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{{UBERON
{{UBERON
|id=UBERON:0001694
|alt_id=UBERON:FMA_52871-MA_0001477
|name=petrous part of temporal bone
|namespace=
|def="The temporal bones are situated at the sides and base of the skull. The temporal bone supports that part of the face known as the temple. [WP,unvetted]." [Wikipedia:Petrous_bone]
|xref=EHDAA2:0001452;;EMAPA:17683;;FMA:52871;;GAID:234;;http://upload.wikimedia.org/wikipedia/commons/thumb/9/96/Gray137.png/200px-Gray137.png;;MA:0001477;;MESH:A.02.835.232.781.885.681;;SCTID:361733004
|is_a=UBERON:0000064;;UBERON:0004120
|synonym="pars petrosa (os temporale)" EXACT [];;"petromastoid part of temporal bone" EXACT [];;"petrosal bone" EXACT [];;"petrous bone" EXACT [];;"temporal bone petrous part" EXACT []
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_52871-MA_0001477
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The temporal bones are situated at the sides and base of the skull. The temporal bone supports that part of the face known as the temple. [WP,unvetted]." [Wikipedia:Petrous_bone]
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001694
|is_a=UBERON:0004120 ;;UBERON:0005913 ;;UBERON:0010313
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0001678
|name=petrous part of temporal bone
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001678;;UBERON:0002517
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=uberon_slim
|synonym="pars petrosa (os temporale)" EXACT [FMA:52871];;"pars petrosa ossis temporalis" EXACT [];;"petromastoid part of temporal bone" EXACT [FMA:52871];;"petrosal bone" EXACT [FMA:52871];;"petrous bone" EXACT [FMA:52871];;"temporal bone petrous part" EXACT []
|union_of=
|xref=EHDAA2:0001452;;EMAPA:17683;;FMA:52871;;GAID:234;;http://upload.wikimedia.org/wikipedia/commons/thumb/9/96/Gray137.png/200px-Gray137.png;;MA:0001477;;MESH:A.02.835.232.781.885.681;;ncithesaurus:Ciliary_Process;;SCTID:361733004
}}
}}

Latest revision as of 17:19, 12 September 2014

Name:petrous part of temporal bone
Namespace:FANTOM
Definition:"The temporal bones are situated at the sides and base of the skull. The temporal bone supports that part of the face known as the temple. [WP,unvetted]." [Wikipedia:Petrous_bone]
Xrefs:
links:

EHDAA2:0001452
EMAPA:17683
FMA:52871
GAID:234
[ 200px-Gray137.png 200px-Gray137.png]
MA:0001477
MESH:A.02.835.232.781.885.681
ncithesaurus:Ciliary_Process

SCTID:361733004
Synonyms: "pars petrosa (os temporale)" EXACT [FMA:52871]
"pars petrosa ossis temporalis" EXACT []
"petromastoid part of temporal bone" EXACT [FMA:52871]
"petrosal bone" EXACT [FMA:52871]
"petrous bone" EXACT [FMA:52871]
"temporal bone petrous part" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_52871-MA_0001477
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0005913(zone of bone organ),UBERON:0010313(neural crest-derived structure)
part_of:UBERON:0001678(temporal bone),UBERON:0002517(basicranium)



Children

part of:UBERON:0001839 (bony labyrinth),UBERON:0004637 (otic capsule)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001694 (petrous part of temporal bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:41495920..41495928, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p9@Otof
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_656ecb1cd01b0507b1ed7014a1c9b8c5p2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_656ecb1cd01b0507b1ed7014a1c9b8c5p@chr11:4689776..4689785, -

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