UBERON:0001803: Difference between revisions
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|located_in= | |located_in= | ||
|name=epithelium of lens | |name=epithelium of lens | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000965 | |part_of=UBERON:0000965 | ||
Latest revision as of 17:20, 12 September 2014
| Name: | epithelium of lens | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The cells of the lens epithelium regulate most of the homeostatic functions of the lens.[6] As ions, nutrients, and liquid enter the lens from the aqueous humor, Na+/K+ ATPase pumps in the lens epithelial cells pump ions out of the lens to maintain appropriate lens osmolarity and volume, with equatorially positioned lens epithelium cells contributing most to this current. The activity of the Na+/K+ ATPases keeps water and current flowing through the lens from the poles and exiting through the equatorial regions." [Wikipedia:Lens_(anatomy)#Lens_Epithelium] | ||
| Xrefs: |
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| Synonyms: |
"epithelial tissue of eye lens" EXACT [OBOL:automatic] "epithelial tissue of lens" EXACT [OBOL:automatic] "epithelium lentis" EXACT [FMA:58871, FMA:TA] "epithelium of eye lens" EXACT [OBOL:automatic] "eye lens epithelial tissue" EXACT [OBOL:automatic] "eye lens epithelium" EXACT [OBOL:automatic] "lens epithelial tissue" EXACT [OBOL:automatic] "lens epithelium" EXACT [] | ||
| Comments: | Usage notes: this class is the superclass of the anterior epithelium and equatorial epithlium, although the term 'lens epithelium' may refer specifically to the former | ||
| Alt_id: | UBERON:FMA_58871-MA_0001301-ZFA_0001326 | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000484(simple cuboidal epithelium),UBERON:0015808(eye epithelium) |
|---|---|
| part_of: | UBERON:0000965(lens of camera-type eye) |
Children
| part of: | CL:0002224 (lens epithelial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 11529-119I8 (Lens Epithelial Cells, donor1)
- 11609-120I7 (Lens Epithelial Cells, donor2)
- 11690-122I7 (Lens Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001803 (epithelium of lens), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.41e-88 | FFCP PHASE2:Hg19::chr22:25595823..25595826,+#_83d2b9028d42a0176aed984c351cfb53 | p1@CRYBB3 |
| 1.41e-88 | FFCP PHASE1:Hg19::chr22:25595823..25595826,+#_83d2b9028d42a0176aed984c351cfb53 | p1@CRYBB3 |
| 3.32e-74 | FFCP PHASE1:Hg19::chr22:25615600..25615611,+#_fc93bec4341434b7f9026f77ea5c26d2 | p1@CRYBB2 |
| 3.32e-74 | FFCP PHASE2:Hg19::chr22:25615600..25615611,+#_fc93bec4341434b7f9026f77ea5c26d2 | p1@CRYBB2 |
| 5.48e-74 | FFCP PHASE1:Hg19::chr19:51891222..51891233,-#_afaaa2e0f09d186d3e6f652807941ab4 | p1@LIM2 |
| 5.48e-74 | FFCP PHASE2:Hg19::chr19:51891222..51891233,-#_afaaa2e0f09d186d3e6f652807941ab4 | p1@LIM2 |
| 3.8e-56 | FFCP PHASE2:Hg19::chr22:27017921..27017928,+#_bbb3aa727743016e315b7819325987d5 | p1@CRYBA4 |
| 3.8e-56 | FFCP PHASE1:Hg19::chr22:27017921..27017928,+#_bbb3aa727743016e315b7819325987d5 | p1@CRYBA4 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:104778247..104778293,+#_21b3868d1fa32818d4e34ce31952615e | p@chr13:104778247..104778293, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:104778247..104778293,+#_21b3868d1fa32818d4e34ce31952615e | p@chr13:104778247..104778293, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:61204240..61204241,+#_21b3868d1fa32818d4e34ce31952615e | p@chr20:61204240..61204241, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:61204240..61204241,+#_21b3868d1fa32818d4e34ce31952615e | p@chr20:61204240..61204241, + |
| 5.14e-50 | FFCP PHASE2:Hg19::chr14:37642016..37642022,-#_7dc0b6ba3c7ab60d734c8495dc4f43a0 | p7@SLC25A21 |
| 5.14e-50 | FFCP PHASE1:Hg19::chr14:37642016..37642022,-#_7dc0b6ba3c7ab60d734c8495dc4f43a0 | p7@SLC25A21 |
| 5.14e-50 | FFCP PHASE2:Hg19::chr21:44592820..44592840,-#_7dc0b6ba3c7ab60d734c8495dc4f43a0 | p2@CU686889 |
| 5.14e-50 | FFCP PHASE1:Hg19::chr21:44592820..44592840,-#_7dc0b6ba3c7ab60d734c8495dc4f43a0 | p2@CU686889 |
| 6.6e-50 | FFCP PHASE2:Hg19::chr21:44589339..44589372,-#_2456163f6b01187978daefc432facf6c | p@chr21:44589339..44589372, - |
| 6.6e-50 | FFCP PHASE1:Hg19::chr12:132475501..132475504,+#_2456163f6b01187978daefc432facf6c | p@chr12:132475501..132475504, + |
| 6.6e-50 | FFCP PHASE1:Hg19::chr21:44592842..44592867,-#_2456163f6b01187978daefc432facf6c | p1@CU686889 |
| 6.6e-50 | FFCP PHASE1:Hg19::chr21:44589339..44589372,-#_2456163f6b01187978daefc432facf6c | p@chr21:44589339..44589372, - |
| 6.6e-50 | FFCP PHASE2:Hg19::chr21:44592842..44592867,-#_2456163f6b01187978daefc432facf6c | p1@CU686889 |
| 6.6e-50 | FFCP PHASE2:Hg19::chr12:132475501..132475504,+#_2456163f6b01187978daefc432facf6c | p@chr12:132475501..132475504, + |
| 6.27e-44 | FFCP PHASE2:Hg19::chr11:31827535..31827565,-#_963c5f4fb694c2766ac0c5b7e09076be | p11@PAX6 |
| 6.27e-44 | FFCP PHASE1:Hg19::chr11:31827535..31827565,-#_963c5f4fb694c2766ac0c5b7e09076be | p11@PAX6 |
| 1.92e-41 | FFCP PHASE1:Hg19::chr3:186262166..186262170,-#_a51f7378f7dd20e2f9fa6296da7b524b | p1@CRYGS |
| 1.92e-41 | FFCP PHASE2:Hg19::chr3:186262166..186262170,-#_a51f7378f7dd20e2f9fa6296da7b524b | p1@CRYGS |
| 4.94e-40 | FFCP PHASE2:Hg19::chr5:112173525..112173532,+#_af0d00502530f4631d4bfcfb8f9d78ee | p@chr5:112173525..112173532, + |
| 4.94e-40 | FFCP PHASE1:Hg19::chr5:112173525..112173532,+#_af0d00502530f4631d4bfcfb8f9d78ee | p@chr5:112173525..112173532, + |
| 1.62e-37 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_1d671919c8779e3efcd5f67ccb16c63c | p7@PTPRU |
| 1.62e-37 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_1d671919c8779e3efcd5f67ccb16c63c | p7@PTPRU |
| 2.1e-35 | FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_8ed164c8b70ea57163a0c78f061e2c99 | p3@SIX6 |
| 2.1e-35 | FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_8ed164c8b70ea57163a0c78f061e2c99 | p3@SIX6 |
| 6.73e-35 | FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_50e27168cba746cb23075f08939a294e | p4@SIX6 |
| 6.73e-35 | FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_50e27168cba746cb23075f08939a294e | p4@SIX6 |
| 5.06e-34 | FFCP PHASE2:Hg19::chr11:31667372..31667383,-#_c92b7421b6ed38a50d4b6dc2b26bbe8e | p@chr11:31667372..31667383, - |
| 5.06e-34 | FFCP PHASE1:Hg19::chr11:31667372..31667383,-#_c92b7421b6ed38a50d4b6dc2b26bbe8e | p@chr11:31667372..31667383, - |
| 8.36e-34 | FFCP PHASE1:Hg19::chr19:1470631..1470648,-#_2fcc79b2e9ca8154ee385a242e3cc2e5 | p@chr19:1470631..1470648, - |
| 8.36e-34 | FFCP PHASE2:Hg19::chr19:1470631..1470648,-#_2fcc79b2e9ca8154ee385a242e3cc2e5 | p@chr19:1470631..1470648, - |
| 5.55e-33 | FFCP PHASE1:Hg19::chr21:44589135..44589151,+#_6249b2b137aa96490e21135eb4d817cc | p1@CRYAA |
| 5.55e-33 | FFCP PHASE2:Hg19::chr21:44589135..44589151,+#_6249b2b137aa96490e21135eb4d817cc | p1@CRYAA |
| 9.55e-33 | FFCP PHASE1:Hg19::chr17:27573875..27573878,+#_3a21608e25cf2a4f4ddfd5539b1c4a22 | p1@CRYBA1 |
| 9.55e-33 | FFCP PHASE2:Hg19::chr17:27573875..27573878,+#_3a21608e25cf2a4f4ddfd5539b1c4a22 | p1@CRYBA1 |
| 2.74e-29 | FFCP PHASE2:Hg19::chr2:45168589..45168601,-#_3dd4c5215f609eea171a44e1369c6885 | p2@ENST00000456467 |
| 2.74e-29 | FFCP PHASE1:Hg19::chr2:45168589..45168601,-#_3dd4c5215f609eea171a44e1369c6885 | p2@ENST00000456467 |
| 3.65e-29 | FFCP PHASE2:Hg19::chr7:107883678..107883689,-#_ac2df97610e2795556a5e9bd4981b980 | p13@NRCAM |
| 3.65e-29 | FFCP PHASE1:Hg19::chr7:107883678..107883689,-#_ac2df97610e2795556a5e9bd4981b980 | p13@NRCAM |
| 7.46e-29 | FFCP PHASE2:Hg19::chr13:114202163..114202178,+#_ac2ce84949e73895a3a0cf34a0a37a54 | p@chr13:114202163..114202178, + |
| 7.46e-29 | FFCP PHASE1:Hg19::chr13:114202163..114202178,+#_ac2ce84949e73895a3a0cf34a0a37a54 | p@chr13:114202163..114202178, + |
| 1.36e-28 | FFCP PHASE1:Hg19::chr3:173116225..173116242,+#_95d7452e35b0ffe081cff7da7e13a466 | p10@NLGN1 |
| 1.36e-28 | FFCP PHASE2:Hg19::chr3:173116225..173116242,+#_95d7452e35b0ffe081cff7da7e13a466 | p10@NLGN1 |
| 2.64e-27 | FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_0f2bc71b4b7c43f3d6fc244504c5d295 | p10@SIX3 |
| 2.64e-27 | FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_0f2bc71b4b7c43f3d6fc244504c5d295 | p10@SIX3 |
| 8.39e-27 | FFCP PHASE2:Hg19::chr14:60975858..60975869,+#_0855810de08f775f4a3511b131a7b3ac | p2@SIX6 |
| 8.39e-27 | FFCP PHASE1:Hg19::chr14:60975858..60975869,+#_0855810de08f775f4a3511b131a7b3ac | p2@SIX6 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr1:147374915..147374932,+#_2898fb4781f15516b2d88b0ade52783f | p1@GJA8 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr3:150690809..150690822,-#_2898fb4781f15516b2d88b0ade52783f | p3@CLRN1 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr20:35861148..35861151,+#_2898fb4781f15516b2d88b0ade52783f | p@chr20:35861148..35861151, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chrX:43587410..43587413,+#_2898fb4781f15516b2d88b0ade52783f | p@chrX:43587410..43587413, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr19:40920692..40920700,-#_2898fb4781f15516b2d88b0ade52783f | p@chr19:40920692..40920700, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chr9:75848662..75848671,-#_2898fb4781f15516b2d88b0ade52783f | p@chr9:75848662..75848671, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chr19:40920692..40920700,-#_2898fb4781f15516b2d88b0ade52783f | p@chr19:40920692..40920700, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr20:35861148..35861151,+#_2898fb4781f15516b2d88b0ade52783f | p@chr20:35861148..35861151, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr3:150690809..150690822,-#_2898fb4781f15516b2d88b0ade52783f | p3@CLRN1 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr9:75848662..75848671,-#_2898fb4781f15516b2d88b0ade52783f | p@chr9:75848662..75848671, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chrX:43587410..43587413,+#_2898fb4781f15516b2d88b0ade52783f | p@chrX:43587410..43587413, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr1:147374915..147374932,+#_2898fb4781f15516b2d88b0ade52783f | p1@GJA8 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_926d52a6a69bbb21e5552b130ab23a26 | p30@PDP1 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr19:17137781..17137792,-#_926d52a6a69bbb21e5552b130ab23a26 | p6@CPAMD8 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr9:100057272..100057276,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr9:100057272..100057276, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr5:464155..464205,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr5:464155..464205, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr4:140656282..140656285,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr4:140656282..140656285, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr1:115873480..115873484,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr1:115873480..115873484, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr21:44592512..44592521,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr21:44592512..44592521, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr21:44592750..44592758,-#_926d52a6a69bbb21e5552b130ab23a26 | p4@CU686889 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr21:36253916..36253918,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr21:36253916..36253918, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr1:45769711..45769721,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr1:45769711..45769721, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr13:72440726..72440736,-#_926d52a6a69bbb21e5552b130ab23a26 | p19@DACH1 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr13:72440726..72440736,-#_926d52a6a69bbb21e5552b130ab23a26 | p19@DACH1 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr20:33903184..33903189,-#_926d52a6a69bbb21e5552b130ab23a26 | p11@UQCC |
| 7.14e-26 | FFCP PHASE2:Hg19::chr21:44592358..44592365,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr21:44592358..44592365, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr10:73406056..73406065,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr10:73406056..73406065, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr2:45154282..45154288,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr2:45154282..45154288, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr3:156322310..156322314,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr3:156322310..156322314, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr9:100057272..100057276,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr9:100057272..100057276, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr7:123198284..123198329,-#_926d52a6a69bbb21e5552b130ab23a26 | p3@NDUFA5 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr21:44592626..44592635,-#_926d52a6a69bbb21e5552b130ab23a26 | p5@CU686889 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr21:44592788..44592807,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr21:44592788..44592807, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr1:86064794..86064797,+#_926d52a6a69bbb21e5552b130ab23a26 | p1@ENST00000426794 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr16:17563573..17563582,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr16:17563573..17563582, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr1:115873480..115873484,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr1:115873480..115873484, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr5:45038620..45038622,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr5:45038620..45038622, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr5:124468141..124468176,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr5:124468141..124468176, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr10:73406056..73406065,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr10:73406056..73406065, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr2:693025..693036,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr2:693025..693036, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr16:85617064..85617073,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr16:85617064..85617073, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr2:10538258..10538282,+#_926d52a6a69bbb21e5552b130ab23a26 | p@chr2:10538258..10538282, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr2:45154282..45154288,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr2:45154282..45154288, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr21:44592750..44592758,-#_926d52a6a69bbb21e5552b130ab23a26 | p4@CU686889 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr4:140656282..140656285,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr4:140656282..140656285, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr1:45769711..45769721,-#_926d52a6a69bbb21e5552b130ab23a26 | p@chr1:45769711..45769721, - |
