb35e22f665fac53a38e0821847d151 | p@chr17:14827154..14827169, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_bdb35e22f665fac53a38e0821847d151 | p@chr17:87574327..87574332, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_bdb35e22f665fac53a38e0821847d151 | p@chr17:14802633..14802637, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_bdb35e22f665fac53a38e0821847d151 | p@chr2:112043522..112043530, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_bdb35e22f665fac53a38e0821847d151 | p5@Adamts2 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_bdb35e22f665fac53a38e0821847d151 | p@chr8:69228447..69228492, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_bdb35e22f665fac53a38e0821847d151 | p@chrX:160839744..160839754, + |
| 1.11e-64 | FFCP PHASE2:Hg19::chr11:102668708..102668742,+#_81ee5306ca4b6eb15bb55a2c4e56d0ec | p@chr11:102668708..102668742, + |
| 1.11e-64 | FFCP PHASE1:Hg19::chr11:102668708..102668742,+#_81ee5306ca4b6eb15bb55a2c4e56d0ec | p@chr11:102668708..102668742, + |
| 9.18e-63 | FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_1cef6ffdfead37f724550c8e5d1aa4ac | p@chr11:102662162..102662217, - |
| 9.18e-63 | FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_1cef6ffdfead37f724550c8e5d1aa4ac | p@chr11:102662162..102662217, - |
| 1.65e-60 | FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_44271b917661da54875c665cd6356848 | p@chr12:96830430..96830450, + |
| 1.65e-60 | FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_44271b917661da54875c665cd6356848 | p@chr12:96830430..96830450, + |
| 6.48e-58 | FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_5e880b390c2df41934c5ee918095b6d7 | p@chr10:4823096..4823144, - |
| 6.48e-58 | FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_5e880b390c2df41934c5ee918095b6d7 | p@chr10:4823096..4823144, - |
| 3.35e-57 | FFCP PHASE2:Hg19::chr11:102661061..102661115,-#_006118f5165cad4dc5578dab847069cd | p@chr11:102661061..102661115, - |
| 3.35e-57 | FFCP PHASE1:Hg19::chr11:102661061..102661115,-#_006118f5165cad4dc5578dab847069cd | p@chr11:102661061..102661115, - |
| 1.03e-56 | FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_f0ce3f9622e985ca24500a3c855cce63 | p@chr3:106484411..106484418, + |
| 1.03e-56 | FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_f0ce3f9622e985ca24500a3c855cce63 | p@chr3:106484411..106484418, + |
| 6.26e-56 | FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_9d52a7e33fe43a34acb37e3cdb2eb4df | p2@ESM1 |
| 6.26e-56 | FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_9d52a7e33fe43a34acb37e3cdb2eb4df | p2@ESM1 |
| 1.54e-55 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_b8f0f09e28a9b72b42d91cf02687d6e0 | p@chr2:134548872..134548879, - |
| 1.54e-55 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_b8f0f09e28a9b72b42d91cf02687d6e0 | p@chr2:134548872..134548879, - |
| 3.85e-55 | FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_9d6902b4d057b1782c12318814ec54f2 | p8@HHIP |
| 3.85e-55 | FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_9d6902b4d057b1782c12318814ec54f2 | p8@HHIP |
| 4.21e-55 | FFCP PHASE2:Hg19::chr11:102663449..102663467,-#_4235e203993e192ab4c5200dc5c6fcd3 | p@chr11:102663449..102663467, - |
| 4.21e-55 | FFCP PHASE1:Hg19::chr11:102663449..102663467,-#_4235e203993e192ab4c5200dc5c6fcd3 | p@chr11:102663449..102663467, - |
| 7.65e-55 | FFCP PHASE1:Hg19::chr11:102667434..102667447,-#_9d30ea0a46c171748758c83bc7cec514 | p@chr11:102667434..102667447, - |
| 7.65e-55 | FFCP PHASE2:Hg19::chr11:102667434..102667447,-#_9d30ea0a46c171748758c83bc7cec514 | p@chr11:102667434..102667447, - |
| 2.37e-54 | FFCP PHASE1:Hg19::chr15:39544232..39544238,+#_7ad49b744e83d980bc27a0a03079593b | p@chr15:39544232..39544238, + |
| 2.37e-54 | FFCP PHASE2:Hg19::chr15:39544232..39544238,+#_7ad49b744e83d980bc27a0a03079593b | p@chr15:39544232..39544238, + |
| 7.57e-54 | FFCP PHASE1:Hg19::chr11:102667504..102667527,-#_3112a8e690702aaca2d68a673def8f01 | p@chr11:102667504..102667527, - |
| 7.57e-54 | FFCP PHASE2:Hg19::chr11:102667504..102667527,-#_3112a8e690702aaca2d68a673def8f01 | p@chr11:102667504..102667527, - |
| 1.03e-53 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_736d7a24ac2628b0eb4ce3970013181d | p@chr4:74703497..74703511, + |
| 1.03e-53 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_736d7a24ac2628b0eb4ce3970013181d | p@chr4:74703497..74703511, + |
| 1.19e-53 | FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_c702b8756b61c37beee02deed753d057 | p@chr4:54931877..54931892, - |
| 1.19e-53 | FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_c702b8756b61c37beee02deed753d057 | p@chr4:54931877..54931892, - |
| 2.25e-53 | FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_230c7fe4246d4228befe9681a6b4593a | p@chr1:186946626..186946652, + |
| 2.25e-53 | FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_230c7fe4246d4228befe9681a6b4593a | p@chr1:186946626..186946652, + |
| 4.23e-52 | FFCP PHASE2:Hg19::chr4:145567538..145567544,+#_35bab749e7ec8d2a2715a8813cdc34be | p13@HHIP |
| 4.23e-52 | FFCP PHASE1:Hg19::chr4:145567538..145567544,+#_35bab749e7ec8d2a2715a8813cdc34be | p13@HHIP |
| 6.05e-52 | FFCP PHASE2:Hg19::chr11:12182490..12182503,+#_bc76db24e087d79d3c0ae6379c7acdd4 | p8@MICAL2 |
| 6.05e-52 | FFCP PHASE1:Hg19::chr11:12182490..12182503,+#_bc76db24e087d79d3c0ae6379c7acdd4 | p8@MICAL2 |
| 5.22e-51 | FFCP PHASE2:Hg19::chr8:90556171..90556173,+#_5595b150193cdeb65c9dc3f5b8410055 | p@chr8:90556171..90556173, + |
| 5.22e-51 | FFCP PHASE1:Hg19::chr8:90556171..90556173,+#_5595b150193cdeb65c9dc3f5b8410055 | p@chr8:90556171..90556173, + |
| 9.34e-51 | FFCP PHASE1:Mm9::chr17:75578018..75578028,+#_ed8490075c43613d612cc77a87705808 | p14@Ltbp1 |
| 9.34e-51 | FFCP PHASE2:Mm9::chr17:75578018..75578028,+#_ed8490075c43613d612cc77a87705808 | p14@Ltbp1 |
| 1.21e-50 | FFCP PHASE1:Hg19::chr2:228735763..228735772,+#_b48a4faef8a4c469b5e2ebbfebe61ed9 | p2@WDR69 |
| 1.21e-50 | FFCP PHASE2:Hg19::chr2:228735763..228735772,+#_b48a4faef8a4c469b5e2ebbfebe61ed9 | p2@WDR69 |
