UBERON:0003269: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A portion of skeletal muscle tissue that is part of a eye [Obol]." [OBOL:automatic] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0003269 | |||
|is_a=UBERON:0001134 ;;UBERON:0004121 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=skeletal muscle tissue of eye | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000019 | |part_of=UBERON:0000019 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="eye skeletal muscle" EXACT [OBOL:automatic];;"eye skeletal muscle group" RELATED [EHDAA2:0000486];;"eye skeletal muscle tissue" EXACT [OBOL:automatic];;"skeletal muscle tissue of eye" EXACT [OBOL:automatic] | ||
|union_of= | |||
|xref=EHDAA2:0000486;;EHDAA:2923;;EMAPA:17844 | |||
}} | }} | ||
Latest revision as of 17:39, 12 September 2014
| Name: | skeletal muscle tissue of eye | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A portion of skeletal muscle tissue that is part of a eye [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"eye skeletal muscle" EXACT [OBOL:automatic] "eye skeletal muscle group" RELATED [EHDAA2:0000486] "eye skeletal muscle tissue" EXACT [OBOL:automatic] "skeletal muscle tissue of eye" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001134(skeletal muscle tissue),UBERON:0004121(ectoderm-derived structure) |
|---|---|
| part_of: | UBERON:0000019(camera-type eye) |
Children
| part of: | UBERON:0001601 (extra-ocular muscle),UBERON:0006230 (extrinsic ocular pre-muscle mass) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10300-104H3
- 10328-105B4
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003269 (skeletal muscle tissue of eye), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
