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{{CL
{{CL
|id=CL:0002078
|alt_id=
|name=meso-epithelial cell
|namespace=cell
|def="Epithelial cell derived from mesoderm or mesenchyme." [FMA:69076, GOC:tfm, http://63.198.234.228/OpenFMA/Meso-epithelial cell.html]
|xref=FMA:69076
|is_a=CL:0000066;;CL:0002371
|synonym="Epithelial mesenchymal cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-06-29T03:49:14Z
|def="Epithelial cell derived from mesoderm or mesenchyme." [FMA:69076, GOC:tfm, http://63.198.234.228/OpenFMA/Meso-epithelial%20cell.html]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=CL:0000222
|develops_from=CL:0000222
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002078
|is_a=CL:0000066 ;;CL:0002371
|is_obsolete=
|located_in=
|located_in=
|name=meso-epithelial cell
|namespace=FANTOM
|obo_creation_date=2010-06-29T03:49:14Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym="epithelial mesenchymal cell" EXACT []
|union_of=
|xref=FMA:69076
}}
}}

Latest revision as of 16:40, 12 September 2014

Name:meso-epithelial cell
Namespace:FANTOM
Definition:"Epithelial cell derived from mesoderm or mesenchyme." [FMA:69076, GOC:tfm, http://63.198.234.228/OpenFMA/Meso-epithelial%20cell.html]
Xrefs:
links:
FMA:69076
Synonyms: "epithelial mesenchymal cell" EXACT []
Created by:tmeehan
Creation date:2010-06-29T03:49:14Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0002371(somatic cell)
develops_from:CL:0000222(mesodermal cell)



Children


is a:CL:0000115 (endothelial cell),CL:0000214 (synovial cell),CL:0002097 (cortical cell of adrenal gland),CL:0002174 (follicular cell of ovary),CL:0002306 (epithelial cell of proximal tubule)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002078 (meso-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.61e-117FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_b18ed2809f04249b04b64cf18144be92p@chr6:3753188..3753192, -
3.61e-117FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_b18ed2809f04249b04b64cf18144be92p@chr6:3753188..3753192, -
1.28e-111FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_865d75356dd3140b8e78d5dd71764359p1@MIR216A
1.28e-111FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_865d75356dd3140b8e78d5dd71764359p1@MIR216A
9.18e-108FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_31ec0435d4df9b43d30ac002548e2838p@chr11:124761247..124761258, -
9.18e-108FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_31ec0435d4df9b43d30ac002548e2838p@chr11:124761247..124761258, -
1.26e-107FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_0fa26827e4e3da91c6ddc99b9f749fbbp5@ICAM2
1.26e-107FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_0fa26827e4e3da91c6ddc99b9f749fbbp5@ICAM2
5.39e-97FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_e701ccfec059c50762b70cb2c52813b9p@chr16:2220383..2220402, +
5.39e-97FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_e701ccfec059c50762b70cb2c52813b9p@chr16:2220383..2220402, +
2.31e-93FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_0dcb5814a9f62c9eed66384ae880f10ap@chrX:71299684..71299699, +
2.31e-93FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_0dcb5814a9f62c9eed66384ae880f10ap@chrX:71299684..71299699, +
2.59e-93FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_1c67b1e5cfcaedbdc92bda504f8a3985p1@ENST00000513158
2.59e-93FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_1c67b1e5cfcaedbdc92bda504f8a3985p1@ENST00000513158
1.06e-92FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_3252057c82e8ee23d38ef7c6a67159c7p@chr13:32835894..32835907, +
1.06e-92FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_3252057c82e8ee23d38ef7c6a67159c7p@chr13:32835894..32835907, +
4.79e-90FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_8cffd539e7ec0046620d83e2b5947a6ap@chr18:33047117..33047138, -
4.79e-90FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_8cffd539e7ec0046620d83e2b5947a6ap@chr18:33047117..33047138, -
6.7e-90FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_530aaf60263bcfc81b5e0312f8753d4ap@chr18:33046982..33046991, -
6.7e-90FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_530aaf60263bcfc81b5e0312f8753d4ap@chr18:33046982..33046991, -
7.52e-90FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_d2bb636066285299bb17378b8e8f51d3p@chr15:39423060..39423066, +
7.52e-90FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_d2bb636066285299bb17378b8e8f51d3p@chr15:39423060..39423066, +
8.67e-89FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_17df8e21066d2c3bc2faf45ec08e6e38p2@BMX
8.67e-89FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_17df8e21066d2c3bc2faf45ec08e6e38p2@BMX
8.68e-88FFCP PHASE1:Hg19::chr12:105863654..105863682,+#_c12819a03c65dbfd4b6d2b263a0fcf64p@chr12:105863654..105863682, +
8.68e-88FFCP PHASE2:Hg19::chr12:105863654..105863682,+#_c12819a03c65dbfd4b6d2b263a0fcf64p@chr12:105863654..105863682, +
1.94e-87FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_15f3e6257442d9c35d9d2bb7a8cfb708p6@CLEC14A
1.94e-87FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_15f3e6257442d9c35d9d2bb7a8cfb708p6@CLEC14A
8.81e-87FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_d2c3c083703c5c16578c009242905552p5@CLEC14A
8.81e-87FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_d2c3c083703c5c16578c009242905552p5@CLEC14A
2.0e-86FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_1366f614473e3d9a32ea4b971262ef78p@chr18:33047157..33047168, -
2.0e-86FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_1366f614473e3d9a32ea4b971262ef78p@chr18:33047157..33047168, -
3.07e-86FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_ab2327fa167ab3045dff25e12b49065fp@chr18:38831400..38831402, -
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_ab2327fa167ab3045dff25e12b49065fp@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_ab2327fa167ab3045dff25e12b49065fp@chr13:113542610..113542614, +
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_ab2327fa167ab3045dff25e12b49065fp@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_ab2327fa167ab3045dff25e12b49065fp@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_ab2327fa167ab3045dff25e12b49065fp@chr10:93819538..93819549, +
3.07e-86FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_ab2327fa167ab3045dff25e12b49065fp@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_ab2327fa167ab3045dff25e12b49065fp@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_ab2327fa167ab3045dff25e12b49065fp@chr17:24807620..24807650, -
3.07e-86FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_ab2327fa167ab3045dff25e12b49065fp@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_ab2327fa167ab3045dff25e12b49065fp@chr12:86691575..86691580, -
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_ab2327fa167ab3045dff25e12b49065fp@chr17:28107053..28107062, -
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_ab2327fa167ab3045dff25e12b49065fp@chr14:8928284..8928331, +
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_ab2327fa167ab3045dff25e12b49065fp@chr8:3311867..3311873, +
3.07e-86FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_ab2327fa167ab3045dff25e12b49065fp@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_ab2327fa167ab3045dff25e12b49065fp@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_ab2327fa167ab3045dff25e12b49065fp@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_ab2327fa167ab3045dff25e12b49065fp@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_ab2327fa167ab3045dff25e12b49065fp@chr8:127816016..127816021, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_ab2327fa167ab3045dff25e12b49065fp@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_ab2327fa167ab3045dff25e12b49065fp@chr8:87745380..87745385, +
3.07e-86FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_ab2327fa167ab3045dff25e12b49065fp@chr12:85288471..85288502, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_ab2327fa167ab3045dff25e12b49065fp@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_ab2327fa167ab3045dff25e12b49065fp@chrX:166418658..166418683, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_ab2327fa167ab3045dff25e12b49065fp@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_ab2327fa167ab3045dff25e12b49065fp@chr11:88890706..88890745, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_ab2327fa167ab3045dff25e12b49065fp@chr13:96429295..96429302, -
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_ab2327fa167ab3045dff25e12b49065fp4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_ab2327fa167ab3045dff25e12b49065fp8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_ab2327fa167ab3045dff25e12b49065fp@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_ab2327fa167ab3045dff25e12b49065fp@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_ab2327fa167ab3045dff25e12b49065fp@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_ab2327fa167ab3045dff25e12b49065fp@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_ab2327fa167ab3045dff25e12b49065fp@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_ab2327fa167ab3045dff25e12b49065fp@chr15:82209805..82209851, +
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_ab2327fa167ab3045dff25e12b49065fp@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_ab2327fa167ab3045dff25e12b49065fp@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_ab2327fa167ab3045dff25e12b49065fp@chr4:57687477..57687488, +
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_ab2327fa167ab3045dff25e12b49065fp@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_ab2327fa167ab3045dff25e12b49065fp@chr5:75375903..75375931, +
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_ab2327fa167ab3045dff25e12b49065fp@chr12:25364645..25364655, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_ab2327fa167ab3045dff25e12b49065fp4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_ab2327fa167ab3045dff25e12b49065fp@chr19:29573929..29573932, +
3.07e-86FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_ab2327fa167ab3045dff25e12b49065fp@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_ab2327fa167ab3045dff25e12b49065fp@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_ab2327fa167ab3045dff25e12b49065fp@chr16:91441786..91441787, -
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_ab2327fa167ab3045dff25e12b49065fp@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_ab2327fa167ab3045dff25e12b49065fp@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_ab2327fa167ab3045dff25e12b49065fp@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_ab2327fa167ab3045dff25e12b49065fp@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_ab2327fa167ab3045dff25e12b49065fp@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_ab2327fa167ab3045dff25e12b49065fp6@Adamts1
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_ab2327fa167ab3045dff25e12b49065fp@chr8:114123814..114123821, -
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_ab2327fa167ab3045dff25e12b49065fp@chr6:48398664..48398684, -
3.07e-86FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_ab2327fa167ab3045dff25e12b49065fp@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_ab2327fa167ab3045dff25e12b49065fp@chr4:137487112..137487117, +
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_ab2327fa167ab3045dff25e12b49065fp@chr15:88669906..88669914, +
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_ab2327fa167ab3045dff25e12b49065fp@chr1:137570295..137570315, +
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_ab2327fa167ab3045dff25e12b49065fp@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_ab2327fa167ab3045dff25e12b49065fp@chr10:93819538..93819549, +
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_ab2327fa167ab3045dff25e12b49065fp8@Il3ra
3.07e-86FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_ab2327fa167ab3045dff25e12b49065fp@chr11:118287827..118287833, -
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_ab2327fa167ab3045dff25e12b49065fp@chr17:35106363..35106372, -
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_ab2327fa167ab3045dff25e12b49065fp@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_ab2327fa167ab3045dff25e12b49065fp@chr5:32912678..32912687, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_ab2327fa167ab3045dff25e12b49065fp@chr11:119254092..119254100, -
3.07e-86FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_ab2327fa167ab3045dff25e12b49065fp@chr4:86335502..86335509, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_ab2327fa167ab3045dff25e12b49065fp@chr17:35093764..35093773, -

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