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{{DOID
{{DOID
|id=DOID:2671
|alt_id=DOID:3995
|name=transitional cell carcinoma
|namespace=disease_ontology
|def="A carcinoma that derives_from transitional epithelial cells." [url:http\://en.wikipedia.org/wiki/Transitional_cell_carcinoma]
|xref=MSH:D002295;;NCI:C2930;;NCI:C4030;;SNOMEDCT_2010_1_31:118287003;;SNOMEDCT_2010_1_31:189576006;;SNOMEDCT_2010_1_31:27090000;;UMLS_CUI:C0007138;;UMLS_CUI:C0334265
|is_a=DOID:305
|synonym="transitional carcinoma" EXACT [NCI2004_11_17:C2930];;"transitional cell carcinoma" EXACT [CSP2005:2000-9838];;"transitional cell carcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:27090000];;"transitional cell carcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189576006];;"transitional cell carcinoma of the urinary tract" EXACT [NCI2004_11_17:C4030];;"transitional cell neoplasm" RELATED [];;"transitional cell neoplasm (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:118287003];;"transitional cell tumor" EXACT [NCI2004_11_17:C6783]
|comment=
|comment=
|alt_id=DOID:3995
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A carcinoma that derives_from transitional epithelial cells." [url:http://en.wikipedia.org/wiki/Transitional_cell_carcinoma]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:2671
|is_a=DOID:305
|is_obsolete=
|located_in=
|located_in=
|name=transitional cell carcinoma
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="transitional carcinoma" EXACT [NCI2004_11_17:C2930];;"transitional cell carcinoma" EXACT [CSP2005:2000-9838];;"transitional cell carcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:27090000];;"transitional cell carcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189576006];;"transitional cell carcinoma of the urinary tract" EXACT [NCI2004_11_17:C4030];;"transitional cell neoplasm" RELATED [];;"transitional cell neoplasm (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:118287003];;"transitional cell tumor" EXACT [NCI2004_11_17:C6783]
|union_of=
|xref=MSH:D002295;;NCI:C2930;;NCI:C4030;;SNOMEDCT_2010_1_31:118287003;;SNOMEDCT_2010_1_31:189576006;;SNOMEDCT_2010_1_31:27090000;;UMLS_CUI:C0007138;;UMLS_CUI:C0334265
}}
}}

Latest revision as of 16:50, 12 September 2014

Name:transitional cell carcinoma
Namespace:FANTOM
Definition:"A carcinoma that derives_from transitional epithelial cells." [url:http://en.wikipedia.org/wiki/Transitional_cell_carcinoma]
Xrefs:
links:

MSH:D002295
NCI:C2930
NCI:C4030
SNOMEDCT_2010_1_31:118287003
SNOMEDCT_2010_1_31:189576006
SNOMEDCT_2010_1_31:27090000
UMLS_CUI:C0007138

UMLS_CUI:C0334265
Synonyms: "transitional carcinoma" EXACT [NCI2004_11_17:C2930]
"transitional cell carcinoma" EXACT [CSP2005:2000-9838]
"transitional cell carcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:27090000]
"transitional cell carcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189576006]
"transitional cell carcinoma of the urinary tract" EXACT [NCI2004_11_17:C4030]
"transitional cell neoplasm" RELATED []
"transitional cell neoplasm (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:118287003]
"transitional cell tumor" EXACT [NCI2004_11_17:C6783]
Alt_id: DOID:3995

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:305(carcinoma)



Children


is a:FF:10707-109H5 (transitional cell carcinoma cell line:Hs 769.T)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10707-109H5 (transitional cell carcinoma cell line:Hs 769.T)

Mouse (Mus musculus)

  • 10707-109H5 (transitional cell carcinoma cell line:Hs 769.T)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:2671 (transitional cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results