Personal tools

DOID:8675: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{DOID
{{DOID
|id=DOID:8675
|alt_id=DOID:8967
|name=lymphosarcoma
|namespace=disease_ontology
|def=
|xref=ICD9CM:200.1;;MSH:D008228;;NCI:C26919;;SNOMEDCT_2010_1_31:115244002;;SNOMEDCT_2010_1_31:134218000;;SNOMEDCT_2010_1_31:154580009;;SNOMEDCT_2010_1_31:188498009;;SNOMEDCT_2010_1_31:188508003;;SNOMEDCT_2010_1_31:189964003;;SNOMEDCT_2010_1_31:1929004;;SNOMEDCT_2010_1_31:67824002;;UMLS_CUI:C0079734
|is_a=DOID:0060073
|synonym="Diffuse lymphoma" EXACT [MTHICD9_2006:202.8];;"malignant lymphoma (category)" EXACT [SNOMEDCT_2005_07_31:115244002]
|comment=
|comment=
|alt_id=DOID:8967
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:8675
|is_a=DOID:0060073
|is_obsolete=
|located_in=
|located_in=
|name=lymphosarcoma
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="Diffuse lymphoma" EXACT [MTHICD9_2006:202.8];;"malignant lymphoma (category)" EXACT [SNOMEDCT_2005_07_31:115244002]
|union_of=
|xref=ICD9CM:200.1;;MSH:D008228;;NCI:C26919;;SNOMEDCT_2010_1_31:115244002;;SNOMEDCT_2010_1_31:134218000;;SNOMEDCT_2010_1_31:154580009;;SNOMEDCT_2010_1_31:188498009;;SNOMEDCT_2010_1_31:188508003;;SNOMEDCT_2010_1_31:189964003;;SNOMEDCT_2010_1_31:1929004;;SNOMEDCT_2010_1_31:67824002;;UMLS_CUI:C0079734
}}
}}

Latest revision as of 16:52, 12 September 2014

Name:lymphosarcoma
Namespace:FANTOM
Xrefs:
links:

ICD9CM:200.1
MSH:D008228
NCI:C26919
SNOMEDCT_2010_1_31:115244002
SNOMEDCT_2010_1_31:134218000
SNOMEDCT_2010_1_31:154580009
SNOMEDCT_2010_1_31:188498009
SNOMEDCT_2010_1_31:188508003
SNOMEDCT_2010_1_31:189964003
SNOMEDCT_2010_1_31:1929004
SNOMEDCT_2010_1_31:67824002

UMLS_CUI:C0079734
Synonyms: "Diffuse lymphoma" EXACT [MTHICD9_2006:202.8]
"malignant lymphoma (category)" EXACT [SNOMEDCT_2005_07_31:115244002]
Alt_id: DOID:8967

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:0060073(lymphatic system cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)

Mouse (Mus musculus)

  • 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:8675 (lymphosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr6:39962337..39962342,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr6:39962337..39962342, +
5.42e-195FFCP PHASE2:Hg19::chr22:23234780..23234786,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr22:23234780..23234786, +
5.42e-195FFCP PHASE1:Hg19::chr12:117256221..117256231,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr12:117256221..117256231, +
5.42e-195FFCP PHASE1:Hg19::chrX:42727038..42727047,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chrX:42727038..42727047, -
5.42e-195FFCP PHASE1:Hg19::chr9:138904824..138904829,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr9:138904824..138904829, +
5.42e-195FFCP PHASE2:Hg19::chrX:42727038..42727047,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chrX:42727038..42727047, -
5.42e-195FFCP PHASE2:Hg19::chr9:138904824..138904829,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr9:138904824..138904829, +
5.42e-195FFCP PHASE2:Hg19::chr11:26124040..26124064,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr11:26124040..26124064, -
5.42e-195FFCP PHASE1:Hg19::chr15:66464730..66464736,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr15:66464730..66464736, -
5.42e-195FFCP PHASE1:Hg19::chr4:8046897..8046900,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr4:8046897..8046900, +
5.42e-195FFCP PHASE1:Hg19::chr12:122458855..122458857,+#_de9e83b28096c2d0cfc5ea3c986496d8p16@BCL7A
5.42e-195FFCP PHASE2:Hg19::chr4:8046897..8046900,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr4:8046897..8046900, +
5.42e-195FFCP PHASE1:Hg19::chr4:176353908..176353917,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr4:176353908..176353917, -
5.42e-195FFCP PHASE2:Hg19::chr12:117256221..117256231,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr12:117256221..117256231, +
5.42e-195FFCP PHASE2:Hg19::chr15:66464730..66464736,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr15:66464730..66464736, -
5.42e-195FFCP PHASE2:Hg19::chr4:176353908..176353917,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr4:176353908..176353917, -
5.42e-195FFCP PHASE1:Hg19::chr12:8808206..8808209,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr12:8808206..8808209, -
5.42e-195FFCP PHASE2:Hg19::chr12:4313331..4313334,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr12:4313331..4313334, +
5.42e-195FFCP PHASE1:Hg19::chr4:8046990..8046993,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr4:8046990..8046993, -
5.42e-195FFCP PHASE2:Hg19::chr12:8808206..8808209,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr12:8808206..8808209, -
5.42e-195FFCP PHASE2:Hg19::chr4:8046990..8046993,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr4:8046990..8046993, -
5.42e-195FFCP PHASE1:Hg19::chr4:176358284..176358287,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr4:176358284..176358287, -
5.42e-195FFCP PHASE1:Hg19::chr12:4313331..4313334,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr12:4313331..4313334, +
5.42e-195FFCP PHASE2:Hg19::chr4:176358284..176358287,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr4:176358284..176358287, -
5.42e-195FFCP PHASE1:Hg19::chr12:122462770..122462775,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr12:122462770..122462775, +
5.42e-195FFCP PHASE2:Hg19::chr12:122458855..122458857,+#_de9e83b28096c2d0cfc5ea3c986496d8p16@BCL7A
5.42e-195FFCP PHASE1:Hg19::chr6:39962295..39962305,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr6:39962295..39962305, +
5.42e-195FFCP PHASE1:Hg19::chrX:89012355..89012363,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chrX:89012355..89012363, +
5.42e-195FFCP PHASE1:Hg19::chr11:26122006..26122011,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr11:26122006..26122011, -
5.42e-195FFCP PHASE2:Hg19::chr6:39962295..39962305,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr6:39962295..39962305, +
5.42e-195FFCP PHASE1:Hg19::chr3:19436672..19436686,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr3:19436672..19436686, +
5.42e-195FFCP PHASE2:Hg19::chrX:89012355..89012363,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chrX:89012355..89012363, +
5.42e-195FFCP PHASE2:Hg19::chr3:19436672..19436686,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr3:19436672..19436686, +
5.42e-195FFCP PHASE1:Hg19::chr14:53594794..53594799,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr14:53594794..53594799, +
5.42e-195FFCP PHASE2:Hg19::chr12:122462770..122462775,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr12:122462770..122462775, +
5.42e-195FFCP PHASE2:Hg19::chr11:26122006..26122011,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr11:26122006..26122011, -
5.42e-195FFCP PHASE1:Hg19::chr6:39962337..39962342,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr6:39962337..39962342, +
5.42e-195FFCP PHASE1:Hg19::chr22:23234780..23234786,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr22:23234780..23234786, +
5.42e-195FFCP PHASE2:Hg19::chr14:53594794..53594799,+#_de9e83b28096c2d0cfc5ea3c986496d8p@chr14:53594794..53594799, +
5.42e-195FFCP PHASE1:Hg19::chr11:26124040..26124064,-#_de9e83b28096c2d0cfc5ea3c986496d8p@chr11:26124040..26124064, -
9.37e-99FFCP PHASE1:Hg19::chr8:9578005..9578014,+#_3d6b18bb2646d3511c71ba1a2c019163p22@TNKS
9.37e-99FFCP PHASE1:Hg19::chr15:66446191..66446202,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr15:66446191..66446202, -
9.37e-99FFCP PHASE2:Hg19::chr12:122459199..122459208,+#_3d6b18bb2646d3511c71ba1a2c019163p13@BCL7A
9.37e-99FFCP PHASE2:Hg19::chr8:9578005..9578014,+#_3d6b18bb2646d3511c71ba1a2c019163p22@TNKS
9.37e-99FFCP PHASE1:Hg19::chr4:176346295..176346296,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr4:176346295..176346296, -
9.37e-99FFCP PHASE2:Hg19::chr15:66446191..66446202,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr15:66446191..66446202, -
9.37e-99FFCP PHASE2:Hg19::chr4:176346295..176346296,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr4:176346295..176346296, -
9.37e-99FFCP PHASE2:Hg19::chr7:47225953..47225964,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr7:47225953..47225964, -
9.37e-99FFCP PHASE1:Hg19::chrX:42727059..42727068,-#_3d6b18bb2646d3511c71ba1a2c019163p@chrX:42727059..42727068, -
9.37e-99FFCP PHASE2:Hg19::chr12:4313305..4313315,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr12:4313305..4313315, +
9.37e-99FFCP PHASE1:Hg19::chr9:71805723..71805737,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr9:71805723..71805737, +
9.37e-99FFCP PHASE2:Hg19::chr9:71805723..71805737,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr9:71805723..71805737, +
9.37e-99FFCP PHASE2:Hg19::chrX:42727059..42727068,-#_3d6b18bb2646d3511c71ba1a2c019163p@chrX:42727059..42727068, -
9.37e-99FFCP PHASE1:Hg19::chr7:47225953..47225964,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr7:47225953..47225964, -
9.37e-99FFCP PHASE1:Hg19::chr12:4313305..4313315,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr12:4313305..4313315, +
9.37e-99FFCP PHASE1:Hg19::chr14:106332392..106332397,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr14:106332392..106332397, -
9.37e-99FFCP PHASE1:Hg19::chr11:27062798..27062805,+#_3d6b18bb2646d3511c71ba1a2c019163p15@BBOX1
9.37e-99FFCP PHASE1:Hg19::chr14:91750002..91750014,-#_3d6b18bb2646d3511c71ba1a2c019163p21@CCDC88C
9.37e-99FFCP PHASE2:Hg19::chr7:47225965..47225970,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr7:47225965..47225970, -
9.37e-99FFCP PHASE1:Hg19::chr9:120707790..120707797,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr9:120707790..120707797, -
9.37e-99FFCP PHASE1:Hg19::chr9:96059957..96059996,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr9:96059957..96059996, +
9.37e-99FFCP PHASE2:Hg19::chr14:106332392..106332397,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr14:106332392..106332397, -
9.37e-99FFCP PHASE2:Hg19::chr9:96059957..96059996,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr9:96059957..96059996, +
9.37e-99FFCP PHASE2:Hg19::chr14:91750002..91750014,-#_3d6b18bb2646d3511c71ba1a2c019163p21@CCDC88C
9.37e-99FFCP PHASE1:Hg19::chr6:39962285..39962290,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr6:39962285..39962290, +
9.37e-99FFCP PHASE2:Hg19::chr9:120707790..120707797,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr9:120707790..120707797, -
9.37e-99FFCP PHASE1:Hg19::chr12:11905335..11905342,+#_3d6b18bb2646d3511c71ba1a2c019163p28@ETV6
9.37e-99FFCP PHASE1:Hg19::chr7:47225965..47225970,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr7:47225965..47225970, -
9.37e-99FFCP PHASE2:Hg19::chr6:39962285..39962290,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr6:39962285..39962290, +
9.37e-99FFCP PHASE2:Hg19::chr11:27062798..27062805,+#_3d6b18bb2646d3511c71ba1a2c019163p15@BBOX1
9.37e-99FFCP PHASE1:Hg19::chr15:66446160..66446166,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr15:66446160..66446166, -
9.37e-99FFCP PHASE2:Hg19::chr7:47226019..47226026,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr7:47226019..47226026, -
9.37e-99FFCP PHASE2:Hg19::chr15:66446160..66446166,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr15:66446160..66446166, -
9.37e-99FFCP PHASE1:Hg19::chr12:122459199..122459208,+#_3d6b18bb2646d3511c71ba1a2c019163p13@BCL7A
9.37e-99FFCP PHASE1:Hg19::chr7:47226019..47226026,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr7:47226019..47226026, -
9.37e-99FFCP PHASE2:Hg19::chr7:47143537..47143540,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr7:47143537..47143540, -
9.37e-99FFCP PHASE1:Hg19::chr10:560037..560049,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr10:560037..560049, -
9.37e-99FFCP PHASE1:Hg19::chr15:84653070..84653073,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr15:84653070..84653073, +
9.37e-99FFCP PHASE1:Hg19::chrX:42727011..42727017,-#_3d6b18bb2646d3511c71ba1a2c019163p@chrX:42727011..42727017, -
9.37e-99FFCP PHASE1:Hg19::chr15:66446174..66446184,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr15:66446174..66446184, -
9.37e-99FFCP PHASE2:Hg19::chr10:560037..560049,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr10:560037..560049, -
9.37e-99FFCP PHASE2:Hg19::chr12:11905335..11905342,+#_3d6b18bb2646d3511c71ba1a2c019163p28@ETV6
9.37e-99FFCP PHASE2:Hg19::chr15:84653070..84653073,+#_3d6b18bb2646d3511c71ba1a2c019163p@chr15:84653070..84653073, +
9.37e-99FFCP PHASE2:Hg19::chrX:42727011..42727017,-#_3d6b18bb2646d3511c71ba1a2c019163p@chrX:42727011..42727017, -
9.37e-99FFCP PHASE1:Hg19::chr7:47143537..47143540,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr7:47143537..47143540, -
9.37e-99FFCP PHASE2:Hg19::chr15:66446174..66446184,-#_3d6b18bb2646d3511c71ba1a2c019163p@chr15:66446174..66446184, -
2.55e-98FFCP PHASE1:Hg19::chr5:78065881..78065890,-#_c7eba28671b3b242827bf47658b7dd0cp29@LHFPL2
2.55e-98FFCP PHASE2:Hg19::chr8:2507680..2507685,+#_c7eba28671b3b242827bf47658b7dd0cp@chr8:2507680..2507685, +
2.55e-98FFCP PHASE1:Hg19::chr8:49585125..49585132,+#_c7eba28671b3b242827bf47658b7dd0cp@chr8:49585125..49585132, +
2.55e-98FFCP PHASE1:Hg19::chr9:37327716..37327725,+#_c7eba28671b3b242827bf47658b7dd0cp12@ZCCHC7
2.55e-98FFCP PHASE2:Hg19::chr11:23621457..23621480,+#_c7eba28671b3b242827bf47658b7dd0cp@chr11:23621457..23621480, +
2.55e-98FFCP PHASE1:Hg19::chr17:70016724..70016733,-#_c7eba28671b3b242827bf47658b7dd0cp@chr17:70016724..70016733, -
2.55e-98FFCP PHASE2:Hg19::chr5:78065881..78065890,-#_c7eba28671b3b242827bf47658b7dd0cp29@LHFPL2
2.55e-98FFCP PHASE2:Hg19::chr9:37327716..37327725,+#_c7eba28671b3b242827bf47658b7dd0cp12@ZCCHC7
2.55e-98FFCP PHASE2:Hg19::chr8:49585125..49585132,+#_c7eba28671b3b242827bf47658b7dd0cp@chr8:49585125..49585132, +
2.55e-98FFCP PHASE1:Hg19::chr4:81952607..81952617,+#_c7eba28671b3b242827bf47658b7dd0cp7@BMP3
2.55e-98FFCP PHASE2:Hg19::chr17:70016724..70016733,-#_c7eba28671b3b242827bf47658b7dd0cp@chr17:70016724..70016733, -
2.55e-98FFCP PHASE2:Hg19::chr4:81952607..81952617,+#_c7eba28671b3b242827bf47658b7dd0cp7@BMP3
2.55e-98FFCP PHASE1:Hg19::chr14:91749975..91749987,-#_c7eba28671b3b242827bf47658b7dd0cp11@CCDC88C
2.55e-98FFCP PHASE2:Hg19::chr2:54855884..54855893,+#_c7eba28671b3b242827bf47658b7dd0cp@chr2:54855884..54855893, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=DOID:8675&oldid=3275738"