UBERON:0000947: Difference between revisions
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|has_quality= | |has_quality= | ||
|id=UBERON:0000947 | |id=UBERON:0000947 | ||
|is_a=UBERON: | |is_a=UBERON:0003509 ;;UBERON:0013768 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=aorta | |name=aorta | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of=UBERON:0010191 | ||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The main artery of the circulatory system which carries oxygenated blood from the heart to all the arteries of the body except those of the lungs.[AAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The main artery of the circulatory system which carries oxygenated blood from the heart to all the arteries of the body except those of the lungs.[AAO]" xsd:string | ||
Latest revision as of 17:11, 12 September 2014
| Name: | aorta | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Artery carrying blood from the heart to all the organs and other structures of the body, bringing oxygenated blood to all parts of the body in the systemic circulation" [Wikipedia:Aorta] | ||
| Xrefs: |
| ||
| Synonyms: |
"aorta, arteria maxima" RELATED LATIN [Wikipedia:Aorta] "dorsal aorta" NARROW SENSU [Wikipedia:Aorta#In_other_animals, ZFA:0000014] "trunk of aortic tree" EXACT [] "trunk of systemic arterial tree" EXACT [] | ||
| Comments: | Editor notes: This class is currently a mixed bag, encompassing (1) the entirety of the mammalian aorta together with (2) the developmental and phylogenetic homologs of its segments: the ventral aorta and dorsal aortae. Taxon notes: All amniotes have a broadly similar arrangement to that of humans, albeit with a number of individual variations. In fish, however, there are two separate vessels referred to as aortas. The ventral aorta carries de-oxygenated blood from the heart to the gills; part of this vessel forms the ascending aorta in tetrapods (the remainder forms the pulmonary artery). A second, dorsal aorta carries oxygenated blood from the gills to the rest of the body, and is homologous with the descending aorta of tetrapods. The two aortas are connected by a number of vessels, one passing through each of the gills. Amphibians also retain the fifth connecting vessel, so that the aorta has two parallel arches[WP]. | ||
| Alt_id: | UBERON:FBbt_00003153-FMA_3734-MA_0000062-MA_0000476-MIAA_0000035-XAO_0003010-ZFA_0000014 | ||
| Subset: |
grouping_class uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003509(arterial blood vessel),UBERON:0013768(great vessel of heart) |
|---|---|
| part_of: | UBERON:0010191(aortic system) |
Children
| is a: | UBERON:0005622 (right dorsal aorta),UBERON:0005805 (dorsal aorta) |
|---|---|
| derives from: | FF:0010052 (human aorta - adult sample),FF:0011359 (mouse aorta - adult sample) |
| part of: | FF:0000048 (human endothelial cell of the aorta sample),UBERON:0004178 (aorta smooth muscle tissue),UBERON:0004663 (aorta wall),UBERON:0004664 (aorta tunica adventitia),UBERON:0005800 (segment of aorta) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10052-101G7 (aorta, adult, pool1)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
... further results Mouse (Mus musculus)
- 10052-101G7 (aorta, adult, pool1)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000947 (aorta), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.46e-86 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_bb64e6fdc0b92465c3a26e4641fdd0fd | p6@Npy1r |
| 1.46e-86 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_bb64e6fdc0b92465c3a26e4641fdd0fd | p6@Npy1r |
| 7.36e-70 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_6ea097560eba375f37843fc7eb5e6527 | p5@Npy1r |
| 7.36e-70 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_6ea097560eba375f37843fc7eb5e6527 | p5@Npy1r |
| 2.47e-69 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_dd4d17dce92f88f3916da48972dc8813 | p@chr2:65009852..65009866, - |
| 2.47e-69 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_dd4d17dce92f88f3916da48972dc8813 | p@chr2:65009852..65009866, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_5281b1accede4523b860248e387dbdbd | p@chr17:87574327..87574332, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_5281b1accede4523b860248e387dbdbd | p@chr2:112043522..112043530, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_5281b1accede4523b860248e387dbdbd | p@chr17:87574327..87574332, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_5281b1accede4523b860248e387dbdbd | p@chrX:160839744..160839754, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_5281b1accede4523b860248e387dbdbd | p@chr2:178190171..178190178, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_5281b1accede4523b860248e387dbdbd | p@chr17:14827154..14827169, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_5281b1accede4523b860248e387dbdbd | p5@Adamts2 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_5281b1accede4523b860248e387dbdbd | p@chr17:14802633..14802637, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_5281b1accede4523b860248e387dbdbd | p@chr17:14827154..14827169, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_5281b1accede4523b860248e387dbdbd | p@chr2:178190171..178190178, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_5281b1accede4523b860248e387dbdbd | p5@Adamts2 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_5281b1accede4523b860248e387dbdbd | p@chr8:69228447..69228492, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_5281b1accede4523b860248e387dbdbd | p@chr17:14802633..14802637, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_5281b1accede4523b860248e387dbdbd | p@chrX:160839744..160839754, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_5281b1accede4523b860248e387dbdbd | p@chr8:69228447..69228492, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_5281b1accede4523b860248e387dbdbd | p@chr2:112043522..112043530, - |
| 9.34e-51 | FFCP PHASE2:Mm9::chr17:75578018..75578028,+#_64805ccb88d2a4ee649a4f559ba6691f | p14@Ltbp1 |
| 9.34e-51 | FFCP PHASE1:Mm9::chr17:75578018..75578028,+#_64805ccb88d2a4ee649a4f559ba6691f | p14@Ltbp1 |
| 1.67e-50 | FFCP PHASE1:Mm9::chr10:67598016..67598032,-#_0740394207fb3f7479c4e2fb984b82e8 | p@chr10:67598016..67598032, - |
| 1.67e-50 | FFCP PHASE2:Mm9::chr10:67598016..67598032,-#_0740394207fb3f7479c4e2fb984b82e8 | p@chr10:67598016..67598032, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_0cd4ab26f51fed1f415606a01f699c50 | p@chr11:118164535..118164544, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_0cd4ab26f51fed1f415606a01f699c50 | p@chrX:160840025..160840037, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_0cd4ab26f51fed1f415606a01f699c50 | p@chrX:160840048..160840057, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_0cd4ab26f51fed1f415606a01f699c50 | p@chr6:128920492..128920498, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_0cd4ab26f51fed1f415606a01f699c50 | p@chr11:118164535..118164544, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_0cd4ab26f51fed1f415606a01f699c50 | p@chrX:160840025..160840037, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_0cd4ab26f51fed1f415606a01f699c50 | p5@Myl12b |
| 1.6e-49 | FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_0cd4ab26f51fed1f415606a01f699c50 | p5@Myl12b |
| 1.6e-49 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_0cd4ab26f51fed1f415606a01f699c50 | p@chrX:160840048..160840057, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_0cd4ab26f51fed1f415606a01f699c50 | p@chr6:128920492..128920498, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_968c41ea87859f6fcb3fe78e2dfe4e13 | p1@ENSMUST00000150529 |
| 2.33e-49 | FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_968c41ea87859f6fcb3fe78e2dfe4e13 | p1@ENSMUST00000150529 |
| 1.43e-48 | FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_8aebc70b0a08b5a6e6f7b34ac938e4f5 | p@chr12:96830430..96830450, + |
| 1.43e-48 | FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_8aebc70b0a08b5a6e6f7b34ac938e4f5 | p@chr12:96830430..96830450, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:69857155..69857159,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chr8:69857155..69857159, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:78907550..78907557,+#_a2e44afeed7d127b4935f8d37740ab74 | p8@Vit |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:127573425..127573432,+#_a2e44afeed7d127b4935f8d37740ab74 | p12@Gpr39 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:24251697..24251707,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chr14:24251697..24251707, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:160839012..160839023,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chrX:160839012..160839023, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:14817013..14817022,-#_a2e44afeed7d127b4935f8d37740ab74 | p@chr17:14817013..14817022, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:160811352..160811356,-#_a2e44afeed7d127b4935f8d37740ab74 | p@chrX:160811352..160811356, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:96946110..96946113,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chr10:96946110..96946113, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:78907550..78907557,+#_a2e44afeed7d127b4935f8d37740ab74 | p8@Vit |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:14817013..14817022,-#_a2e44afeed7d127b4935f8d37740ab74 | p@chr17:14817013..14817022, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:33816181..33816195,-#_a2e44afeed7d127b4935f8d37740ab74 | p@chr10:33816181..33816195, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:160839012..160839023,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chrX:160839012..160839023, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:127573425..127573432,+#_a2e44afeed7d127b4935f8d37740ab74 | p12@Gpr39 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:96946110..96946113,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chr10:96946110..96946113, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:160811352..160811356,-#_a2e44afeed7d127b4935f8d37740ab74 | p@chrX:160811352..160811356, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:24251697..24251707,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chr14:24251697..24251707, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:33816181..33816195,-#_a2e44afeed7d127b4935f8d37740ab74 | p@chr10:33816181..33816195, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:87544959..87544962,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chr17:87544959..87544962, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:87544959..87544962,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chr17:87544959..87544962, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:69857155..69857159,+#_a2e44afeed7d127b4935f8d37740ab74 | p@chr8:69857155..69857159, + |
| 4.62e-40 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr7:91081998..91082010, - |
| 4.62e-40 | FFCP PHASE1:Mm9::chr10:67821185..67821217,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr10:67821185..67821217, - |
| 4.62e-40 | FFCP PHASE1:Mm9::chr17:29227828..29227839,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr17:29227828..29227839, - |
| 4.62e-40 | FFCP PHASE2:Mm9::chr2:113589030..113589077,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr2:113589030..113589077, - |
| 4.62e-40 | FFCP PHASE1:Mm9::chr14:24251717..24251731,+#_6f4af3e3123158d128492afd4a3abf62 | p@chr14:24251717..24251731, + |
| 4.62e-40 | FFCP PHASE1:Mm9::chr2:113589030..113589077,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr2:113589030..113589077, - |
| 4.62e-40 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr10:67598037..67598049, - |
| 4.62e-40 | FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_6f4af3e3123158d128492afd4a3abf62 | p4@Il6st |
| 4.62e-40 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr10:67598037..67598049, - |
| 4.62e-40 | FFCP PHASE2:Mm9::chr10:67821185..67821217,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr10:67821185..67821217, - |
| 4.62e-40 | FFCP PHASE2:Mm9::chr17:29227828..29227839,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr17:29227828..29227839, - |
| 4.62e-40 | FFCP PHASE2:Mm9::chr14:24251717..24251731,+#_6f4af3e3123158d128492afd4a3abf62 | p@chr14:24251717..24251731, + |
| 4.62e-40 | FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_6f4af3e3123158d128492afd4a3abf62 | p4@Il6st |
| 4.62e-40 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_6f4af3e3123158d128492afd4a3abf62 | p@chr7:91081998..91082010, - |
| 6.21e-40 | FFCP PHASE2:Mm9::chr1:165243978..165243992,-#_264270520a458561d41608d7c882404f | p9@Prrx1 |
| 6.21e-40 | FFCP PHASE1:Mm9::chr1:165243978..165243992,-#_264270520a458561d41608d7c882404f | p9@Prrx1 |
| 6.26e-40 | FFCP PHASE2:Mm9::chr4:58219542..58219545,-#_f4d985d3b82bec81d365042da5ae9b84 | p11@Svep1 |
| 6.26e-40 | FFCP PHASE1:Mm9::chr4:58219542..58219545,-#_f4d985d3b82bec81d365042da5ae9b84 | p11@Svep1 |
| 8.48e-40 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_e6f266696cd70ac7b62d92e82034ca24 | p@chrX:160838787..160838800, + |
| 8.48e-40 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_e6f266696cd70ac7b62d92e82034ca24 | p@chrX:160838787..160838800, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr1:137662814..137662817,+#_cb920e256e3cbf69da14a644472a2958 | p5@Phlda3 |
| 1.15e-39 | FFCP PHASE1:Mm9::chr1:137662814..137662817,+#_cb920e256e3cbf69da14a644472a2958 | p5@Phlda3 |
| 1.55e-39 | FFCP PHASE1:Mm9::chr15:101934961..101934970,+#_ad152f0f5f74efb3613f03049dbd500c | p@chr15:101934961..101934970, + |
| 1.55e-39 | FFCP PHASE2:Mm9::chr15:101934961..101934970,+#_ad152f0f5f74efb3613f03049dbd500c | p@chr15:101934961..101934970, + |
| 1.85e-39 | FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_a9753a1435b352430290affd643f04c4 | p@chr11:102662162..102662217, - |
| 1.85e-39 | FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_a9753a1435b352430290affd643f04c4 | p@chr11:102662162..102662217, - |
| 3.06e-38 | FFCP PHASE1:Hg19::chr1:110429102..110429103,+#_482c68a67000acc1125aa21ce3d01b46 | p@chr1:110429102..110429103, + |
| 3.06e-38 | FFCP PHASE2:Hg19::chr1:110429102..110429103,+#_482c68a67000acc1125aa21ce3d01b46 | p@chr1:110429102..110429103, + |
| 7.15e-38 | FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_0e49deb3defbf1418a2d1f2f61a2b1cf | p4@MMP1 |
| 7.15e-38 | FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_0e49deb3defbf1418a2d1f2f61a2b1cf | p4@MMP1 |
| 8.86e-38 | FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_3312364c7d015f7e2cdc8672560ac79b | p@chr11:102668178..102668206, + |
| 8.86e-38 | FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_3312364c7d015f7e2cdc8672560ac79b | p@chr11:102668178..102668206, + |
| 2.6e-34 | FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_cc191866bfb652b69a63bca3ae01420d | p3@MMP1 |
| 2.6e-34 | FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_cc191866bfb652b69a63bca3ae01420d | p3@MMP1 |
| 5.97e-34 | FFCP PHASE1:Hg19::chr11:102661061..102661115,-#_4dc8dbc1d90731ef858d4d4b1c945c46 | p@chr11:102661061..102661115, - |
| 5.97e-34 | FFCP PHASE2:Hg19::chr11:102661061..102661115,-#_4dc8dbc1d90731ef858d4d4b1c945c46 | p@chr11:102661061..102661115, - |
| 9.53e-34 | FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_fa98e2fa22a7180198c4113c8cae1a9a | p10@Gpr39 |
| 9.53e-34 | FFCP PHASE1:Mm9::chr2:178190136..178190151,+#_fa98e2fa22a7180198c4113c8cae1a9a | p@chr2:178190136..178190151, + |
| 9.53e-34 | FFCP PHASE2:Mm9::chr11:86417559..86417568,+#_fa98e2fa22a7180198c4113c8cae1a9a | p@chr11:86417559..86417568, + |
| 9.53e-34 | FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_fa98e2fa22a7180198c4113c8cae1a9a | p10@Gpr39 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "The main artery of the circulatory system which carries oxygenated blood from the heart to all the arteries of the body except those of the lungs.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
