CL:0000831: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment=MCP are CD16-positive, CD32-positive, CD34-positive, CD45-positive, integrin beta-7-positive, and lin-negative (CD2, CD3e, CD4, CD5, CD8a, CD14, CD19, CD20, CD27, integrin alpha-M, ly6c, ly6g, NCAM-1, and ter119). These cells also express the transcription factors GATA-1, GATA-2, and MITF, but not C/EBPa. | |comment=MCP are CD16-positive, CD32-positive, CD34-positive, CD45-positive, integrin beta-7-positive, and lin-negative (CD2, CD3e, CD4, CD5, CD8a, CD14, CD19, CD20, CD27, integrin alpha-M, ly6c, ly6g, NCAM-1, and ter119). These cells also express the transcription factors GATA-1, GATA-2, and MITF, but not C/EBPa. | ||
|created_by= | |created_by= | ||
| | |def="A progenitor cell of the mast cell lineage. Markers for this cell are FceRIa-low, CD117-positive, CD9-positive, T1/ST2-positive, SCA1-negative, and lineage-negative." [GOC:add, GOC:dsd, http://www.copewithcytokines.de, PMCID:PMC1183570, PMCID:PMC1312421, PMID:8629001, PMID:9354811] | ||
|derives_from= | |derives_from= | ||
|develops_from=CL:0002028 | |develops_from=CL:0002028 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000831 | |||
|is_a=CL:0000763 ;;CL:0000839 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=mast cell progenitor | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
| | |subset= | ||
| | |synonym="CFU-Mast " RELATED [];;"CFU-MC" RELATED [];;"colony forming unit mast cell" RELATED [];;"MCP" EXACT [] | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:38, 12 September 2014
| Name: | mast cell progenitor |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A progenitor cell of the mast cell lineage. Markers for this cell are FceRIa-low, CD117-positive, CD9-positive, T1/ST2-positive, SCA1-negative, and lineage-negative." [GOC:add, GOC:dsd, http://www.copewithcytokines.de, PMCID:PMC1183570, PMCID:PMC1312421, PMID:8629001, PMID:9354811] |
| Synonyms: |
"CFU-Mast " RELATED [] "CFU-MC" RELATED [] "colony forming unit mast cell" RELATED [] "MCP" EXACT [] |
| Comments: | MCP are CD16-positive, CD32-positive, CD34-positive, CD45-positive, integrin beta-7-positive, and lin-negative (CD2, CD3e, CD4, CD5, CD8a, CD14, CD19, CD20, CD27, integrin alpha-M, ly6c, ly6g, NCAM-1, and ter119). These cells also express the transcription factors GATA-1, GATA-2, and MITF, but not C/EBPa. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000763(myeloid cell),CL:0000839(myeloid lineage restricted progenitor cell) |
|---|---|
| develops_from: | CL:0002028(basophil mast progenitor cell) |
Children
| develops from: | CL:0000097 (mast cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000831 (mast cell progenitor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
