Personal tools

UBERON:0002330: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0002330
|alt_id=UBERON:FMA_85539-MA_0002411
|name=exocrine system
|namespace=
|def="Anatomical system that consists of the glands and parts of glands that produce exocrine secretions and help to integrate and control bodily metabolic activity. Exocrine glands are glands that secrete their products (hormones) into ducts (duct glands). They are the counterparts to endocrine glands, which secrete their products (hormones) directly into the bloodstream (ductless glands) or release hormones (paracrines) that affect only target cells nearby the release site. [Wikipedia]." [Wikipedia:Exocrine_gland]
|xref=EHDAA2:0002225;;FMA:85539;;MA:0002411;;ncithesaurus:Exocrine_System
|is_a=UBERON:0000467
|synonym="exocrine glandular system" EXACT [EHDAA2:0002225]
|comment=
|comment=
|alt_id=UBERON:FMA_85539-MA_0002411
|disjoint_from=UBERON:0002390;;UBERON:0002405;;UBERON:0002416;;UBERON:0002423;;UBERON:0004456
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Anatomical system that consists of the glands and parts of glands that produce exocrine secretions and help to integrate and control bodily metabolic activity. Exocrine glands are glands that secrete their products (hormones) into ducts (duct glands). They are the counterparts to endocrine glands, which secrete their products (hormones) directly into the bloodstream (ductless glands) or release hormones (paracrines) that affect only target cells nearby the release site. [Wikipedia]." [Wikipedia:Exocrine_gland]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=UBERON:0002390;;UBERON:0002405;;UBERON:0002416;;UBERON:0002423;;UBERON:0004456
|has_quality=
|has_quality=
|id=UBERON:0002330
|is_a=UBERON:0000467
|is_obsolete=
|located_in=
|located_in=
|name=exocrine system
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="exocrine glandular system" EXACT [EHDAA2:0002225]
|union_of=
|xref=EHDAA2:0002225;;FMA:85539;;MA:0002411;;ncithesaurus:Exocrine_System
}}
}}

Latest revision as of 17:29, 12 September 2014

Name:exocrine system
Namespace:FANTOM
Definition:"Anatomical system that consists of the glands and parts of glands that produce exocrine secretions and help to integrate and control bodily metabolic activity. Exocrine glands are glands that secrete their products (hormones) into ducts (duct glands). They are the counterparts to endocrine glands, which secrete their products (hormones) directly into the bloodstream (ductless glands) or release hormones (paracrines) that affect only target cells nearby the release site. [Wikipedia]." [Wikipedia:Exocrine_gland]
Xrefs:
links:

EHDAA2:0002225
FMA:85539
MA:0002411

ncithesaurus:Exocrine_System
Synonyms: "exocrine glandular system" EXACT [EHDAA2:0002225]
Alt_id: UBERON:FMA_85539-MA_0002411
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000467(anatomical system)
disjoint_from:UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system)
part of:UBERON:0001044 (saliva-secreting gland),UBERON:0001821 (sebaceous gland),UBERON:0001829 (major salivary gland),UBERON:0002107 (liver),UBERON:0002365 (exocrine gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002330 (exocrine system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.59e-63FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_a83b3bc168a916ea0e0368f017aac7d4p@chr5:90897694..90897705, +
1.59e-63FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_a83b3bc168a916ea0e0368f017aac7d4p@chr5:90897694..90897705, +
2.67e-63FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_563f2f8150d6a45704bdc824a93d380dp@chr19:25169885..25169900, +
2.67e-63FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_563f2f8150d6a45704bdc824a93d380dp@chr19:25169885..25169900, +
3.55e-62FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_95af9aa6fe7e2ce4d77b9fac96ece19dp6@Insc
3.55e-62FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_95af9aa6fe7e2ce4d77b9fac96ece19dp6@Insc
8.42e-62FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_f70b57801d7cbed19b6dc3292c59d2e2p2@uc009nzu.1
8.42e-62FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_f70b57801d7cbed19b6dc3292c59d2e2p2@uc009nzu.1
1.17e-61FFCP PHASE1:Mm9::chr3:151770161..151770165,-#_f8cd809d289b6a19e04d97a02b7b5cbcp3@Gipc2
1.17e-61FFCP PHASE2:Mm9::chr3:151770161..151770165,-#_f8cd809d289b6a19e04d97a02b7b5cbcp3@Gipc2
5.14e-60FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_91f75b023aba8f2ac474dbabe060da64p5@Bhmt
5.14e-60FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_91f75b023aba8f2ac474dbabe060da64p5@Bhmt
9.96e-60FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_8c7c9ae5771627117609846f1f9067b9p@chr1:162917234..162917248, +
9.96e-60FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_8c7c9ae5771627117609846f1f9067b9p@chr1:162917234..162917248, +
1.24e-59FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_5bcc45df8c2e56a0731b6a3c449eb70fp1@Rtp3
1.24e-59FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_5bcc45df8c2e56a0731b6a3c449eb70fp1@Rtp3
6.16e-59FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_215d04298e678c9ad0ce51c241fb3d5bp2@Rtp3
6.16e-59FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_215d04298e678c9ad0ce51c241fb3d5bp@chr7:112744083..112744109, -
6.16e-59FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_215d04298e678c9ad0ce51c241fb3d5bp2@Rtp3
6.16e-59FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_215d04298e678c9ad0ce51c241fb3d5bp@chr7:112744083..112744109, -
1.28e-58FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_0bb7754690eeb3feb582cdb5a6173559p@chr13:23928766..23928779, +
1.28e-58FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_0bb7754690eeb3feb582cdb5a6173559p@chr13:23928766..23928779, +
1.51e-58FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_6f37aef66d8ddc56c561bd89b92d545ep3@Blvrb
1.51e-58FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_6f37aef66d8ddc56c561bd89b92d545ep3@Blvrb
2.45e-58FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_1aa604b1b76effe9d7be42fbfdf995a9p@chr12:105004018..105004046, -
2.45e-58FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_1aa604b1b76effe9d7be42fbfdf995a9p@chr2:10041210..10041222, -
2.45e-58FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_1aa604b1b76effe9d7be42fbfdf995a9p@chr16:22894900..22894910, +
2.45e-58FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_1aa604b1b76effe9d7be42fbfdf995a9p@chr16:22894900..22894910, +
2.45e-58FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_1aa604b1b76effe9d7be42fbfdf995a9p@chr6:128436166..128436185, -
2.45e-58FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_1aa604b1b76effe9d7be42fbfdf995a9p@chr6:128436166..128436185, -
2.45e-58FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_1aa604b1b76effe9d7be42fbfdf995a9p@chr12:105004018..105004046, -
2.45e-58FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_1aa604b1b76effe9d7be42fbfdf995a9p@chr2:10041210..10041222, -
2.45e-58FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_1aa604b1b76effe9d7be42fbfdf995a9p@chr16:22898981..22898988, -
2.45e-58FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_1aa604b1b76effe9d7be42fbfdf995a9p@chr16:22898981..22898988, -
1.47e-56FFCP PHASE1:Mm9::chr1:173155793..173155841,+#_7ff28d4661d00325b862ca7a175f36b2p@chr1:173155793..173155841, +
1.47e-56FFCP PHASE2:Mm9::chr1:173155793..173155841,+#_7ff28d4661d00325b862ca7a175f36b2p@chr1:173155793..173155841, +
1.7e-56FFCP PHASE1:Mm9::chr17:12584645..12584657,+#_9a54ca86e52d5a5db751cd9c50a654dcp@chr17:12584645..12584657, +
1.7e-56FFCP PHASE2:Mm9::chr17:12584645..12584657,+#_9a54ca86e52d5a5db751cd9c50a654dcp@chr17:12584645..12584657, +
1.96e-56FFCP PHASE2:Mm9::chr1:166179426..166179437,+#_8cda0c948b19bc1adadeeba30ef9fa29p@chr1:166179426..166179437, +
1.96e-56FFCP PHASE1:Mm9::chr1:166179426..166179437,+#_8cda0c948b19bc1adadeeba30ef9fa29p@chr1:166179426..166179437, +
2.19e-56FFCP PHASE1:Mm9::chr17:12588483..12588503,+#_2da93c381c6104e9564898c4253de3f5p@chr17:12588483..12588503, +
2.19e-56FFCP PHASE2:Mm9::chr17:12588483..12588503,+#_2da93c381c6104e9564898c4253de3f5p@chr17:12588483..12588503, +
2.67e-56FFCP PHASE2:Mm9::chr8:34917332..34917357,-#_2fbe76080837145b442ff4c8c9b0eac2p@chr8:34917332..34917357, -
2.67e-56FFCP PHASE1:Mm9::chr8:34917332..34917357,-#_2fbe76080837145b442ff4c8c9b0eac2p@chr8:34917332..34917357, -
4.7e-56FFCP PHASE1:Mm9::chr19:38191263..38191291,-#_aa7be93767d17cc5f330884edd05d344p@chr19:38191263..38191291, -
4.7e-56FFCP PHASE2:Mm9::chr19:38191263..38191291,-#_aa7be93767d17cc5f330884edd05d344p@chr19:38191263..38191291, -
8.1e-56FFCP PHASE1:Mm9::chr7:121912266..121912277,+#_d055139ecc69b3a1dfc4ab7855aed148p8@Insc
8.1e-56FFCP PHASE2:Mm9::chr7:121912266..121912277,+#_d055139ecc69b3a1dfc4ab7855aed148p8@Insc
9.43e-56FFCP PHASE1:Mm9::chr5:90893974..90893978,+#_a624e12a8390cc0376496203573407edp@chr5:90893974..90893978, +
9.43e-56FFCP PHASE2:Mm9::chr5:90893974..90893978,+#_a624e12a8390cc0376496203573407edp@chr5:90893974..90893978, +
1.38e-55FFCP PHASE1:Mm9::chr8:131012475..131012492,-#_4a5abbc37f0455e54f393497f5d0068ep1@uc009nzu.1
1.38e-55FFCP PHASE2:Mm9::chr8:131012475..131012492,-#_4a5abbc37f0455e54f393497f5d0068ep1@uc009nzu.1
1.42e-55FFCP PHASE2:Mm9::chr9:103123272..103123283,-#_870a5bbeccc4d6174d4c5af6b1c30799p@chr9:103123272..103123283, -
1.42e-55FFCP PHASE1:Mm9::chr9:103123272..103123283,-#_870a5bbeccc4d6174d4c5af6b1c30799p@chr9:103123272..103123283, -
1.48e-55FFCP PHASE1:Mm9::chr9:103127494..103127503,-#_52273ac0d115eb39f51840e64653725dp@chr9:103127494..103127503, -
1.48e-55FFCP PHASE2:Mm9::chr9:103127494..103127503,-#_52273ac0d115eb39f51840e64653725dp@chr9:103127494..103127503, -
1.48e-55FFCP PHASE1:Mm9::chr8:46380208..46380217,-#_52273ac0d115eb39f51840e64653725dp3@Klkb1
1.48e-55FFCP PHASE2:Mm9::chr8:46380208..46380217,-#_52273ac0d115eb39f51840e64653725dp3@Klkb1
1.6e-55FFCP PHASE1:Mm9::chr3:57191661..57191672,-#_a41ffa3066238a47db31ac7a3630e339p@chr3:57191661..57191672, -
1.6e-55FFCP PHASE2:Mm9::chr3:57191661..57191672,-#_a41ffa3066238a47db31ac7a3630e339p@chr3:57191661..57191672, -
1.73e-55FFCP PHASE1:Mm9::chr3:82814412..82814431,+#_0bfc1432a7732a69b70be90e53343f96p@chr3:82814412..82814431, +
1.73e-55FFCP PHASE2:Mm9::chr3:82814412..82814431,+#_0bfc1432a7732a69b70be90e53343f96p@chr3:82814412..82814431, +
2.28e-55FFCP PHASE2:Mm9::chr17:12583153..12583171,+#_3e5fb121887637dfc127ccbc36d56e58p@chr17:12583153..12583171, +
2.28e-55FFCP PHASE1:Mm9::chr17:12583153..12583171,+#_3e5fb121887637dfc127ccbc36d56e58p@chr17:12583153..12583171, +
2.71e-55FFCP PHASE1:Mm9::chr5:93000570..93000589,+#_24b05ad3f4d3a862dbd203b7c7522da1p3@Fam47e
2.71e-55FFCP PHASE2:Mm9::chr5:93000570..93000589,+#_24b05ad3f4d3a862dbd203b7c7522da1p3@Fam47e
3.2e-55FFCP PHASE1:Mm9::chr9:103123293..103123304,-#_aecf2ab792f40d6971c6206260c58e2dp@chr9:103123293..103123304, -
3.2e-55FFCP PHASE2:Mm9::chr9:103123293..103123304,-#_aecf2ab792f40d6971c6206260c58e2dp@chr9:103123293..103123304, -
3.25e-55FFCP PHASE1:Mm9::chr15:77605636..77605639,+#_7df75b606a12179b27c1cd35a3a8d299p@chr15:77605636..77605639, +
3.25e-55FFCP PHASE1:Mm9::chr8:92849825..92849837,-#_7df75b606a12179b27c1cd35a3a8d299p@chr8:92849825..92849837, -
3.25e-55FFCP PHASE1:Mm9::chr3:82835513..82835525,+#_7df75b606a12179b27c1cd35a3a8d299p@chr3:82835513..82835525, +
3.25e-55FFCP PHASE2:Mm9::chr8:92849825..92849837,-#_7df75b606a12179b27c1cd35a3a8d299p@chr8:92849825..92849837, -
3.25e-55FFCP PHASE1:Mm9::chr16:23449901..23449906,-#_7df75b606a12179b27c1cd35a3a8d299p@chr16:23449901..23449906, -
3.25e-55FFCP PHASE2:Mm9::chr15:77605636..77605639,+#_7df75b606a12179b27c1cd35a3a8d299p@chr15:77605636..77605639, +
3.25e-55FFCP PHASE1:Mm9::chr16:22895330..22895339,-#_7df75b606a12179b27c1cd35a3a8d299p@chr16:22895330..22895339, -
3.25e-55FFCP PHASE2:Mm9::chr3:82835513..82835525,+#_7df75b606a12179b27c1cd35a3a8d299p@chr3:82835513..82835525, +
3.25e-55FFCP PHASE2:Mm9::chr16:23449901..23449906,-#_7df75b606a12179b27c1cd35a3a8d299p@chr16:23449901..23449906, -
3.25e-55FFCP PHASE2:Mm9::chr16:22895330..22895339,-#_7df75b606a12179b27c1cd35a3a8d299p@chr16:22895330..22895339, -
3.8e-55FFCP PHASE2:Mm9::chr16:22896674..22896687,-#_624e184d4036cd12c7b7153ce77f9468p@chr16:22896674..22896687, -
3.8e-55FFCP PHASE1:Mm9::chr16:22896674..22896687,-#_624e184d4036cd12c7b7153ce77f9468p@chr16:22896674..22896687, -
4.12e-55FFCP PHASE1:Mm9::chr17:12577256..12577270,+#_4bff790cf7e7ab6b5200d33356673ca7p@chr17:12577256..12577270, +
4.12e-55FFCP PHASE2:Mm9::chr17:12577256..12577270,+#_4bff790cf7e7ab6b5200d33356673ca7p@chr17:12577256..12577270, +
6.3e-55FFCP PHASE1:Mm9::chr17:32822530..32822541,+#_07353ac89b9c784c0c52f483da2d9d3dp2@Cyp4f15
6.3e-55FFCP PHASE2:Mm9::chr17:32822530..32822541,+#_07353ac89b9c784c0c52f483da2d9d3dp2@Cyp4f15
6.84e-55FFCP PHASE2:Mm9::chr11:46512551..46512577,-#_b94876ed2fb61a654d6a440c9d71be55p5@Timd2
6.84e-55FFCP PHASE1:Mm9::chr6:128436196..128436215,-#_b94876ed2fb61a654d6a440c9d71be55p@chr6:128436196..128436215, -
6.84e-55FFCP PHASE2:Mm9::chr12:105002005..105002050,-#_b94876ed2fb61a654d6a440c9d71be55p@chr12:105002005..105002050, -
6.84e-55FFCP PHASE2:Mm9::chr12:105066241..105066272,-#_b94876ed2fb61a654d6a440c9d71be55p1@Serpina1b
6.84e-55FFCP PHASE1:Mm9::chr11:46512551..46512577,-#_b94876ed2fb61a654d6a440c9d71be55p5@Timd2
6.84e-55FFCP PHASE2:Mm9::chr3:82847318..82847329,-#_b94876ed2fb61a654d6a440c9d71be55p@chr3:82847318..82847329, -
6.84e-55FFCP PHASE1:Mm9::chr12:105066241..105066272,-#_b94876ed2fb61a654d6a440c9d71be55p1@Serpina1b
6.84e-55FFCP PHASE2:Mm9::chr6:11948347..11948351,-#_b94876ed2fb61a654d6a440c9d71be55p@chr6:11948347..11948351, -
6.84e-55FFCP PHASE2:Mm9::chr6:128436196..128436215,-#_b94876ed2fb61a654d6a440c9d71be55p@chr6:128436196..128436215, -
6.84e-55FFCP PHASE1:Mm9::chr16:22899236..22899246,+#_b94876ed2fb61a654d6a440c9d71be55p@chr16:22899236..22899246, +
6.84e-55FFCP PHASE1:Mm9::chr6:128438012..128438027,-#_b94876ed2fb61a654d6a440c9d71be55p@chr6:128438012..128438027, -
6.84e-55FFCP PHASE2:Mm9::chr16:22895286..22895297,-#_b94876ed2fb61a654d6a440c9d71be55p@chr16:22895286..22895297, -
6.84e-55FFCP PHASE1:Mm9::chr16:22895286..22895297,-#_b94876ed2fb61a654d6a440c9d71be55p@chr16:22895286..22895297, -
6.84e-55FFCP PHASE2:Mm9::chr12:105003025..105003036,-#_b94876ed2fb61a654d6a440c9d71be55p@chr12:105003025..105003036, -
6.84e-55FFCP PHASE1:Mm9::chr6:11948347..11948351,-#_b94876ed2fb61a654d6a440c9d71be55p@chr6:11948347..11948351, -
6.84e-55FFCP PHASE1:Mm9::chr16:22899322..22899331,+#_b94876ed2fb61a654d6a440c9d71be55p@chr16:22899322..22899331, +