UBERON:0001678: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 10: | Line 10: | ||
|has_quality= | |has_quality= | ||
|id=UBERON:0001678 | |id=UBERON:0001678 | ||
|is_a=UBERON: | |is_a=UBERON:0003462 ;;UBERON:0008193 ;;UBERON:0015212 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=temporal bone | |name=temporal bone | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004339 | |part_of=UBERON:0004339 | ||
Latest revision as of 17:19, 12 September 2014
| Name: | temporal bone | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The temporal bones are situated at the sides and base of the skull, and lateral to the temporal lobes of the cerebrum." [Wikipedia:Temporal_bone] | ||
| Xrefs: |
| ||
| Synonyms: | "os temporale" RELATED LATIN [Wikipedia:Temporal_bone] | ||
| Comments: | The temporal bone consists of four parts: * Squama temporalis * Mastoid portion * Petrous portion (Petrosal ridge) * Tympanic part[WP]. AO notes: Note the Temporal bone is not explicitly categorized to a part of the cranium in FMA. Taxon notes: fusion of squamosal + angular (tympanic annulus) [derm] + petrosal (prootic + opisthotic)[chond] + styloid process[splanc.] | ||
| Alt_id: | UBERON:FMA_52737-MA_0001476 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003462(facial bone),UBERON:0008193(pneumatized bone),UBERON:0015212(lateral structure) |
|---|---|
| part_of: | UBERON:0004339(calvarium) |
Children
| part of: | UBERON:0001694 (petrous part of temporal bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001678 (temporal bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:31585340..31585360, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_329b6ed7138a6c61a2ec9877f02c3792 | p9@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:63099970..63099980, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Tectb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Fanca |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_329b6ed7138a6c61a2ec9877f02c3792 | p3@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Dytn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr4:154208086..154208123, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Tomt |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Dytn |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_329b6ed7138a6c61a2ec9877f02c3792 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_329b6ed7138a6c61a2ec9877f02c3792 | p4@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chrX:154140800..154140810, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:172843885..172843890, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_329b6ed7138a6c61a2ec9877f02c3792 | p7@A730017C20Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:43454162..43454170, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_329b6ed7138a6c61a2ec9877f02c3792 | p5@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr14:47293487..47293493, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_329b6ed7138a6c61a2ec9877f02c3792 | p4@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_329b6ed7138a6c61a2ec9877f02c3792 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_329b6ed7138a6c61a2ec9877f02c3792 | p10@Sec11a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_329b6ed7138a6c61a2ec9877f02c3792 | p4@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_329b6ed7138a6c61a2ec9877f02c3792 | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_329b6ed7138a6c61a2ec9877f02c3792 | p4@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr2:53464178..53464186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_329b6ed7138a6c61a2ec9877f02c3792 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_329b6ed7138a6c61a2ec9877f02c3792 | p21@Espn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_329b6ed7138a6c61a2ec9877f02c3792 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_329b6ed7138a6c61a2ec9877f02c3792 | p@chr3:58626291..58626298, - |
