UBERON:0000057: Difference between revisions
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{{UBERON | {{UBERON | ||
|alt_id= | |alt_id= | ||
| | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A tube which connects the urinary bladder to the outside of the body. In males, the urethra travels through the penis, and carries semen as well as urine. In females, the urethra is shorter and emerges above the vaginal opening. The external urethral sphincter is a striated muscle that allows voluntary control over urination." [Wikipedia:Urethra] | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0000164 | |develops_from=UBERON:0000164;;UBERON:0013241 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000057 | |||
|is_a=UBERON:0000062 ;;UBERON:0004120 ;;UBERON:0006554 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=urethra | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001556 | |part_of=UBERON:0001556 | ||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |||
|subset=major_organ;;organ_slim;;uberon_slim | |||
|synonym= | |||
|union_of= | |||
|xref=BTO:0001426;;EFO:0000931;;EMAPA:30901;;EV:0100099;;FMA:19667;;GAID:390;;galen:Urethra;;http://upload.wikimedia.org/wikipedia/commons/thumb/c/cb/Female_anatomy.png/200px-Female_anatomy.png;;MA:0000379;;MAT:0000121;;MESH:A.05.360.444.492.726;;MIAA:0000121;;ncithesaurus:Urethra;;OpenCyc:Mx4rvVjkypwpEbGdrcN5Y29ycA;;SCTID:302513006;;VHOG:0001264;;XAO:0000153 | |||
}} | }} | ||
Latest revision as of 17:04, 12 September 2014
| Name: | urethra | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A tube which connects the urinary bladder to the outside of the body. In males, the urethra travels through the penis, and carries semen as well as urine. In females, the urethra is shorter and emerges above the vaginal opening. The external urethral sphincter is a striated muscle that allows voluntary control over urination." [Wikipedia:Urethra] | ||
| Xrefs: |
| ||
| Subset: |
major_organ organ_slim uberon_slim |
200px-Female_anatomy.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000062(organ),UBERON:0004120(mesoderm-derived structure),UBERON:0006554(urinary system structure) |
|---|---|
| develops_from: | UBERON:0000164(primitive urogenital sinus),UBERON:0013241(embryonic urethral groove) |
| part_of: | UBERON:0001556(lower urinary tract) |
Children
| derives from: | FF:0011181 (human Urethra sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10291-104G3
- 10319-105A4 (Urethra, donor2)
- 10347-105D5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000057 (urethra), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
