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{{UBERON
{{UBERON
|id=UBERON:0000989
|alt_id=UBERON:FBbt_00004852-FMA_9707-MA_0000408-MIAA_0000186
|name=penis
|anatomical_img_id=FMA:9707
|namespace=
|def="The penis (plural penises, penes) is an external sexual organ of certain biologically male organisms, in both vertebrates and invertebrates. The penis is a reproductive organ, technically an intromittent organ, and for placental mammals, additionally serves as the external organ of urination. The penis is generally found on mammals and reptiles. [WP,unvetted]." [Wikipedia:Penis]
|xref=BTO:0000405;;EFO:0000987;;EHDAA2:0001433;;EHDAA:9380;;EMAPA:18682;;EMAPA:18996;;EV:0100107;;FMA:9707;;GAID:389;;galen:Penis;;http://upload.wikimedia.org/wikipedia/commons/thumb/8/87/Labelled_flaccid_penis.jpg/200px-Labelled_flaccid_penis.jpg;;MA:0000408;;MAT:0000186;;MESH:A.05.360.444.492;;MIAA:0000186;;ncithesaurus:Penis;;OpenCyc:Mx4rvVjkCZwpEbGdrcN5Y29ycA;;SCTID:265793009;;VHOG:0000727
|is_a=UBERON:0008811
|synonym="phallus" RELATED []
|comment=Most male birds (e.g., roosters and turkeys) have a cloaca (also present on the female), but not a penis. Among bird species with a penis are paleognathes (tinamous and ratites), Anatidae (ducks, geese and swans), and a very few other species (such as flamingoes). A bird penis is different in structure from mammal penises, being an erectile expansion of the cloacal wall and being erected by lymph, not blood. It is usually partially feathered and in some species features spines and brush-like filaments, and in flaccid state curls up inside the cloaca[WP]
|comment=Most male birds (e.g., roosters and turkeys) have a cloaca (also present on the female), but not a penis. Among bird species with a penis are paleognathes (tinamous and ratites), Anatidae (ducks, geese and swans), and a very few other species (such as flamingoes). A bird penis is different in structure from mammal penises, being an erectile expansion of the cloacal wall and being erected by lymph, not blood. It is usually partially feathered and in some species features spines and brush-like filaments, and in flaccid state curls up inside the cloaca[WP]
|alt_id=UBERON:FBbt_00004852-FMA_9707-MA_0000408-MIAA_0000186
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The penis (plural penises, penes) is an external sexual organ of certain biologically male organisms, in both vertebrates and invertebrates. The penis is a reproductive organ, technically an intromittent organ, and for placental mammals, additionally serves as the external organ of urination. The penis is generally found on mammals and reptiles. [WP,unvetted]." [Wikipedia:Penis]
|subset=organ_slim;;uberon_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=UBERON:0004876;;UBERON:0005876
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0000989
|is_a=UBERON:0008811
|is_obsolete=
|located_in=
|located_in=
|name=penis
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim;;uberon_slim
|preceded_by=
|synonym="phallus" RELATED []
|union_of=
|xref=BTO:0000405;;EFO:0000987;;EHDAA2:0001433;;EHDAA:9380;;EMAPA:18682;;EMAPA:18996;;EV:0100107;;FMA:9707;;GAID:389;;galen:Penis;;http://upload.wikimedia.org/wikipedia/commons/thumb/8/87/Labelled_flaccid_penis.jpg/200px-Labelled_flaccid_penis.jpg;;MA:0000408;;MAT:0000186;;MESH:A.05.360.444.492;;MIAA:0000186;;ncithesaurus:Penis;;OpenCyc:Mx4rvVjkCZwpEbGdrcN5Y29ycA;;SCTID:265793009;;VHOG:0000727
}}
}}

Latest revision as of 17:13, 12 September 2014

Name:penis
Namespace:FANTOM
Definition:"The penis (plural penises, penes) is an external sexual organ of certain biologically male organisms, in both vertebrates and invertebrates. The penis is a reproductive organ, technically an intromittent organ, and for placental mammals, additionally serves as the external organ of urination. The penis is generally found on mammals and reptiles. [WP,unvetted]." [Wikipedia:Penis]
Xrefs:
links:

BTO:0000405
EFO:0000987
EHDAA2:0001433
EHDAA:9380
EMAPA:18682
EMAPA:18996
EV:0100107
FMA:9707
GAID:389
galen:Penis
[1]
MA:0000408
MAT:0000186
MESH:A.05.360.444.492
MIAA:0000186
ncithesaurus:Penis
OpenCyc:Mx4rvVjkCZwpEbGdrcN5Y29ycA
SCTID:265793009

VHOG:0000727
Synonyms: "phallus" RELATED []
Comments:Most male birds (e.g., roosters and turkeys) have a cloaca (also present on the female), but not a penis. Among bird species with a penis are paleognathes (tinamous and ratites), Anatidae (ducks, geese and swans), and a very few other species (such as flamingoes). A bird penis is different in structure from mammal penises, being an erectile expansion of the cloacal wall and being erected by lymph, not blood. It is usually partially feathered and in some species features spines and brush-like filaments, and in flaccid state curls up inside the cloaca[WP]
Alt_id: UBERON:FBbt_00004852-FMA_9707-MA_0000408-MIAA_0000186
Subset: organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0008811(intromittent organ)
develops_from:UBERON:0004876(urogenital ridge),UBERON:0005876(undifferentiated genital tubercle)



Children

derives from:FF:0010200 (human penis - adult sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000989 (penis), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.37e-99FFCP PHASE2:Hg19::chr12:53068923..53068932,-#_245f51eacf54dd0c872f97d8161d5dbap@chr12:53068923..53068932, -
9.37e-99FFCP PHASE1:Hg19::chr12:53068889..53068898,-#_245f51eacf54dd0c872f97d8161d5dbap@chr12:53068889..53068898, -
9.37e-99FFCP PHASE1:Hg19::chr12:53068923..53068932,-#_245f51eacf54dd0c872f97d8161d5dbap@chr12:53068923..53068932, -
9.37e-99FFCP PHASE2:Hg19::chr12:53068889..53068898,-#_245f51eacf54dd0c872f97d8161d5dbap@chr12:53068889..53068898, -
2.55e-98FFCP PHASE1:Hg19::chr15:45803320..45803343,+#_c85985b2038521e6f676340a62a303e1p1@HMGN2P46
2.55e-98FFCP PHASE1:Hg19::chr16:15811123..15811133,+#_c85985b2038521e6f676340a62a303e1p@chr16:15811123..15811133, +
2.55e-98FFCP PHASE2:Hg19::chr5:59672718..59672753,-#_c85985b2038521e6f676340a62a303e1p@chr5:59672718..59672753, -
2.55e-98FFCP PHASE2:Hg19::chr8:72252453..72252458,-#_c85985b2038521e6f676340a62a303e1p@chr8:72252453..72252458, -
2.55e-98FFCP PHASE1:Hg19::chr9:79379348..79379360,+#_c85985b2038521e6f676340a62a303e1p1@PCA3
2.55e-98FFCP PHASE2:Hg19::chr17:38976407..38976413,-#_c85985b2038521e6f676340a62a303e1p20@KRT10
2.55e-98FFCP PHASE2:Hg19::chr6:110964453..110964459,-#_c85985b2038521e6f676340a62a303e1p16@CDK19
2.55e-98FFCP PHASE1:Hg19::chr5:59672718..59672753,-#_c85985b2038521e6f676340a62a303e1p@chr5:59672718..59672753, -
2.55e-98FFCP PHASE2:Hg19::chr17:38975820..38975830,-#_c85985b2038521e6f676340a62a303e1p10@KRT10
2.55e-98FFCP PHASE1:Hg19::chr8:72252453..72252458,-#_c85985b2038521e6f676340a62a303e1p@chr8:72252453..72252458, -
2.55e-98FFCP PHASE1:Hg19::chr17:38976407..38976413,-#_c85985b2038521e6f676340a62a303e1p20@KRT10
2.55e-98FFCP PHASE2:Hg19::chr15:45803320..45803343,+#_c85985b2038521e6f676340a62a303e1p1@HMGN2P46
2.55e-98FFCP PHASE1:Hg19::chr17:38975820..38975830,-#_c85985b2038521e6f676340a62a303e1p10@KRT10
2.55e-98FFCP PHASE2:Hg19::chr16:15811123..15811133,+#_c85985b2038521e6f676340a62a303e1p@chr16:15811123..15811133, +
2.55e-98FFCP PHASE1:Hg19::chr6:110964453..110964459,-#_c85985b2038521e6f676340a62a303e1p16@CDK19
2.55e-98FFCP PHASE2:Hg19::chr9:79379348..79379360,+#_c85985b2038521e6f676340a62a303e1p1@PCA3
1.23e-66FFCP PHASE2:Hg19::chr12:53068552..53068579,-#_d8c156760ffc55badefb381213584582p@chr12:53068552..53068579, -
1.23e-66FFCP PHASE2:Hg19::chr14:74454889..74454892,-#_d8c156760ffc55badefb381213584582p10@ENTPD5
1.23e-66FFCP PHASE1:Hg19::chr12:53068552..53068579,-#_d8c156760ffc55badefb381213584582p@chr12:53068552..53068579, -
1.23e-66FFCP PHASE1:Hg19::chr14:74454889..74454892,-#_d8c156760ffc55badefb381213584582p10@ENTPD5
2.39e-66FFCP PHASE1:Hg19::chr17:38975850..38975854,-#_560c896c8007548dd1cddfa6d09fb60ap19@KRT10
2.39e-66FFCP PHASE2:Hg19::chr1:61416169..61416181,-#_560c896c8007548dd1cddfa6d09fb60ap@chr1:61416169..61416181, -
2.39e-66FFCP PHASE1:Hg19::chr1:61416169..61416181,-#_560c896c8007548dd1cddfa6d09fb60ap@chr1:61416169..61416181, -
2.39e-66FFCP PHASE1:Hg19::chr17:38978526..38978535,+#_560c896c8007548dd1cddfa6d09fb60ap@chr17:38978526..38978535, +
2.39e-66FFCP PHASE1:Hg19::chr19:51517928..51517936,-#_560c896c8007548dd1cddfa6d09fb60ap2@AK026045
2.39e-66FFCP PHASE2:Hg19::chr19:51517928..51517936,-#_560c896c8007548dd1cddfa6d09fb60ap2@AK026045
2.39e-66FFCP PHASE2:Hg19::chr17:33640639..33640650,+#_560c896c8007548dd1cddfa6d09fb60ap@chr17:33640639..33640650, +
2.39e-66FFCP PHASE2:Hg19::chr4:186434325..186434339,-#_560c896c8007548dd1cddfa6d09fb60ap@chr4:186434325..186434339, -
2.39e-66FFCP PHASE1:Hg19::chr1:209545365..209545377,+#_560c896c8007548dd1cddfa6d09fb60ap1@ENST00000447257
2.39e-66FFCP PHASE2:Hg19::chr6:152585338..152585342,-#_560c896c8007548dd1cddfa6d09fb60ap@chr6:152585338..152585342, -
2.39e-66FFCP PHASE2:Hg19::chr1:209545365..209545377,+#_560c896c8007548dd1cddfa6d09fb60ap1@ENST00000447257
2.39e-66FFCP PHASE1:Hg19::chr17:33640639..33640650,+#_560c896c8007548dd1cddfa6d09fb60ap@chr17:33640639..33640650, +
2.39e-66FFCP PHASE2:Hg19::chr19:38664309..38664322,+#_560c896c8007548dd1cddfa6d09fb60ap@chr19:38664309..38664322, +
2.39e-66FFCP PHASE2:Hg19::chr2:179399981..179399988,-#_560c896c8007548dd1cddfa6d09fb60ap@chr2:179399981..179399988, -
2.39e-66FFCP PHASE2:Hg19::chr17:38975796..38975805,-#_560c896c8007548dd1cddfa6d09fb60ap13@KRT10
2.39e-66FFCP PHASE1:Hg19::chr19:38664309..38664322,+#_560c896c8007548dd1cddfa6d09fb60ap@chr19:38664309..38664322, +
2.39e-66FFCP PHASE1:Hg19::chr4:186434325..186434339,-#_560c896c8007548dd1cddfa6d09fb60ap@chr4:186434325..186434339, -
2.39e-66FFCP PHASE1:Hg19::chr2:179399981..179399988,-#_560c896c8007548dd1cddfa6d09fb60ap@chr2:179399981..179399988, -
2.39e-66FFCP PHASE2:Hg19::chr2:179393635..179393640,-#_560c896c8007548dd1cddfa6d09fb60ap167@TTN
2.39e-66FFCP PHASE1:Hg19::chr17:38975796..38975805,-#_560c896c8007548dd1cddfa6d09fb60ap13@KRT10
2.39e-66FFCP PHASE2:Hg19::chr17:38976909..38976919,-#_560c896c8007548dd1cddfa6d09fb60ap@chr17:38976909..38976919, -
2.39e-66FFCP PHASE1:Hg19::chr2:179393635..179393640,-#_560c896c8007548dd1cddfa6d09fb60ap167@TTN
2.39e-66FFCP PHASE1:Hg19::chr17:38976909..38976919,-#_560c896c8007548dd1cddfa6d09fb60ap@chr17:38976909..38976919, -
2.39e-66FFCP PHASE1:Hg19::chr6:152585338..152585342,-#_560c896c8007548dd1cddfa6d09fb60ap@chr6:152585338..152585342, -
2.39e-66FFCP PHASE2:Hg19::chr17:38975850..38975854,-#_560c896c8007548dd1cddfa6d09fb60ap19@KRT10
2.39e-66FFCP PHASE2:Hg19::chr17:38978526..38978535,+#_560c896c8007548dd1cddfa6d09fb60ap@chr17:38978526..38978535, +
4.66e-66FFCP PHASE1:Hg19::chr2:179542558..179542568,-#_9edc11f0870f445373633884f7b0798ap@chr2:179542558..179542568, -
4.66e-66FFCP PHASE1:Hg19::chr13:103555720..103555725,+#_9edc11f0870f445373633884f7b0798ap@chr13:103555720..103555725, +
4.66e-66FFCP PHASE1:Hg19::chr5:66771311..66771320,-#_9edc11f0870f445373633884f7b0798ap2@ENST00000508512
4.66e-66FFCP PHASE2:Hg19::chr10:94301107..94301111,-#_9edc11f0870f445373633884f7b0798ap18@IDE
4.66e-66FFCP PHASE2:Hg19::chr2:152520302..152520308,-#_9edc11f0870f445373633884f7b0798ap@chr2:152520302..152520308, -
4.66e-66FFCP PHASE1:Hg19::chr2:152520302..152520308,-#_9edc11f0870f445373633884f7b0798ap@chr2:152520302..152520308, -
4.66e-66FFCP PHASE1:Hg19::chr16:34571309..34571314,-#_9edc11f0870f445373633884f7b0798ap@chr16:34571309..34571314, -
4.66e-66FFCP PHASE2:Hg19::chr2:152520333..152520340,-#_9edc11f0870f445373633884f7b0798ap@chr2:152520333..152520340, -
4.66e-66FFCP PHASE2:Hg19::chr2:152548420..152548425,-#_9edc11f0870f445373633884f7b0798ap@chr2:152548420..152548425, -
4.66e-66FFCP PHASE1:Hg19::chr10:94301107..94301111,-#_9edc11f0870f445373633884f7b0798ap18@IDE
4.66e-66FFCP PHASE2:Hg19::chr2:75869014..75869047,+#_9edc11f0870f445373633884f7b0798ap@chr2:75869014..75869047, +
4.66e-66FFCP PHASE2:Hg19::chr3:52875783..52875812,-#_9edc11f0870f445373633884f7b0798ap7@TMEM110
4.66e-66FFCP PHASE1:Hg19::chr2:152520333..152520340,-#_9edc11f0870f445373633884f7b0798ap@chr2:152520333..152520340, -
4.66e-66FFCP PHASE1:Hg19::chr2:152548420..152548425,-#_9edc11f0870f445373633884f7b0798ap@chr2:152548420..152548425, -
4.66e-66FFCP PHASE1:Hg19::chr2:75869014..75869047,+#_9edc11f0870f445373633884f7b0798ap@chr2:75869014..75869047, +
4.66e-66FFCP PHASE2:Hg19::chr16:34571309..34571314,-#_9edc11f0870f445373633884f7b0798ap@chr16:34571309..34571314, -
4.66e-66FFCP PHASE1:Hg19::chr3:52875783..52875812,-#_9edc11f0870f445373633884f7b0798ap7@TMEM110
4.66e-66FFCP PHASE2:Hg19::chr5:66771311..66771320,-#_9edc11f0870f445373633884f7b0798ap2@ENST00000508512
4.66e-66FFCP PHASE2:Hg19::chr13:103555720..103555725,+#_9edc11f0870f445373633884f7b0798ap@chr13:103555720..103555725, +
4.66e-66FFCP PHASE2:Hg19::chr2:179542558..179542568,-#_9edc11f0870f445373633884f7b0798ap@chr2:179542558..179542568, -
1.46e-50FFCP PHASE2:Hg19::chr17:4448859..4448864,-#_ae7c17fa4dd9011b9567fadba5e5e1e9p@chr17:4448859..4448864, -
1.46e-50FFCP PHASE1:Hg19::chr17:4448859..4448864,-#_ae7c17fa4dd9011b9567fadba5e5e1e9p@chr17:4448859..4448864, -
1.46e-50FFCP PHASE2:Hg19::chr2:178753478..178753487,-#_ae7c17fa4dd9011b9567fadba5e5e1e9p10@PDE11A
1.46e-50FFCP PHASE1:Hg19::chr2:178753478..178753487,-#_ae7c17fa4dd9011b9567fadba5e5e1e9p10@PDE11A
2.42e-50FFCP PHASE2:Hg19::chr10:15646574..15646578,-#_1e444064ff4e0e7e4d645331676ba012p11@ITGA8
2.42e-50FFCP PHASE2:Hg19::chr2:152554090..152554096,-#_1e444064ff4e0e7e4d645331676ba012p@chr2:152554090..152554096, -
2.42e-50FFCP PHASE1:Hg19::chr2:152554090..152554096,-#_1e444064ff4e0e7e4d645331676ba012p@chr2:152554090..152554096, -
2.42e-50FFCP PHASE2:Hg19::chr10:71351909..71351911,+#_1e444064ff4e0e7e4d645331676ba012p@chr10:71351909..71351911, +
2.42e-50FFCP PHASE1:Hg19::chr16:56598984..56598990,+#_1e444064ff4e0e7e4d645331676ba012p1@MT4
2.42e-50FFCP PHASE1:Hg19::chr10:15646574..15646578,-#_1e444064ff4e0e7e4d645331676ba012p11@ITGA8
2.42e-50FFCP PHASE2:Hg19::chr17:10421962..10421969,-#_1e444064ff4e0e7e4d645331676ba012p2@MYH1
2.42e-50FFCP PHASE1:Hg19::chr17:10421962..10421969,-#_1e444064ff4e0e7e4d645331676ba012p2@MYH1
2.42e-50FFCP PHASE2:Hg19::chr2:170783857..170783860,+#_1e444064ff4e0e7e4d645331676ba012p@chr2:170783857..170783860, +
2.42e-50FFCP PHASE1:Hg19::chr2:170783857..170783860,+#_1e444064ff4e0e7e4d645331676ba012p@chr2:170783857..170783860, +
2.42e-50FFCP PHASE2:Hg19::chr16:56598984..56598990,+#_1e444064ff4e0e7e4d645331676ba012p1@MT4
2.42e-50FFCP PHASE2:Hg19::chr20:33451327..33451358,-#_1e444064ff4e0e7e4d645331676ba012p4@GGT7
2.42e-50FFCP PHASE1:Hg19::chr20:33451327..33451358,-#_1e444064ff4e0e7e4d645331676ba012p4@GGT7
2.42e-50FFCP PHASE1:Hg19::chr10:71351909..71351911,+#_1e444064ff4e0e7e4d645331676ba012p@chr10:71351909..71351911, +
3.99e-50FFCP PHASE2:Hg19::chr5:66771335..66771342,-#_1b1b896ed5e213c9f44ba13d1877995bp3@ENST00000508512
3.99e-50FFCP PHASE1:Hg19::chr2:152409955..152409964,-#_1b1b896ed5e213c9f44ba13d1877995bp@chr2:152409955..152409964, -
3.99e-50FFCP PHASE1:Hg19::chr1:152483278..152483280,+#_1b1b896ed5e213c9f44ba13d1877995bp1@LCE5A
3.99e-50FFCP PHASE1:Hg19::chr16:15865517..15865522,-#_1b1b896ed5e213c9f44ba13d1877995bp@chr16:15865517..15865522, -
3.99e-50FFCP PHASE2:Hg19::chr2:179399074..179399079,-#_1b1b896ed5e213c9f44ba13d1877995bp@chr2:179399074..179399079, -
3.99e-50FFCP PHASE1:Hg19::chr12:10856739..10856746,-#_1b1b896ed5e213c9f44ba13d1877995bp36@CSDA
3.99e-50FFCP PHASE2:Hg19::chr5:38484957..38484965,-#_1b1b896ed5e213c9f44ba13d1877995bp@chr5:38484957..38484965, -
3.99e-50FFCP PHASE2:Hg19::chr6:2744431..2744440,-#_1b1b896ed5e213c9f44ba13d1877995bp@chr6:2744431..2744440, -
3.99e-50FFCP PHASE2:Hg19::chr6:56362490..56362515,-#_1b1b896ed5e213c9f44ba13d1877995bp60@DST
3.99e-50FFCP PHASE1:Hg19::chr2:179399074..179399079,-#_1b1b896ed5e213c9f44ba13d1877995bp@chr2:179399074..179399079, -
3.99e-50FFCP PHASE1:Hg19::chr5:66771335..66771342,-#_1b1b896ed5e213c9f44ba13d1877995bp3@ENST00000508512
3.99e-50FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_1b1b896ed5e213c9f44ba13d1877995bp@chr17:38976882..38976895, -

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