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{{CL
{{CL
|id=CL:0002491
|alt_id=
|name=auditory epithelial cell
|namespace=cell
|def="A specialized cell involved in auditory sensory perception." [GOC:tfm]
|xref=
|is_a=CL:0000098
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-12-06T03:18:43Z
|def="A specialized cell involved in auditory sensory perception." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002491
|is_a=CL:0000098
|is_obsolete=
|located_in=
|located_in=
|name=auditory epithelial cell
|namespace=FANTOM
|obo_creation_date=2010-12-06T03:18:43Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:43, 12 September 2014

Name:auditory epithelial cell
Namespace:FANTOM
Definition:"A specialized cell involved in auditory sensory perception." [GOC:tfm]
Created by:tmeehan
Creation date:2010-12-06T03:18:43Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000098(sensory epithelial cell)



Children


is a:CL:0000202 (auditory hair cell),CL:0005014 (auditory epithelial support cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002491 (auditory epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_d8421a0cfd1b4c1125356250a3301f5bp2@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_d8421a0cfd1b4c1125356250a3301f5bp2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_d8421a0cfd1b4c1125356250a3301f5bp2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_d8421a0cfd1b4c1125356250a3301f5bp5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_d8421a0cfd1b4c1125356250a3301f5bp4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_d8421a0cfd1b4c1125356250a3301f5bp18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_d8421a0cfd1b4c1125356250a3301f5bp13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_d8421a0cfd1b4c1125356250a3301f5bp12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_d8421a0cfd1b4c1125356250a3301f5bp6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_d8421a0cfd1b4c1125356250a3301f5bp9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_d8421a0cfd1b4c1125356250a3301f5bp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_d8421a0cfd1b4c1125356250a3301f5bp2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_d8421a0cfd1b4c1125356250a3301f5bp12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_d8421a0cfd1b4c1125356250a3301f5bp6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Strc
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_d8421a0cfd1b4c1125356250a3301f5bp2@Plscr5
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_d8421a0cfd1b4c1125356250a3301f5bp2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:43699188..43699216, +
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_d8421a0cfd1b4c1125356250a3301f5bp9@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_d8421a0cfd1b4c1125356250a3301f5bp2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_d8421a0cfd1b4c1125356250a3301f5bp2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_d8421a0cfd1b4c1125356250a3301f5bp2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:97806034..97806061, +

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