CL:0002544: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="An arterial endothelial cell that is part of the aorta endothelium." [GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002544 | |||
|is_a=CL:1000413 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=aortic endothelial cell | |||
|namespace=FANTOM | |||
|obo_creation_date=2011-02-28T03:54:42Z | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=BTO:0003245 | |||
}} | }} | ||
Latest revision as of 16:43, 12 September 2014
| Name: | aortic endothelial cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An arterial endothelial cell that is part of the aorta endothelium." [GOC:tfm] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2011-02-28T03:54:42Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:1000413(endothelial cell of artery) |
|---|
Children
| is a: | CL:0002545 (thoracic aorta endothelial cell) |
|---|---|
| derives from: | FF:0000048 (human endothelial cell of the aorta sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11343-117G2 (Endothelial Cells - Thoracic, donor2)
- 11412-118E8 (Endothelial Cells - Aortic, donor3)
- 11415-118F2
Mouse (Mus musculus)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11343-117G2 (Endothelial Cells - Thoracic, donor2)
- 11412-118E8 (Endothelial Cells - Aortic, donor3)
- 11415-118F2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002544 (aortic endothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.1e-59 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_896eef77dd10a5275698dbc936e96430 | p@chr12:105863705..105863718, + |
| 3.1e-59 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_896eef77dd10a5275698dbc936e96430 | p@chr12:105863705..105863718, + |
| 2.12e-58 | FFCP PHASE2:Hg19::chr5:63803524..63803561,+#_6040fc9b4b7b4a04b3ff0829c0f4aeda | p15@RGS7BP |
| 2.12e-58 | FFCP PHASE1:Hg19::chr5:63803524..63803561,+#_6040fc9b4b7b4a04b3ff0829c0f4aeda | p15@RGS7BP |
| 5.77e-58 | FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_d7f3e20ff3c004650269172a8610d443 | p4@EIF2B2 |
| 5.77e-58 | FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_d7f3e20ff3c004650269172a8610d443 | p4@EIF2B2 |
| 5.92e-57 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_b12395401c898e416e32b5ac9ae8ce22 | p@chr18:33046982..33046991, - |
| 5.92e-57 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_b12395401c898e416e32b5ac9ae8ce22 | p@chr18:33046982..33046991, - |
| 1.55e-56 | FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_31099ccd623ca61355497558fcc9331f | p5@PARP12 |
| 1.55e-56 | FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_31099ccd623ca61355497558fcc9331f | p5@PARP12 |
| 7.9e-53 | FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_954f4dade5097be7d70e72b49b47398b | p@chr6:11607864..11607875, + |
| 7.9e-53 | FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_954f4dade5097be7d70e72b49b47398b | p@chr6:11607864..11607875, + |
| 3.82e-52 | FFCP PHASE2:Hg19::chr15:39722548..39722553,+#_3ece8bc14061fc2d2631b063c5be83a4 | p@chr15:39722548..39722553, + |
| 3.82e-52 | FFCP PHASE1:Hg19::chr15:39722548..39722553,+#_3ece8bc14061fc2d2631b063c5be83a4 | p@chr15:39722548..39722553, + |
| 4.97e-52 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_f537876c768bc1acbe0f629a022b8f73 | p@chr6:78171774..78171792, + |
| 4.97e-52 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_f537876c768bc1acbe0f629a022b8f73 | p@chr6:78171774..78171792, + |
| 8.2e-51 | FFCP PHASE2:Hg19::chrX:128781635..128781648,-#_d2a34de5577b81ff6c05a5acc9bd158e | p@chrX:128781635..128781648, - |
| 8.2e-51 | FFCP PHASE1:Hg19::chrX:128781635..128781648,-#_d2a34de5577b81ff6c05a5acc9bd158e | p@chrX:128781635..128781648, - |
| 1.05e-50 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_56eb260f92ae54c61085c92a1ad09d95 | p8@GIMAP6 |
| 1.05e-50 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_56eb260f92ae54c61085c92a1ad09d95 | p8@GIMAP6 |
| 6.35e-50 | FFCP PHASE1:Hg19::chrX:26933473..26933478,+#_586b91caef1447ffa5b4978564112a74 | p@chrX:26933473..26933478, + |
| 6.35e-50 | FFCP PHASE2:Hg19::chrX:26933473..26933478,+#_586b91caef1447ffa5b4978564112a74 | p@chrX:26933473..26933478, + |
| 1.77e-48 | FFCP PHASE1:Hg19::chr9:133992897..133992908,+#_c913676ca53d3f47ad19362d9f3c791f | p@chr9:133992897..133992908, + |
| 1.77e-48 | FFCP PHASE2:Hg19::chr9:133992897..133992908,+#_c913676ca53d3f47ad19362d9f3c791f | p@chr9:133992897..133992908, + |
| 6.73e-48 | FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_a7042ade037395a2bf109456983586a6 | p12@PARP12 |
| 6.73e-48 | FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_a7042ade037395a2bf109456983586a6 | p12@PARP12 |
| 2.21e-46 | FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_4b71b2839f6bb5f7ca86e9210da5e8d2 | p@chr1:22264210..22264241, + |
| 2.21e-46 | FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_4b71b2839f6bb5f7ca86e9210da5e8d2 | p@chr1:22264210..22264241, + |
| 2.9e-46 | FFCP PHASE1:Hg19::chr1:16076084..16076098,-#_696edded2742ac6b59fab79457320680 | p2@ENST00000418525 |
| 2.9e-46 | FFCP PHASE2:Hg19::chr1:16076084..16076098,-#_696edded2742ac6b59fab79457320680 | p2@ENST00000418525 |
| 8.1e-46 | FFCP PHASE2:Hg19::chr20:62670299..62670342,-#_18fa99238dda2c2b8ce63972e2360952 | p8@ZNF512B |
| 8.1e-46 | FFCP PHASE1:Hg19::chr20:62670299..62670342,-#_18fa99238dda2c2b8ce63972e2360952 | p8@ZNF512B |
| 2.28e-45 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_0d9af40b5bdeffa84b4877078775679e | p@chr18:33047157..33047168, - |
| 2.28e-45 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_0d9af40b5bdeffa84b4877078775679e | p@chr18:33047157..33047168, - |
| 4.83e-44 | FFCP PHASE1:Hg19::chr21:39869867..39869880,-#_ed080d59aee4bc4594d2173ee1982fb9 | p@chr21:39869867..39869880, - |
| 4.83e-44 | FFCP PHASE2:Hg19::chr21:39869867..39869880,-#_ed080d59aee4bc4594d2173ee1982fb9 | p@chr21:39869867..39869880, - |
| 2.25e-43 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_f60c1209a9057ee1a69bc636dc7e2897 | p1@MIR216A |
| 2.25e-43 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_f60c1209a9057ee1a69bc636dc7e2897 | p1@MIR216A |
| 9.47e-42 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_f5a58f63defedf09e09b4ce94e907192 | p6@WDFY4 |
| 9.47e-42 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_f5a58f63defedf09e09b4ce94e907192 | p6@WDFY4 |
| 4.61e-41 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_695b7f4a58d43aaa4652c8dd46e0d4a5 | p2@BMX |
| 4.61e-41 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_695b7f4a58d43aaa4652c8dd46e0d4a5 | p2@BMX |
| 1.77e-40 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_b173b05234e2d3b9d55de4051198da4e | p@chr11:124761247..124761258, - |
| 1.77e-40 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_b173b05234e2d3b9d55de4051198da4e | p@chr11:124761247..124761258, - |
| 1.97e-39 | FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_fe4ae5418b531ebbd2b1f13c4f5b2781 | p@chr6:148664333..148664338, - |
| 1.97e-39 | FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_fe4ae5418b531ebbd2b1f13c4f5b2781 | p@chr6:148664333..148664338, - |
| 2.05e-39 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_ba5be0f5bf1db5d1ea9a7baa4872a2cd | p1@ENST00000513158 |
| 2.05e-39 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_ba5be0f5bf1db5d1ea9a7baa4872a2cd | p1@ENST00000513158 |
| 2.93e-39 | FFCP PHASE2:Hg19::chr7:81662303..81662321,-#_38ab3a88f8a423b4fca15af4613567f4 | p8@CACNA2D1 |
| 2.93e-39 | FFCP PHASE1:Hg19::chr7:81662303..81662321,-#_38ab3a88f8a423b4fca15af4613567f4 | p8@CACNA2D1 |
| 3.04e-39 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_8f2eb0f1dc42dcdcd35a1109dcef5d52 | p@chr9:139543390..139543404, + |
| 3.04e-39 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_8f2eb0f1dc42dcdcd35a1109dcef5d52 | p@chr9:139543390..139543404, + |
| 4.03e-39 | FFCP PHASE2:Hg19::chr13:32838839..32838850,+#_089331c5cc9c18e4911bc48ae829f15f | p20@FRY |
| 4.03e-39 | FFCP PHASE1:Hg19::chr13:32838839..32838850,+#_089331c5cc9c18e4911bc48ae829f15f | p20@FRY |
| 4.23e-39 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_e43e818e628605eb873287748fe45590 | p@chr12:105863636..105863650, + |
| 4.23e-39 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_e43e818e628605eb873287748fe45590 | p@chr12:105863636..105863650, + |
| 1.35e-38 | FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_e3790b6944933a846bcbe050395e1b0e | p15@RAI14 |
| 1.35e-38 | FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_e3790b6944933a846bcbe050395e1b0e | p15@RAI14 |
| 2.92e-38 | FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_886f67e48a99c4f1b5b078e8a04a3d51 | p1@ENST00000418525 |
| 2.92e-38 | FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_886f67e48a99c4f1b5b078e8a04a3d51 | p1@ENST00000418525 |
| 3.65e-38 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_25eeef027a4770cfec667d62f16ac35b | p@chrX:71299684..71299699, + |
| 3.65e-38 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_25eeef027a4770cfec667d62f16ac35b | p@chrX:71299684..71299699, + |
| 5.48e-38 | FFCP PHASE2:Hg19::chr5:141337703..141337712,-#_7c2a092219096efe4f41c3298211403d | p4@PCDH12 |
| 5.48e-38 | FFCP PHASE1:Hg19::chr5:141337703..141337712,-#_7c2a092219096efe4f41c3298211403d | p4@PCDH12 |
| 6.38e-38 | FFCP PHASE1:Hg19::chr6:112538096..112538101,+#_743eb7d3e9112b057bb6db055bd2c291 | p@chr6:112538096..112538101, + |
| 6.38e-38 | FFCP PHASE2:Hg19::chr6:112538096..112538101,+#_743eb7d3e9112b057bb6db055bd2c291 | p@chr6:112538096..112538101, + |
| 7.3e-38 | FFCP PHASE2:Hg19::chr16:81644068..81644075,+#_81e295d6c7ed6fe004101812e2292013 | p14@CMIP |
| 7.3e-38 | FFCP PHASE1:Hg19::chr16:81644068..81644075,+#_81e295d6c7ed6fe004101812e2292013 | p14@CMIP |
| 1.72e-37 | FFCP PHASE2:Hg19::chr9:139937688..139937698,-#_25777518032a1565a2589775a16081c9 | p15@NPDC1 |
| 1.72e-37 | FFCP PHASE1:Hg19::chr9:139937688..139937698,-#_25777518032a1565a2589775a16081c9 | p15@NPDC1 |
| 1.85e-37 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_7a3473fb981a2b6ea44dd5daab6c4abf | p11@UIMC1 |
| 1.85e-37 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_7a3473fb981a2b6ea44dd5daab6c4abf | p11@UIMC1 |
| 2.95e-37 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_90443d3c99c011145cbd74b8febacb20 | p6@CLEC14A |
| 2.95e-37 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_90443d3c99c011145cbd74b8febacb20 | p6@CLEC14A |
| 3.21e-37 | FFCP PHASE2:Hg19::chr16:66420782..66420796,+#_342aacb5f9db9733a5201c6b534e9cdf | p@chr16:66420782..66420796, + |
| 3.21e-37 | FFCP PHASE1:Hg19::chr16:66420782..66420796,+#_342aacb5f9db9733a5201c6b534e9cdf | p@chr16:66420782..66420796, + |
| 1.32e-36 | FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_201edd33ea5c8d2c0dc2c5a6d7e96ecd | p@chr9:139541134..139541139, + |
| 1.32e-36 | FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_201edd33ea5c8d2c0dc2c5a6d7e96ecd | p@chr9:139541134..139541139, + |
| 2.37e-36 | FFCP PHASE2:Hg19::chr7:106720036..106720059,-#_5701381692d0b1cdf5e2b78adf9eef2d | p@chr7:106720036..106720059, - |
| 2.37e-36 | FFCP PHASE1:Hg19::chr7:106720036..106720059,-#_5701381692d0b1cdf5e2b78adf9eef2d | p@chr7:106720036..106720059, - |
| 2.45e-36 | FFCP PHASE1:Hg19::chr5:141337686..141337697,-#_643002699def6706a88d5c0112f9baf0 | p2@PCDH12 |
| 2.45e-36 | FFCP PHASE2:Hg19::chr5:141337686..141337697,-#_643002699def6706a88d5c0112f9baf0 | p2@PCDH12 |
| 2.55e-36 | FFCP PHASE2:Hg19::chr4:5035083..5035101,-#_346d655d6325bc49c97c51148bcc4c76 | p@chr4:5035083..5035101, - |
| 2.55e-36 | FFCP PHASE1:Hg19::chr4:5035083..5035101,-#_346d655d6325bc49c97c51148bcc4c76 | p@chr4:5035083..5035101, - |
| 8.22e-36 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_d6e9dba65c36b503ed860ea0163f9554 | p@chr6:3753188..3753192, - |
| 8.22e-36 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_d6e9dba65c36b503ed860ea0163f9554 | p@chr6:3753188..3753192, - |
| 8.78e-36 | FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_68558da65185c009287fe7145c73e3a2 | p@chr12:96830523..96830532, + |
| 8.78e-36 | FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_68558da65185c009287fe7145c73e3a2 | p@chr12:96830523..96830532, + |
| 1.38e-35 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_037c8322b2b88fe35dceae01c5e5106e | p12@KSR2 |
| 1.38e-35 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_037c8322b2b88fe35dceae01c5e5106e | p12@KSR2 |
| 2.15e-35 | FFCP PHASE1:Hg19::chr12:52300746..52300751,+#_408bfa5812e78898421dc735f7eb4258 | p10@ACVRL1 |
| 2.15e-35 | FFCP PHASE2:Hg19::chr12:52300746..52300751,+#_408bfa5812e78898421dc735f7eb4258 | p10@ACVRL1 |
| 3.05e-35 | FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_b5bae951115eda280da3d0fa47342dd9 | p@chr6:78171746..78171769, + |
| 3.05e-35 | FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_b5bae951115eda280da3d0fa47342dd9 | p@chr6:78171746..78171769, + |
| 5.92e-35 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_f41f15a9f08efd3a2143b10a804b6029 | p5@CLEC14A |
| 5.92e-35 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_f41f15a9f08efd3a2143b10a804b6029 | p5@CLEC14A |
| 8.27e-35 | FFCP PHASE1:Hg19::chr11:124764093..124764097,-#_9a3db85c02f0f87e3694aa2ad9f7b4e9 | p4@ROBO4 |
| 8.27e-35 | FFCP PHASE2:Hg19::chr11:124764093..124764097,-#_9a3db85c02f0f87e3694aa2ad9f7b4e9 | p4@ROBO4 |
| 1.48e-34 | FFCP PHASE1:Hg19::chrX:107068687..107068703,+#_d8bd36238aca85da466d6fca07934fff | p6@MID2 |
| 1.48e-34 | FFCP PHASE2:Hg19::chrX:107068687..107068703,+#_d8bd36238aca85da466d6fca07934fff | p6@MID2 |
