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{{CL
{{CL
|id=CL:0002543
|alt_id=CL:1000393
|name=vein endothelial cell
|namespace=cell
|def="An endothelial cell that is part of the vein." [GOC:tfm]
|xref=FMA:62104;;KUPO:0001099
|is_a=CL:0000071
|synonym="endothelial cell of vein" EXACT []
|comment=
|comment=
|alt_id=CL:1000393
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-02-28T03:48:11Z
|def="An endothelial cell that is part of the vein." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002543
|is_a=CL:0000071
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=vein endothelial cell
|namespace=FANTOM
|obo_creation_date=2011-02-28T03:48:11Z
|part_of=UBERON:0001638
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="endothelial cell of vein" EXACT []
|union_of=
|xref=FMA:62104;;KUPO:0001099
}}
}}

Latest revision as of 16:43, 12 September 2014

Name:vein endothelial cell
Namespace:FANTOM
Definition:"An endothelial cell that is part of the vein." [GOC:tfm]
Xrefs:
links:

FMA:62104

KUPO:0001099
Synonyms: "endothelial cell of vein" EXACT []
Alt_id: CL:1000393
Created by:tmeehan
Creation date:2011-02-28T03:48:11Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000071(blood vessel endothelial cell)
part_of:UBERON:0001638(vein)



Children


is a:CL:0002618 (endothelial cell of umbilical vein)
derives from:FF:0000052 (human endothelial cell of the vein sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002543 (vein endothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.12e-118FFCP PHASE1:Hg19::chr19:7861475..7861491,+#_68b40d7521a81439c9b9c7e921c9e554p@chr19:7861475..7861491, +
2.12e-118FFCP PHASE2:Hg19::chr19:7861475..7861491,+#_68b40d7521a81439c9b9c7e921c9e554p@chr19:7861475..7861491, +
1.83e-98FFCP PHASE1:Hg19::chr5:120649811..120649848,+#_4926ae9eead068308ca606e32194682ep@chr5:120649811..120649848, +
1.83e-98FFCP PHASE2:Hg19::chr5:120649811..120649848,+#_4926ae9eead068308ca606e32194682ep@chr5:120649811..120649848, +
1.81e-79FFCP PHASE1:Hg19::chr9:35754222..35754237,-#_f2ce3072bd56225d6fe191e051b52c55p3@MSMP
1.81e-79FFCP PHASE2:Hg19::chr9:35754222..35754237,-#_f2ce3072bd56225d6fe191e051b52c55p3@MSMP
2.38e-73FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_566ed370bdcc4e5f7e912ed0bae98442p@chr9:139563124..139563129, +
2.38e-73FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_566ed370bdcc4e5f7e912ed0bae98442p@chr9:139563124..139563129, +
3.22e-70FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_48e586422f347e1fbbce28b74e96cc4dp7@WDFY4
3.22e-70FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_48e586422f347e1fbbce28b74e96cc4dp7@WDFY4
2.83e-66FFCP PHASE1:Hg19::chr1:78512168..78512171,-#_be6b069dd059a739f4702dfbe9149c99p@chr1:78512168..78512171, -
2.83e-66FFCP PHASE2:Hg19::chr1:78512168..78512171,-#_be6b069dd059a739f4702dfbe9149c99p@chr1:78512168..78512171, -
6.06e-66FFCP PHASE2:Hg19::chr10:94590997..94591006,+#_6b87f7291a3e322196aa8ea7ca30c6e1p11@EXOC6
6.06e-66FFCP PHASE1:Hg19::chr10:94590997..94591006,+#_6b87f7291a3e322196aa8ea7ca30c6e1p11@EXOC6
3.69e-60FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_e1c1849cf760659f1c51fe49f03092afp6@WDFY4
3.69e-60FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_e1c1849cf760659f1c51fe49f03092afp6@WDFY4
2.07e-59FFCP PHASE1:Hg19::chr1:61415107..61415136,-#_fe7343b8c6f1f982ae7a196d4ca9d693p@chr1:61415107..61415136, -
2.07e-59FFCP PHASE2:Hg19::chr1:61415107..61415136,-#_fe7343b8c6f1f982ae7a196d4ca9d693p@chr1:61415107..61415136, -
4.19e-59FFCP PHASE1:Hg19::chr12:10794718..10794741,+#_9f443794f103b06b8535b9c1442a465ep@chr12:10794718..10794741, +
4.19e-59FFCP PHASE2:Hg19::chr12:10794718..10794741,+#_9f443794f103b06b8535b9c1442a465ep@chr12:10794718..10794741, +
9.88e-59FFCP PHASE1:Hg19::chr10:82173423..82173439,+#_819f689a2c0bdb11e0c3dabc4c4cc759p5@FAM213A
9.88e-59FFCP PHASE2:Hg19::chr10:82173423..82173439,+#_819f689a2c0bdb11e0c3dabc4c4cc759p5@FAM213A
2.25e-57FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_3916505c1a9aaf0008e1b8d75cf3f851p5@PARP12
2.25e-57FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_3916505c1a9aaf0008e1b8d75cf3f851p5@PARP12
1.16e-56FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_f34d026e7854b4f2bf19d292f05264eap11@MANSC1
1.16e-56FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_f34d026e7854b4f2bf19d292f05264eap11@MANSC1
1.88e-56FFCP PHASE1:Hg19::chr9:139559213..139559241,+#_fb75637bde384da353d065310dddea48p5@EGFL7
1.88e-56FFCP PHASE2:Hg19::chr9:139559213..139559241,+#_fb75637bde384da353d065310dddea48p5@EGFL7
1.58e-53FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_6d318e0913728ee81153e3484fd60e97p@chr1:172926077..172926120, -
1.58e-53FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_6d318e0913728ee81153e3484fd60e97p@chr1:172926077..172926120, -
2.7e-53FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_a0751919811309099c4779af31b43f36p@chr6:11607864..11607875, +
2.7e-53FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_a0751919811309099c4779af31b43f36p@chr6:11607864..11607875, +
7.09e-53FFCP PHASE1:Hg19::chr7:106720036..106720059,-#_c40c323e92caab00ef55ab7ace7abdb8p@chr7:106720036..106720059, -
7.09e-53FFCP PHASE2:Hg19::chr7:106720036..106720059,-#_c40c323e92caab00ef55ab7ace7abdb8p@chr7:106720036..106720059, -
3.5e-52FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_05ac76ede21d31269eea40cb4f2f32d7p@chr6:78171774..78171792, +
3.5e-52FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_05ac76ede21d31269eea40cb4f2f32d7p@chr6:78171774..78171792, +
1.91e-50FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_6bfac4487c1d58a473a6405ac6db5213p12@KSR2
1.91e-50FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_6bfac4487c1d58a473a6405ac6db5213p12@KSR2
3.84e-50FFCP PHASE1:Hg19::chr10:94590950..94590955,+#_4a6f48aae7a8d0392ec5f6545ad38495p13@EXOC6
3.84e-50FFCP PHASE1:Hg19::chr1:78510648..78510661,+#_4a6f48aae7a8d0392ec5f6545ad38495p7@GIPC2
3.84e-50FFCP PHASE2:Hg19::chr1:78510648..78510661,+#_4a6f48aae7a8d0392ec5f6545ad38495p7@GIPC2
3.84e-50FFCP PHASE2:Hg19::chr10:94590950..94590955,+#_4a6f48aae7a8d0392ec5f6545ad38495p13@EXOC6
5.29e-50FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_5b5c1047850335882fbc0c67ebf4ea8bp@chr3:43538305..43538325, -
5.29e-50FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_5b5c1047850335882fbc0c67ebf4ea8bp@chr3:43538305..43538325, -
8.88e-50FFCP PHASE1:Hg19::chr2:72789511..72789554,-#_c7d8f2fad76608d0b2e9060784a85796p@chr2:72789511..72789554, -
8.88e-50FFCP PHASE2:Hg19::chr2:72789511..72789554,-#_c7d8f2fad76608d0b2e9060784a85796p@chr2:72789511..72789554, -
1.05e-49FFCP PHASE2:Hg19::chr12:105962745..105962748,+#_b2f53e8c50b7c92c1998dc9de48ca0a9p@chr12:105962745..105962748, +
1.05e-49FFCP PHASE1:Hg19::chr12:105962745..105962748,+#_b2f53e8c50b7c92c1998dc9de48ca0a9p@chr12:105962745..105962748, +
2.55e-48FFCP PHASE2:Hg19::chr1:186946611..186946622,+#_1390b5942da575566c080147021cbce8p@chr1:186946611..186946622, +
2.55e-48FFCP PHASE1:Hg19::chr1:186946611..186946622,+#_1390b5942da575566c080147021cbce8p@chr1:186946611..186946622, +
3.67e-48FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_aa70c50cce9d488d10853b2cc7fc55e6p12@PARP12
3.67e-48FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_aa70c50cce9d488d10853b2cc7fc55e6p12@PARP12
8.6e-47FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_de79d204e25d7d59369008f4dd176620p@chr1:22264210..22264241, +
8.6e-47FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_de79d204e25d7d59369008f4dd176620p@chr1:22264210..22264241, +
1.74e-46FFCP PHASE1:Hg19::chr18:22932208..22932219,-#_12d7845673400296f19e56898403e1f3p6@ZNF521
1.74e-46FFCP PHASE2:Hg19::chr18:22932208..22932219,-#_12d7845673400296f19e56898403e1f3p6@ZNF521
6.39e-45FFCP PHASE1:Hg19::chr5:71853090..71853107,+#_6150a25541135694f91132b141a7bb3dp@chr5:71853090..71853107, +
6.39e-45FFCP PHASE2:Hg19::chr5:71853090..71853107,+#_6150a25541135694f91132b141a7bb3dp@chr5:71853090..71853107, +
6.89e-45FFCP PHASE1:Hg19::chr22:50331023..50331030,+#_541d999f03c84a858a325944e0846a90p@chr22:50331023..50331030, +
6.89e-45FFCP PHASE2:Hg19::chr22:50331023..50331030,+#_541d999f03c84a858a325944e0846a90p@chr22:50331023..50331030, +
1.22e-44FFCP PHASE1:Hg19::chr4:162563953..162563962,-#_e4e91b336824c8d847f2ccb3c6793944p@chr4:162563953..162563962, -
1.22e-44FFCP PHASE2:Hg19::chr4:162563953..162563962,-#_e4e91b336824c8d847f2ccb3c6793944p@chr4:162563953..162563962, -
1.98e-44FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_92acff645ecc3686b52c91f0919eb459p@chr10:99655692..99655725, -
1.98e-44FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_92acff645ecc3686b52c91f0919eb459p@chr10:99655692..99655725, -
3.19e-44FFCP PHASE1:Hg19::chr12:105863627..105863633,+#_a9c42d04bacf4c6437bf830e79b9e988p@chr12:105863627..105863633, +
3.19e-44FFCP PHASE2:Hg19::chr12:105863627..105863633,+#_a9c42d04bacf4c6437bf830e79b9e988p@chr12:105863627..105863633, +
1.95e-43FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_915105706b6ea281566a238d631612e1p1@MIR216A
1.95e-43FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_915105706b6ea281566a238d631612e1p1@MIR216A
4.39e-43FFCP PHASE1:Hg19::chr21:39869867..39869880,-#_6850e4be54175ba7b0a86248a0f5f955p@chr21:39869867..39869880, -
4.39e-43FFCP PHASE2:Hg19::chr21:39869867..39869880,-#_6850e4be54175ba7b0a86248a0f5f955p@chr21:39869867..39869880, -
6.48e-43FFCP PHASE1:Hg19::chr1:78511901..78511912,+#_4e5b1e9b9f166532111dffaa7ade4268p6@GIPC2
6.48e-43FFCP PHASE2:Hg19::chr1:78511901..78511912,+#_4e5b1e9b9f166532111dffaa7ade4268p6@GIPC2
8.63e-43FFCP PHASE2:Hg19::chr1:186946659..186946664,+#_8bcb71969a14726f3dd7bd8608527059p@chr1:186946659..186946664, +
8.63e-43FFCP PHASE1:Hg19::chr1:186946659..186946664,+#_8bcb71969a14726f3dd7bd8608527059p@chr1:186946659..186946664, +
1.33e-42FFCP PHASE1:Hg19::chr11:59875891..59875903,-#_546d2234516ead8fe3d9ac29c7b46a21p@chr11:59875891..59875903, -
1.33e-42FFCP PHASE2:Hg19::chr11:59875891..59875903,-#_546d2234516ead8fe3d9ac29c7b46a21p@chr11:59875891..59875903, -
2.84e-42FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_baba21901bb36008eaef18a9945fd29fp10@PTPRB
2.84e-42FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_baba21901bb36008eaef18a9945fd29fp10@PTPRB
2.9e-42FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_c5e1a1ba681f1bf322582206090729d0p@chr12:105863705..105863718, +
2.9e-42FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_c5e1a1ba681f1bf322582206090729d0p@chr12:105863705..105863718, +
3.05e-42FFCP PHASE1:Hg19::chr19:47220191..47220198,-#_25f91ad17928400d2debdf4ee9e50bc4p14@PRKD2
3.05e-42FFCP PHASE2:Hg19::chr19:47220191..47220198,-#_25f91ad17928400d2debdf4ee9e50bc4p14@PRKD2
4.11e-41FFCP PHASE2:Hg19::chr6:142622846..142622853,+#_d36f32ee0e07e9a6be7d522cd2965ef6p12@GPR126
4.11e-41FFCP PHASE1:Hg19::chr6:142622846..142622853,+#_d36f32ee0e07e9a6be7d522cd2965ef6p12@GPR126
1.15e-40FFCP PHASE1:Hg19::chr12:6232421..6232447,-#_f641101bc1c9c820ea6e962bd24191edp8@VWF
1.15e-40FFCP PHASE2:Hg19::chr12:6232421..6232447,-#_f641101bc1c9c820ea6e962bd24191edp8@VWF
2.65e-40FFCP PHASE1:Hg19::chr13:32838839..32838850,+#_21a84c90b53d171160be20d369a306cap20@FRY
2.65e-40FFCP PHASE2:Hg19::chr13:32838839..32838850,+#_21a84c90b53d171160be20d369a306cap20@FRY
3.19e-40FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_eb31bf572051d78f8fb185efb804779fp1@ENST00000513158
3.19e-40FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_eb31bf572051d78f8fb185efb804779fp1@ENST00000513158
7.09e-40FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_c2fe9e09d035f64a57c0a5614d090375p@chr12:105863636..105863650, +
7.09e-40FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_c2fe9e09d035f64a57c0a5614d090375p@chr12:105863636..105863650, +
8.16e-40FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_8fe761170b1629085388acfc012cd763p@chr18:33046982..33046991, -
8.16e-40FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_8fe761170b1629085388acfc012cd763p@chr18:33046982..33046991, -
5.15e-39FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_31d43c0bf6650bb7bc7df4b7a5c032bcp@chrX:71299684..71299699, +
5.15e-39FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_31d43c0bf6650bb7bc7df4b7a5c032bcp@chrX:71299684..71299699, +
7.63e-39FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_e5464143bd00d1470b22281abd36a92fp@chr9:139543390..139543404, +
7.63e-39FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_e5464143bd00d1470b22281abd36a92fp@chr9:139543390..139543404, +
8.23e-39FFCP PHASE1:Hg19::chr1:2485709..2485728,+#_4612e5e20510ae25e0fc3bf14933a8a3p@chr1:2485709..2485728, +
8.23e-39FFCP PHASE2:Hg19::chr1:2485709..2485728,+#_4612e5e20510ae25e0fc3bf14933a8a3p@chr1:2485709..2485728, +

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