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{{DOID
{{DOID
|id=DOID:962
|alt_id=
|name=neurofibroma
|namespace=disease_ontology
|def=
|xref=MSH:D009455;;NCI:C3272;;SNOMEDCT_2010_1_31:115242003;;SNOMEDCT_2010_1_31:134214003;;SNOMEDCT_2010_1_31:189947001;;SNOMEDCT_2010_1_31:404029005;;SNOMEDCT_2010_1_31:89084002;;UMLS_CUI:C0027830
|is_a=DOID:3193
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:962
|is_a=DOID:3193
|is_obsolete=
|located_in=
|located_in=
|name=neurofibroma
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=MSH:D009455;;NCI:C3272;;SNOMEDCT_2010_1_31:115242003;;SNOMEDCT_2010_1_31:134214003;;SNOMEDCT_2010_1_31:189947001;;SNOMEDCT_2010_1_31:404029005;;SNOMEDCT_2010_1_31:89084002;;UMLS_CUI:C0027830
}}
}}

Latest revision as of 16:52, 12 September 2014

Name:neurofibroma
Namespace:FANTOM
Xrefs:
links:

MSH:D009455
NCI:C3272
SNOMEDCT_2010_1_31:115242003
SNOMEDCT_2010_1_31:134214003
SNOMEDCT_2010_1_31:189947001
SNOMEDCT_2010_1_31:404029005
SNOMEDCT_2010_1_31:89084002

UMLS_CUI:C0027830

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3193(peripheral nerve sheath neoplasm)



Children


is a:FF:10728-110A8 (neuroepithelioma cell line:SK-N-MC)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:962 (neurofibroma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr1:21339635..21339636,-#_839ffd3001bbc3248154284a2df2e192p@chr1:21339635..21339636, -
1.55e-98FFCP PHASE2:Hg19::chr1:21339635..21339636,-#_839ffd3001bbc3248154284a2df2e192p@chr1:21339635..21339636, -
2.74e-50FFCP PHASE2:Hg19::chr8:12808791..12808798,+#_a6f31749b0e5b1fb9c47889ccd85c7f0p28@KIAA1456
2.74e-50FFCP PHASE2:Hg19::chr1:22696471..22696505,-#_a6f31749b0e5b1fb9c47889ccd85c7f0p@chr1:22696471..22696505, -
2.74e-50FFCP PHASE1:Hg19::chr8:12808791..12808798,+#_a6f31749b0e5b1fb9c47889ccd85c7f0p28@KIAA1456
2.74e-50FFCP PHASE1:Hg19::chr1:22696471..22696505,-#_a6f31749b0e5b1fb9c47889ccd85c7f0p@chr1:22696471..22696505, -
2.74e-50FFCP PHASE2:Hg19::chr8:37824442..37824447,-#_a6f31749b0e5b1fb9c47889ccd85c7f0p9@ADRB3
2.74e-50FFCP PHASE1:Hg19::chr8:37824442..37824447,-#_a6f31749b0e5b1fb9c47889ccd85c7f0p9@ADRB3
4.52e-50FFCP PHASE1:Hg19::chr3:193615743..193615750,-#_47de7622d3959a0c373874610811ec6cp@chr3:193615743..193615750, -
4.52e-50FFCP PHASE2:Hg19::chr8:37824009..37824022,-#_47de7622d3959a0c373874610811ec6cp3@ADRB3
4.52e-50FFCP PHASE2:Hg19::chr6:104346803..104346806,-#_47de7622d3959a0c373874610811ec6cp@chr6:104346803..104346806, -
4.52e-50FFCP PHASE2:Hg19::chr8:27041770..27041779,+#_47de7622d3959a0c373874610811ec6cp4@ENST00000521408
4.52e-50FFCP PHASE1:Hg19::chr12:45444635..45444645,-#_47de7622d3959a0c373874610811ec6cp2@AB463567
4.52e-50FFCP PHASE1:Hg19::chr6:21203484..21203485,+#_47de7622d3959a0c373874610811ec6cp@chr6:21203484..21203485, +
4.52e-50FFCP PHASE1:Hg19::chr12:69678255..69678259,+#_47de7622d3959a0c373874610811ec6cp1@ENST00000548895
4.52e-50FFCP PHASE2:Hg19::chr8:40273499..40273504,-#_47de7622d3959a0c373874610811ec6cp@chr8:40273499..40273504, -
4.52e-50FFCP PHASE1:Hg19::chr18:56886837..56886844,+#_47de7622d3959a0c373874610811ec6cp@chr18:56886837..56886844, +
4.52e-50FFCP PHASE2:Hg19::chr17:39023472..39023477,-#_47de7622d3959a0c373874610811ec6cp1@KRT12
4.52e-50FFCP PHASE1:Hg19::chr8:37824009..37824022,-#_47de7622d3959a0c373874610811ec6cp3@ADRB3
4.52e-50FFCP PHASE1:Hg19::chr6:104346803..104346806,-#_47de7622d3959a0c373874610811ec6cp@chr6:104346803..104346806, -
4.52e-50FFCP PHASE1:Hg19::chr8:27041770..27041779,+#_47de7622d3959a0c373874610811ec6cp4@ENST00000521408
4.52e-50FFCP PHASE2:Hg19::chr8:37824071..37824078,-#_47de7622d3959a0c373874610811ec6cp5@ADRB3
4.52e-50FFCP PHASE1:Hg19::chr8:40273499..40273504,-#_47de7622d3959a0c373874610811ec6cp@chr8:40273499..40273504, -
4.52e-50FFCP PHASE2:Hg19::chr2:242742205..242742253,+#_47de7622d3959a0c373874610811ec6cp@chr2:242742205..242742253, +
4.52e-50FFCP PHASE1:Hg19::chr8:37824071..37824078,-#_47de7622d3959a0c373874610811ec6cp5@ADRB3
4.52e-50FFCP PHASE2:Hg19::chr12:45444635..45444645,-#_47de7622d3959a0c373874610811ec6cp2@AB463567
4.52e-50FFCP PHASE2:Hg19::chr18:56886837..56886844,+#_47de7622d3959a0c373874610811ec6cp@chr18:56886837..56886844, +
4.52e-50FFCP PHASE1:Hg19::chr2:242742205..242742253,+#_47de7622d3959a0c373874610811ec6cp@chr2:242742205..242742253, +
4.52e-50FFCP PHASE2:Hg19::chr12:69678255..69678259,+#_47de7622d3959a0c373874610811ec6cp1@ENST00000548895
4.52e-50FFCP PHASE2:Hg19::chr4:155299368..155299375,-#_47de7622d3959a0c373874610811ec6cp@chr4:155299368..155299375, -
4.52e-50FFCP PHASE2:Hg19::chrX:52006984..52006993,+#_47de7622d3959a0c373874610811ec6cp@chrX:52006984..52006993, +
4.52e-50FFCP PHASE2:Hg19::chr7:91509972..91509984,-#_47de7622d3959a0c373874610811ec6cp3@MTERF
4.52e-50FFCP PHASE1:Hg19::chr4:155299368..155299375,-#_47de7622d3959a0c373874610811ec6cp@chr4:155299368..155299375, -
4.52e-50FFCP PHASE1:Hg19::chr17:39023472..39023477,-#_47de7622d3959a0c373874610811ec6cp1@KRT12
4.52e-50FFCP PHASE2:Hg19::chr6:21203484..21203485,+#_47de7622d3959a0c373874610811ec6cp@chr6:21203484..21203485, +
4.52e-50FFCP PHASE1:Hg19::chrX:52006984..52006993,+#_47de7622d3959a0c373874610811ec6cp@chrX:52006984..52006993, +
4.52e-50FFCP PHASE2:Hg19::chr3:193615743..193615750,-#_47de7622d3959a0c373874610811ec6cp@chr3:193615743..193615750, -
4.52e-50FFCP PHASE1:Hg19::chr7:91509972..91509984,-#_47de7622d3959a0c373874610811ec6cp3@MTERF
3.61e-34FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_9dcca24730b5e38504a95123d0ea29c4p2@KRT12
3.61e-34FFCP PHASE2:Hg19::chr5:147011027..147011032,-#_9dcca24730b5e38504a95123d0ea29c4p@chr5:147011027..147011032, -
3.61e-34FFCP PHASE1:Hg19::chr5:147011027..147011032,-#_9dcca24730b5e38504a95123d0ea29c4p@chr5:147011027..147011032, -
3.61e-34FFCP PHASE2:Hg19::chr5:147011039..147011055,-#_9dcca24730b5e38504a95123d0ea29c4p@chr5:147011039..147011055, -
3.61e-34FFCP PHASE1:Hg19::chr19:49915463..49915468,+#_9dcca24730b5e38504a95123d0ea29c4p@chr19:49915463..49915468, +
3.61e-34FFCP PHASE1:Hg19::chr5:147011039..147011055,-#_9dcca24730b5e38504a95123d0ea29c4p@chr5:147011039..147011055, -
3.61e-34FFCP PHASE2:Hg19::chr5:147011082..147011102,-#_9dcca24730b5e38504a95123d0ea29c4p@chr5:147011082..147011102, -
3.61e-34FFCP PHASE2:Hg19::chr8:37824176..37824185,-#_9dcca24730b5e38504a95123d0ea29c4p4@ADRB3
3.61e-34FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_9dcca24730b5e38504a95123d0ea29c4p2@KRT12
3.61e-34FFCP PHASE1:Hg19::chr5:147011082..147011102,-#_9dcca24730b5e38504a95123d0ea29c4p@chr5:147011082..147011102, -
3.61e-34FFCP PHASE1:Hg19::chr8:37824176..37824185,-#_9dcca24730b5e38504a95123d0ea29c4p4@ADRB3
3.61e-34FFCP PHASE2:Hg19::chr19:49915463..49915468,+#_9dcca24730b5e38504a95123d0ea29c4p@chr19:49915463..49915468, +
5.04e-34FFCP PHASE1:Hg19::chrX:2715135..2715149,+#_388a1679c471896219fe6a9c5ae2601ap@chrX:2715135..2715149, +
5.04e-34FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_388a1679c471896219fe6a9c5ae2601ap@chr7:119353807..119353812, -
5.04e-34FFCP PHASE1:Hg19::chr8:37560262..37560269,-#_388a1679c471896219fe6a9c5ae2601ap@chr8:37560262..37560269, -
5.04e-34FFCP PHASE2:Hg19::chr1:114654778..114654823,+#_388a1679c471896219fe6a9c5ae2601ap@chr1:114654778..114654823, +
5.04e-34FFCP PHASE2:Hg19::chr20:21087017..21087026,-#_388a1679c471896219fe6a9c5ae2601ap3@LINC00237
5.04e-34FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_388a1679c471896219fe6a9c5ae2601ap@chr7:119353807..119353812, -
5.04e-34FFCP PHASE1:Hg19::chr10:72538478..72538484,-#_388a1679c471896219fe6a9c5ae2601ap@chr10:72538478..72538484, -
5.04e-34FFCP PHASE1:Hg19::chr20:21087017..21087026,-#_388a1679c471896219fe6a9c5ae2601ap3@LINC00237
5.04e-34FFCP PHASE2:Hg19::chr1:18957380..18957386,+#_388a1679c471896219fe6a9c5ae2601ap10@PAX7
5.04e-34FFCP PHASE1:Hg19::chr1:114654778..114654823,+#_388a1679c471896219fe6a9c5ae2601ap@chr1:114654778..114654823, +
5.04e-34FFCP PHASE2:Hg19::chr10:72538478..72538484,-#_388a1679c471896219fe6a9c5ae2601ap@chr10:72538478..72538484, -
5.04e-34FFCP PHASE2:Hg19::chrX:2715135..2715149,+#_388a1679c471896219fe6a9c5ae2601ap@chrX:2715135..2715149, +
5.04e-34FFCP PHASE1:Hg19::chr1:18957380..18957386,+#_388a1679c471896219fe6a9c5ae2601ap10@PAX7
5.04e-34FFCP PHASE2:Hg19::chr8:37560262..37560269,-#_388a1679c471896219fe6a9c5ae2601ap@chr8:37560262..37560269, -
7.05e-34FFCP PHASE2:Hg19::chr9:15885823..15885844,+#_2cd1befd3dea5051399983b930be7882p@chr9:15885823..15885844, +
7.05e-34FFCP PHASE2:Hg19::chr2:72803155..72803204,-#_2cd1befd3dea5051399983b930be7882p@chr2:72803155..72803204, -
7.05e-34FFCP PHASE1:Hg19::chr8:27009314..27009357,-#_2cd1befd3dea5051399983b930be7882p@chr8:27009314..27009357, -
7.05e-34FFCP PHASE2:Hg19::chr19:48876418..48876427,+#_2cd1befd3dea5051399983b930be7882p@chr19:48876418..48876427, +
7.05e-34FFCP PHASE2:Hg19::chr13:114108187..114108229,-#_2cd1befd3dea5051399983b930be7882p12@ADPRHL1
7.05e-34FFCP PHASE1:Hg19::chr9:15885823..15885844,+#_2cd1befd3dea5051399983b930be7882p@chr9:15885823..15885844, +
7.05e-34FFCP PHASE1:Hg19::chr13:33760224..33760234,-#_2cd1befd3dea5051399983b930be7882p15@STARD13
7.05e-34FFCP PHASE2:Hg19::chr8:128808429..128808430,+#_2cd1befd3dea5051399983b930be7882p@chr8:128808429..128808430, +
7.05e-34FFCP PHASE1:Hg19::chr17:31624987..31624990,+#_2cd1befd3dea5051399983b930be7882p@chr17:31624987..31624990, +
7.05e-34FFCP PHASE1:Hg19::chr2:72803155..72803204,-#_2cd1befd3dea5051399983b930be7882p@chr2:72803155..72803204, -
7.05e-34FFCP PHASE2:Hg19::chr2:212586166..212586168,-#_2cd1befd3dea5051399983b930be7882p@chr2:212586166..212586168, -
7.05e-34FFCP PHASE1:Hg19::chr8:128808429..128808430,+#_2cd1befd3dea5051399983b930be7882p@chr8:128808429..128808430, +
7.05e-34FFCP PHASE2:Hg19::chr8:144099758..144099767,-#_2cd1befd3dea5051399983b930be7882p4@ENST00000522060
7.05e-34FFCP PHASE1:Hg19::chr2:212586166..212586168,-#_2cd1befd3dea5051399983b930be7882p@chr2:212586166..212586168, -
7.05e-34FFCP PHASE1:Hg19::chr8:144099758..144099767,-#_2cd1befd3dea5051399983b930be7882p4@ENST00000522060
7.05e-34FFCP PHASE1:Hg19::chr11:126898086..126898090,-#_2cd1befd3dea5051399983b930be7882p@chr11:126898086..126898090, -
7.05e-34FFCP PHASE2:Hg19::chr17:31624987..31624990,+#_2cd1befd3dea5051399983b930be7882p@chr17:31624987..31624990, +
7.05e-34FFCP PHASE2:Hg19::chr13:33760224..33760234,-#_2cd1befd3dea5051399983b930be7882p15@STARD13
7.05e-34FFCP PHASE2:Hg19::chr2:234699525..234699537,+#_2cd1befd3dea5051399983b930be7882p@chr2:234699525..234699537, +
7.05e-34FFCP PHASE1:Hg19::chr19:48876418..48876427,+#_2cd1befd3dea5051399983b930be7882p@chr19:48876418..48876427, +
7.05e-34FFCP PHASE1:Hg19::chr13:114108187..114108229,-#_2cd1befd3dea5051399983b930be7882p12@ADPRHL1
7.05e-34FFCP PHASE1:Hg19::chr2:234699525..234699537,+#_2cd1befd3dea5051399983b930be7882p@chr2:234699525..234699537, +
7.05e-34FFCP PHASE2:Hg19::chr2:4634459..4634466,+#_2cd1befd3dea5051399983b930be7882p@chr2:4634459..4634466, +
7.05e-34FFCP PHASE2:Hg19::chr11:126898086..126898090,-#_2cd1befd3dea5051399983b930be7882p@chr11:126898086..126898090, -
7.05e-34FFCP PHASE1:Hg19::chr2:4634459..4634466,+#_2cd1befd3dea5051399983b930be7882p@chr2:4634459..4634466, +
7.05e-34FFCP PHASE2:Hg19::chr8:27009314..27009357,-#_2cd1befd3dea5051399983b930be7882p@chr8:27009314..27009357, -
2.97e-31FFCP PHASE2:Hg19::chr7:48000546..48000554,-#_20d5d5845768907bede9ea4c2fa537a1p@chr7:48000546..48000554, -
2.97e-31FFCP PHASE1:Hg19::chr7:48000546..48000554,-#_20d5d5845768907bede9ea4c2fa537a1p@chr7:48000546..48000554, -
4.32e-26FFCP PHASE1:Hg19::chr1:18905937..18905940,-#_94aefcd73ff9ca70c9c05b8802e2ac7fp@chr1:18905937..18905940, -
4.32e-26FFCP PHASE2:Hg19::chr19:49950830..49950836,-#_94aefcd73ff9ca70c9c05b8802e2ac7fp@chr19:49950830..49950836, -
4.32e-26FFCP PHASE1:Hg19::chr10:29717478..29717509,-#_94aefcd73ff9ca70c9c05b8802e2ac7fp@chr10:29717478..29717509, -
4.32e-26FFCP PHASE2:Hg19::chr15:90017749..90017754,+#_94aefcd73ff9ca70c9c05b8802e2ac7fp@chr15:90017749..90017754, +
4.32e-26FFCP PHASE2:Hg19::chr1:18905937..18905940,-#_94aefcd73ff9ca70c9c05b8802e2ac7fp@chr1:18905937..18905940, -
4.32e-26FFCP PHASE2:Hg19::chr10:29717478..29717509,-#_94aefcd73ff9ca70c9c05b8802e2ac7fp@chr10:29717478..29717509, -
4.32e-26FFCP PHASE1:Hg19::chr19:49950830..49950836,-#_94aefcd73ff9ca70c9c05b8802e2ac7fp@chr19:49950830..49950836, -
4.32e-26FFCP PHASE2:Hg19::chr7:23514264..23514271,+#_94aefcd73ff9ca70c9c05b8802e2ac7fp@chr7:23514264..23514271, +

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