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{{CL
{{CL
|id=CL:0002521
|alt_id=
|name=subcutaneous fat cell
|namespace=cell
|def="A fat cell that is part of subcutaneous adipose tissue." [GOC:tfm]
|xref=
|is_a=CL:0000136
|synonym="subcutaneous adipocyte" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-02-21T02:51:22Z
|def="A fat cell that is part of subcutaneous adipose tissue." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002521
|is_a=CL:0000136
|is_obsolete=
|located_in=
|located_in=
|name=subcutaneous fat cell
|namespace=FANTOM
|obo_creation_date=2011-02-21T02:51:22Z
|part_of=UBERON:0002190
|part_of=UBERON:0002190
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym="subcutaneous adipocyte" EXACT []
|union_of=
|xref=
}}
}}

Latest revision as of 16:43, 12 September 2014

Name:subcutaneous fat cell
Namespace:FANTOM
Definition:"A fat cell that is part of subcutaneous adipose tissue." [GOC:tfm]
Synonyms: "subcutaneous adipocyte" EXACT []
Created by:tmeehan
Creation date:2011-02-21T02:51:22Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000136(fat cell)
part_of:UBERON:0002190(subcutaneous adipose tissue)



Children


derives from:FF:0000011 (human subcutaneous adipocyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002521 (subcutaneous fat cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.17e-98FFCP PHASE1:Hg19::chr17:17495407..17495419,-#_09753e6aa1e3eb641c90f8c0ff29d1f6p17@PEMT
2.17e-98FFCP PHASE2:Hg19::chr17:17495407..17495419,-#_09753e6aa1e3eb641c90f8c0ff29d1f6p17@PEMT
9.61e-85FFCP PHASE1:Hg19::chr11:111895969..111895977,+#_54c1f849add2f6b189707a9445cbe609p8@DLAT
9.61e-85FFCP PHASE2:Hg19::chr11:111895969..111895977,+#_54c1f849add2f6b189707a9445cbe609p8@DLAT
1.28e-84FFCP PHASE2:Hg19::chr3:12190006..12190011,+#_e358f2b8fbe42a4b17cb806b4c8c1488p19@SYN2
1.28e-84FFCP PHASE1:Hg19::chr3:12190006..12190011,+#_e358f2b8fbe42a4b17cb806b4c8c1488p19@SYN2
1.29e-74FFCP PHASE2:Hg19::chr11:823806..823819,+#_d7d5a09c51178d241943c7ca5159b70cp19@PNPLA2
1.29e-74FFCP PHASE1:Hg19::chr11:823806..823819,+#_d7d5a09c51178d241943c7ca5159b70cp19@PNPLA2
5.84e-74FFCP PHASE2:Hg19::chr11:35232781..35232791,+#_74f7104734fa609bd9978f2436a8be36p1@U94903
5.84e-74FFCP PHASE1:Hg19::chr11:35232781..35232791,+#_74f7104734fa609bd9978f2436a8be36p1@U94903
1.54e-66FFCP PHASE2:Hg19::chr12:50503990..50504003,+#_9377de4aa04e95a6dac06c5b853779a4p@chr12:50503990..50504003, +
1.54e-66FFCP PHASE1:Hg19::chr12:50503990..50504003,+#_9377de4aa04e95a6dac06c5b853779a4p@chr12:50503990..50504003, +
2.39e-66FFCP PHASE2:Hg19::chr14:66872597..66872598,+#_869bcb19b950e3fb9c51fb1586c8abafp@chr14:66872597..66872598, +
2.39e-66FFCP PHASE2:Hg19::chr12:94286185..94286186,+#_869bcb19b950e3fb9c51fb1586c8abafp@chr12:94286185..94286186, +
2.39e-66FFCP PHASE1:Hg19::chr14:66872597..66872598,+#_869bcb19b950e3fb9c51fb1586c8abafp@chr14:66872597..66872598, +
2.39e-66FFCP PHASE1:Hg19::chr12:94286185..94286186,+#_869bcb19b950e3fb9c51fb1586c8abafp@chr12:94286185..94286186, +
2.4e-66FFCP PHASE2:Hg19::chr12:109593033..109593052,+#_9b8b5c8bbb48c67d2689d0900cfe5721p@chr12:109593033..109593052, +
2.4e-66FFCP PHASE1:Hg19::chr12:109593033..109593052,+#_9b8b5c8bbb48c67d2689d0900cfe5721p@chr12:109593033..109593052, +
4.68e-66FFCP PHASE2:Hg19::chr2:65356996..65357005,+#_445c0cf2370add73117a4cb5581d3165p@chr2:65356996..65357005, +
4.68e-66FFCP PHASE1:Hg19::chr3:52269260..52269269,-#_445c0cf2370add73117a4cb5581d3165p@chr3:52269260..52269269, -
4.68e-66FFCP PHASE1:Hg19::chr2:65356996..65357005,+#_445c0cf2370add73117a4cb5581d3165p@chr2:65356996..65357005, +
4.68e-66FFCP PHASE2:Hg19::chr3:52269260..52269269,-#_445c0cf2370add73117a4cb5581d3165p@chr3:52269260..52269269, -
6.53e-66FFCP PHASE2:Hg19::chr12:16758109..16758118,-#_0bb2682227ea9b1aeef6ac08eef8eb4ep37@LMO3
6.53e-66FFCP PHASE1:Hg19::chr12:16758109..16758118,-#_0bb2682227ea9b1aeef6ac08eef8eb4ep37@LMO3
2.98e-60FFCP PHASE2:Hg19::chr17:80382262..80382282,+#_da0c41ee4870104afb5e51d188875922p@chr17:80382262..80382282, +
2.98e-60FFCP PHASE1:Hg19::chr17:80382262..80382282,+#_da0c41ee4870104afb5e51d188875922p@chr17:80382262..80382282, +
1.68e-53FFCP PHASE1:Hg19::chr5:180258514..180258515,-#_2114140a6e0173284557590957c6ac36p15@uc003mmj.1
1.68e-53FFCP PHASE2:Hg19::chr5:180258514..180258515,-#_2114140a6e0173284557590957c6ac36p15@uc003mmj.1
2.19e-53FFCP PHASE2:Hg19::chr11:111896693..111896701,+#_6af92d3fd889a364b00c627c30390fe4p@chr11:111896693..111896701, +
2.19e-53FFCP PHASE1:Hg19::chr11:111896693..111896701,+#_6af92d3fd889a364b00c627c30390fe4p@chr11:111896693..111896701, +
1.35e-50FFCP PHASE1:Hg19::chr3:52821997..52822012,+#_c90ea7e38d29891997a7736abbbfe6b1p3@ITIH1
1.35e-50FFCP PHASE2:Hg19::chr3:52821997..52822012,+#_c90ea7e38d29891997a7736abbbfe6b1p3@ITIH1
3.13e-50FFCP PHASE2:Hg19::chr3:12190041..12190062,+#_2e029934c26a696eee043d2e58086e5ep6@SYN2
3.13e-50FFCP PHASE1:Hg19::chr3:12190041..12190062,+#_2e029934c26a696eee043d2e58086e5ep6@SYN2
7.56e-47FFCP PHASE1:Hg19::chr11:63273651..63273660,+#_2e30ada5dc9d86957b827c97d915515ap7@LGALS12
7.56e-47FFCP PHASE2:Hg19::chr11:63273651..63273660,+#_2e30ada5dc9d86957b827c97d915515ap7@LGALS12
1.41e-46FFCP PHASE2:Hg19::chr16:68325453..68325473,+#_d8f629990677aa2d6d3e6954d3cd212bp@chr16:68325453..68325473, +
1.41e-46FFCP PHASE1:Hg19::chr16:68325453..68325473,+#_d8f629990677aa2d6d3e6954d3cd212bp@chr16:68325453..68325473, +
5.0e-45FFCP PHASE1:Hg19::chr17:41004526..41004533,-#_d13e0e773960cef015259d438dbdb582p@chr17:41004526..41004533, -
5.0e-45FFCP PHASE2:Hg19::chr17:41004526..41004533,-#_d13e0e773960cef015259d438dbdb582p@chr17:41004526..41004533, -
6.25e-45FFCP PHASE1:Hg19::chr3:52821979..52821984,+#_7a26ca598ddfa6e730058f17aff27d12p14@ITIH1
6.25e-45FFCP PHASE2:Hg19::chr3:52821979..52821984,+#_7a26ca598ddfa6e730058f17aff27d12p14@ITIH1
7.81e-45FFCP PHASE2:Hg19::chr11:111896671..111896691,+#_72ed22ebb9bc001ff80a1954b12ca894p@chr11:111896671..111896691, +
7.81e-45FFCP PHASE2:Hg19::chr10:113915737..113915754,-#_72ed22ebb9bc001ff80a1954b12ca894p@chr10:113915737..113915754, -
7.81e-45FFCP PHASE1:Hg19::chr11:111896671..111896691,+#_72ed22ebb9bc001ff80a1954b12ca894p@chr11:111896671..111896691, +
7.81e-45FFCP PHASE1:Hg19::chr10:113915737..113915754,-#_72ed22ebb9bc001ff80a1954b12ca894p@chr10:113915737..113915754, -
7.81e-45FFCP PHASE1:Hg19::chr11:63273968..63273973,+#_72ed22ebb9bc001ff80a1954b12ca894p12@LGALS12
7.81e-45FFCP PHASE2:Hg19::chr11:63273968..63273973,+#_72ed22ebb9bc001ff80a1954b12ca894p12@LGALS12
1.22e-44FFCP PHASE2:Hg19::chr15:83330983..83330997,-#_cbbfcb7a5ef44d5a4bd8d3e798796ebap10@AP3B2
1.22e-44FFCP PHASE1:Hg19::chr15:83330983..83330997,-#_cbbfcb7a5ef44d5a4bd8d3e798796ebap10@AP3B2
1.53e-44FFCP PHASE2:Hg19::chr5:150138790..150138796,-#_8f383a74310d58b851e2c73d5b5230fbp18@DCTN4
1.53e-44FFCP PHASE1:Hg19::chr17:41003146..41003150,+#_8f383a74310d58b851e2c73d5b5230fbp6@AOC3
1.53e-44FFCP PHASE1:Hg19::chr5:150138790..150138796,-#_8f383a74310d58b851e2c73d5b5230fbp18@DCTN4
1.53e-44FFCP PHASE2:Hg19::chr17:41003146..41003150,+#_8f383a74310d58b851e2c73d5b5230fbp6@AOC3
2.38e-44FFCP PHASE2:Hg19::chr8:27023434..27023437,-#_87f609887abed71a3a5be7936bbd3daap@chr8:27023434..27023437, -
2.38e-44FFCP PHASE1:Hg19::chr8:27023434..27023437,-#_87f609887abed71a3a5be7936bbd3daap@chr8:27023434..27023437, -
5.06e-41FFCP PHASE1:Hg19::chr5:76435093..76435109,+#_1610c637f03fba1002faa3e85609a000p1@ENST00000511547, p1@ENST00000515356
5.06e-41FFCP PHASE2:Hg19::chr5:76435093..76435109,+#_1610c637f03fba1002faa3e85609a000p1@ENST00000511547, p1@ENST00000515356
1.96e-40FFCP PHASE1:Hg19::chr3:9911748..9911751,-#_37ff0c6348cc7f3202f2f2e805a5272bp@chr3:9911748..9911751, -
1.96e-40FFCP PHASE2:Hg19::chr3:9911748..9911751,-#_37ff0c6348cc7f3202f2f2e805a5272bp@chr3:9911748..9911751, -
3.35e-40FFCP PHASE1:Hg19::chr3:186575301..186575315,+#_47281478b1ce87d5b03fafb5e8599c84p@chr3:186575301..186575315, +
3.35e-40FFCP PHASE2:Hg19::chr3:186575301..186575315,+#_47281478b1ce87d5b03fafb5e8599c84p@chr3:186575301..186575315, +
3.83e-40FFCP PHASE2:Hg19::chr7:155044107..155044121,-#_d3804450c4457748d59c0aac4b470a99p@chr7:155044107..155044121, -
3.83e-40FFCP PHASE1:Hg19::chr7:155044107..155044121,-#_d3804450c4457748d59c0aac4b470a99p@chr7:155044107..155044121, -
1.01e-38FFCP PHASE2:Hg19::chrX:151999438..151999444,-#_11a8da8cbabf26d50ac8b109a92d4219p3@CETN2
1.01e-38FFCP PHASE1:Hg19::chrX:151999438..151999444,-#_11a8da8cbabf26d50ac8b109a92d4219p3@CETN2
1.23e-38FFCP PHASE1:Hg19::chr1:109939715..109939728,+#_479603bc970425c0468106c1dcf11204p@chr1:109939715..109939728, +
1.23e-38FFCP PHASE2:Hg19::chr1:109939715..109939728,+#_479603bc970425c0468106c1dcf11204p@chr1:109939715..109939728, +
1.43e-38FFCP PHASE2:Hg19::chr3:52822026..52822045,+#_cd7b000c13cc54b814046119b9f89cbcp2@ITIH1
1.43e-38FFCP PHASE1:Hg19::chr3:52822026..52822045,+#_cd7b000c13cc54b814046119b9f89cbcp2@ITIH1
1.49e-38FFCP PHASE1:Hg19::chr11:77775063..77775072,+#_af9dbd2fbcabe8e2381baa03b736f62ap4@THRSP
1.49e-38FFCP PHASE2:Hg19::chr11:77775063..77775072,+#_af9dbd2fbcabe8e2381baa03b736f62ap4@THRSP
1.49e-38FFCP PHASE2:Hg19::chr19:4512807..4512811,-#_af9dbd2fbcabe8e2381baa03b736f62ap2@PLIN4
1.49e-38FFCP PHASE2:Hg19::chr1:236205344..236205359,-#_af9dbd2fbcabe8e2381baa03b736f62ap@chr1:236205344..236205359, -
1.49e-38FFCP PHASE1:Hg19::chr1:236205344..236205359,-#_af9dbd2fbcabe8e2381baa03b736f62ap@chr1:236205344..236205359, -
1.49e-38FFCP PHASE1:Hg19::chr19:4512807..4512811,-#_af9dbd2fbcabe8e2381baa03b736f62ap2@PLIN4
1.8e-38FFCP PHASE1:Hg19::chr13:36706070..36706078,-#_14b98608a6363841cc4cfa0d24bb679fp@chr13:36706070..36706078, -
1.8e-38FFCP PHASE2:Hg19::chr13:36706070..36706078,-#_14b98608a6363841cc4cfa0d24bb679fp@chr13:36706070..36706078, -
2.18e-38FFCP PHASE2:Hg19::chr10:53458769..53458785,+#_c4e677c6d263a3827cf1167b305e2e6ap@chr10:53458769..53458785, +
2.18e-38FFCP PHASE1:Hg19::chr10:53458769..53458785,+#_c4e677c6d263a3827cf1167b305e2e6ap@chr10:53458769..53458785, +
1.58e-37FFCP PHASE1:Hg19::chr9:34590839..34590855,-#_85fcfc50b8054f92db14cbc55b5df843p@chr9:34590839..34590855, -
1.58e-37FFCP PHASE2:Hg19::chr9:34590839..34590855,-#_85fcfc50b8054f92db14cbc55b5df843p@chr9:34590839..34590855, -
1.64e-36FFCP PHASE2:Hg19::chr3:9908708..9908727,-#_edc9495ddbb70a98896bba49b4e6bc2cp@chr3:9908708..9908727, -
1.64e-36FFCP PHASE1:Hg19::chr3:9908708..9908727,-#_edc9495ddbb70a98896bba49b4e6bc2cp@chr3:9908708..9908727, -
1.4e-35FFCP PHASE1:Hg19::chr5:150162032..150162062,+#_cc21576f0ed90b9ca1d5f40ed0f86e43p@chr5:150162032..150162062, +
1.4e-35FFCP PHASE2:Hg19::chr5:150162032..150162062,+#_cc21576f0ed90b9ca1d5f40ed0f86e43p@chr5:150162032..150162062, +
1.58e-35FFCP PHASE2:Hg19::chr7:100491869..100491891,-#_2513fd0f4fa98c03e0ecf23798f6f441p5@ACHE
1.58e-35FFCP PHASE2:Hg19::chr11:63256386..63256431,-#_2513fd0f4fa98c03e0ecf23798f6f441p@chr11:63256386..63256431, -
1.58e-35FFCP PHASE1:Hg19::chr11:63256386..63256431,-#_2513fd0f4fa98c03e0ecf23798f6f441p@chr11:63256386..63256431, -
1.58e-35FFCP PHASE1:Hg19::chr7:100491869..100491891,-#_2513fd0f4fa98c03e0ecf23798f6f441p5@ACHE
2.25e-35FFCP PHASE2:Hg19::chr6:53305337..53305366,-#_435553c773f3044c03afef9ed3853a9dp@chr6:53305337..53305366, -
2.25e-35FFCP PHASE1:Hg19::chr6:53305337..53305366,-#_435553c773f3044c03afef9ed3853a9dp@chr6:53305337..53305366, -
3.33e-34FFCP PHASE1:Hg19::chr17:41003393..41003400,+#_7909c54965922f7ff97c1d873ad19131p2@CU690716
3.33e-34FFCP PHASE2:Hg19::chr17:41003393..41003400,+#_7909c54965922f7ff97c1d873ad19131p2@CU690716
3.94e-34FFCP PHASE1:Hg19::chr3:169482605..169482616,-#_6008eb8a8246a80a223c0c6b6884b565p5@TERC
3.94e-34FFCP PHASE2:Hg19::chr3:169482605..169482616,-#_6008eb8a8246a80a223c0c6b6884b565p5@TERC
4.27e-34FFCP PHASE1:Hg19::chr18:69929214..69929219,+#_643d24e93200e92c018f394b79b8608ap@chr18:69929214..69929219, +
4.27e-34FFCP PHASE2:Hg19::chr12:108698640..108698652,-#_643d24e93200e92c018f394b79b8608ap@chr12:108698640..108698652, -
4.27e-34FFCP PHASE1:Hg19::chr12:108698640..108698652,-#_643d24e93200e92c018f394b79b8608ap@chr12:108698640..108698652, -
4.27e-34FFCP PHASE1:Hg19::chr20:42863465..42863472,+#_643d24e93200e92c018f394b79b8608ap@chr20:42863465..42863472, +

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