CL:0000764: Difference between revisions
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|located_in= | |located_in= | ||
|name=erythroid lineage cell | |name=erythroid lineage cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:36, 12 September 2014
| Name: | erythroid lineage cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A immature or mature cell in the lineage leading to and including erythrocytes." [GOC:add, GOC:tfm] | ||
| Xrefs: |
| ||
| Synonyms: | "erythropoietic cell" EXACT [] | ||
| Comments: | Note that in FMA erythropoietic cells are types of nucleated erythrocytes and thus don't include erythrocytes. | ||
| Alt_id: | CL:0002156 |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000763(myeloid cell) |
|---|
Children
| is a: | CL:0000038 (erythroid progenitor cell),CL:0000547 (proerythroblast),CL:0000558 (reticulocyte),CL:0000765 (erythroblast) |
|---|---|
| disjoint from: | CL:0000556 (megakaryocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11931-125I5 (CD34 cells differentiated to erythrocyte lineage, biol_ rep1)
- 11932-125I6 (CD34 cells differentiated to erythrocyte lineage, biol_ rep2)
- 13063-139I3 (J2E erythroblastic leukemia response to erythropoietin)
- 13064-139I4 (J2E erythroblastic leukemia response to erythropoietin)
- 13065-139I5 (J2E erythroblastic leukemia response to erythropoietin)
- 13066-139I6 (J2E erythroblastic leukemia response to erythropoietin)
- 13067-139I7 (J2E erythroblastic leukemia response to erythropoietin)
- 13068-139I8 (J2E erythroblastic leukemia response to erythropoietin)
- 13069-139I9 (J2E erythroblastic leukemia response to erythropoietin)
- 13070-140A1 (J2E erythroblastic leukemia response to erythropoietin)
... further results Mouse (Mus musculus)
- 11931-125I5 (CD34 cells differentiated to erythrocyte lineage, biol_ rep1)
- 11932-125I6 (CD34 cells differentiated to erythrocyte lineage, biol_ rep2)
- 13063-139I3 (J2E erythroblastic leukemia response to erythropoietin)
- 13064-139I4 (J2E erythroblastic leukemia response to erythropoietin)
- 13065-139I5 (J2E erythroblastic leukemia response to erythropoietin)
- 13066-139I6 (J2E erythroblastic leukemia response to erythropoietin)
- 13067-139I7 (J2E erythroblastic leukemia response to erythropoietin)
- 13068-139I8 (J2E erythroblastic leukemia response to erythropoietin)
- 13069-139I9 (J2E erythroblastic leukemia response to erythropoietin)
- 13070-140A1 (J2E erythroblastic leukemia response to erythropoietin)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000764 (erythroid lineage cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.29e-195 | FFCP PHASE1:Hg19::chr17:42392517..42392522,+#_2692d9344d66030269b88cd88732d3fe | p17@RUNDC3A |
| 3.29e-195 | FFCP PHASE1:Hg19::chr11:5248435..5248444,+#_2692d9344d66030269b88cd88732d3fe | p@chr11:5248435..5248444, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr2:62801311..62801318,+#_2692d9344d66030269b88cd88732d3fe | p@chr2:62801311..62801318, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr22:30680245..30680254,-#_2692d9344d66030269b88cd88732d3fe | p@chr22:30680245..30680254, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr11:5247730..5247736,-#_2692d9344d66030269b88cd88732d3fe | p@chr11:5247730..5247736, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr10:94679592..94679594,-#_2692d9344d66030269b88cd88732d3fe | p@chr10:94679592..94679594, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr22:30680245..30680254,-#_2692d9344d66030269b88cd88732d3fe | p@chr22:30680245..30680254, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr19:1207927..1207939,-#_2692d9344d66030269b88cd88732d3fe | p@chr19:1207927..1207939, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr8:138915590..138915591,+#_2692d9344d66030269b88cd88732d3fe | p@chr8:138915590..138915591, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr16:67228546..67228549,+#_2692d9344d66030269b88cd88732d3fe | p@chr16:67228546..67228549, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:220146675..220146678,-#_2692d9344d66030269b88cd88732d3fe | p@chr1:220146675..220146678, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr8:138915590..138915591,+#_2692d9344d66030269b88cd88732d3fe | p@chr8:138915590..138915591, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr21:27203678..27203684,+#_2692d9344d66030269b88cd88732d3fe | p@chr21:27203678..27203684, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr2:87816262..87816269,+#_2692d9344d66030269b88cd88732d3fe | p@chr2:87816262..87816269, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr2:87816262..87816269,+#_2692d9344d66030269b88cd88732d3fe | p@chr2:87816262..87816269, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr17:27188395..27188398,-#_2692d9344d66030269b88cd88732d3fe | p1@MIR451A |
| 3.29e-195 | FFCP PHASE1:Hg19::chr20:24432163..24432165,+#_2692d9344d66030269b88cd88732d3fe | p@chr20:24432163..24432165, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr6:155472342..155472346,-#_2692d9344d66030269b88cd88732d3fe | p@chr6:155472342..155472346, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr11:57415965..57415973,+#_2692d9344d66030269b88cd88732d3fe | p5@CLP1 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr7:23205190..23205198,+#_2692d9344d66030269b88cd88732d3fe | p10@KLHL7 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr13:106256314..106256318,+#_2692d9344d66030269b88cd88732d3fe | p@chr13:106256314..106256318, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:57416011..57416016,+#_2692d9344d66030269b88cd88732d3fe | p9@CLP1 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr8:63838198..63838201,+#_2692d9344d66030269b88cd88732d3fe | p@chr8:63838198..63838201, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr8:63838198..63838201,+#_2692d9344d66030269b88cd88732d3fe | p@chr8:63838198..63838201, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr13:78682773..78682778,+#_2692d9344d66030269b88cd88732d3fe | p@chr13:78682773..78682778, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:95582484..95582492,+#_2692d9344d66030269b88cd88732d3fe | p10@TMEM56 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:95582484..95582492,+#_2692d9344d66030269b88cd88732d3fe | p10@TMEM56 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr6:10585661..10585670,+#_2692d9344d66030269b88cd88732d3fe | p26@GCNT2 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:25598993..25599007,+#_2692d9344d66030269b88cd88732d3fe | p1@RHD |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:25598993..25599007,+#_2692d9344d66030269b88cd88732d3fe | p1@RHD |
| 3.29e-195 | FFCP PHASE2:Hg19::chr16:15616042..15616045,+#_2692d9344d66030269b88cd88732d3fe | p@chr16:15616042..15616045, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr16:227522..227524,+#_2692d9344d66030269b88cd88732d3fe | p@chr16:227522..227524, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr17:42366115..42366125,+#_2692d9344d66030269b88cd88732d3fe | p@chr17:42366115..42366125, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr19:1207927..1207939,-#_2692d9344d66030269b88cd88732d3fe | p@chr19:1207927..1207939, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:220146675..220146678,-#_2692d9344d66030269b88cd88732d3fe | p@chr1:220146675..220146678, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr7:23205190..23205198,+#_2692d9344d66030269b88cd88732d3fe | p10@KLHL7 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr4:82805715..82805717,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:82805715..82805717, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:115492263..115492265,+#_2692d9344d66030269b88cd88732d3fe | p@chr11:115492263..115492265, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr4:82805715..82805717,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:82805715..82805717, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr6:155472342..155472346,-#_2692d9344d66030269b88cd88732d3fe | p@chr6:155472342..155472346, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:5543682..5543685,+#_2692d9344d66030269b88cd88732d3fe | p@chr1:5543682..5543685, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr12:75560876..75560881,+#_2692d9344d66030269b88cd88732d3fe | p@chr12:75560876..75560881, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:5543682..5543685,+#_2692d9344d66030269b88cd88732d3fe | p@chr1:5543682..5543685, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr10:94679592..94679594,-#_2692d9344d66030269b88cd88732d3fe | p@chr10:94679592..94679594, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr12:131245491..131245492,+#_2692d9344d66030269b88cd88732d3fe | p@chr12:131245491..131245492, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr15:71406717..71406718,+#_2692d9344d66030269b88cd88732d3fe | p@chr15:71406717..71406718, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr7:23205201..23205207,+#_2692d9344d66030269b88cd88732d3fe | p13@KLHL7 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr14:96742091..96742094,-#_2692d9344d66030269b88cd88732d3fe | p@chr14:96742091..96742094, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr6:10585661..10585670,+#_2692d9344d66030269b88cd88732d3fe | p26@GCNT2 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr17:42343955..42343974,-#_2692d9344d66030269b88cd88732d3fe | p@chr17:42343955..42343974, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr14:55799575..55799582,+#_2692d9344d66030269b88cd88732d3fe | p@chr14:55799575..55799582, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr4:175593804..175593809,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:175593804..175593809, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr4:175593804..175593809,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:175593804..175593809, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr9:138852021..138852030,+#_2692d9344d66030269b88cd88732d3fe | p@chr9:138852021..138852030, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr6:10585672..10585677,+#_2692d9344d66030269b88cd88732d3fe | p42@GCNT2 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:25599018..25599028,+#_2692d9344d66030269b88cd88732d3fe | p3@RHD |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:25599018..25599028,+#_2692d9344d66030269b88cd88732d3fe | p3@RHD |
| 3.29e-195 | FFCP PHASE1:Hg19::chr4:190941380..190941381,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:190941380..190941381, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr3:49726561..49726577,+#_2692d9344d66030269b88cd88732d3fe | p3@RNF123 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr19:19535964..19535966,+#_2692d9344d66030269b88cd88732d3fe | p@chr19:19535964..19535966, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr13:23969126..23969130,+#_2692d9344d66030269b88cd88732d3fe | p@chr13:23969126..23969130, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr17:42392517..42392522,+#_2692d9344d66030269b88cd88732d3fe | p17@RUNDC3A |
| 3.29e-195 | FFCP PHASE2:Hg19::chr2:71833597..71833600,+#_2692d9344d66030269b88cd88732d3fe | p@chr2:71833597..71833600, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr2:71833597..71833600,+#_2692d9344d66030269b88cd88732d3fe | p@chr2:71833597..71833600, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr4:190941380..190941381,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:190941380..190941381, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr3:49726561..49726577,+#_2692d9344d66030269b88cd88732d3fe | p3@RNF123 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr19:19535964..19535966,+#_2692d9344d66030269b88cd88732d3fe | p@chr19:19535964..19535966, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr7:23205201..23205207,+#_2692d9344d66030269b88cd88732d3fe | p13@KLHL7 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr9:123853258..123853276,-#_2692d9344d66030269b88cd88732d3fe | p@chr9:123853258..123853276, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:158580993..158580998,-#_2692d9344d66030269b88cd88732d3fe | p@chr1:158580993..158580998, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr11:115492263..115492265,+#_2692d9344d66030269b88cd88732d3fe | p@chr11:115492263..115492265, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:66676050..66676060,+#_2692d9344d66030269b88cd88732d3fe | p@chr11:66676050..66676060, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:158580993..158580998,-#_2692d9344d66030269b88cd88732d3fe | p@chr1:158580993..158580998, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr10:86596455..86596456,+#_2692d9344d66030269b88cd88732d3fe | p@chr10:86596455..86596456, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr18:11740276..11740278,+#_2692d9344d66030269b88cd88732d3fe | p@chr18:11740276..11740278, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr9:138852021..138852030,+#_2692d9344d66030269b88cd88732d3fe | p@chr9:138852021..138852030, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr11:57416011..57416016,+#_2692d9344d66030269b88cd88732d3fe | p9@CLP1 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr13:106256314..106256318,+#_2692d9344d66030269b88cd88732d3fe | p@chr13:106256314..106256318, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr12:131245491..131245492,+#_2692d9344d66030269b88cd88732d3fe | p@chr12:131245491..131245492, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr6:10585672..10585677,+#_2692d9344d66030269b88cd88732d3fe | p42@GCNT2 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:5247692..5247701,-#_2692d9344d66030269b88cd88732d3fe | p@chr11:5247692..5247701, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr4:160049078..160049079,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:160049078..160049079, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr9:123853258..123853276,-#_2692d9344d66030269b88cd88732d3fe | p@chr9:123853258..123853276, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr6:10585684..10585689,+#_2692d9344d66030269b88cd88732d3fe | p37@GCNT2 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr8:101412217..101412218,+#_2692d9344d66030269b88cd88732d3fe | p@chr8:101412217..101412218, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr4:26378984..26378987,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:26378984..26378987, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr3:49726589..49726592,+#_2692d9344d66030269b88cd88732d3fe | p7@RNF123 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:5255612..5255613,-#_2692d9344d66030269b88cd88732d3fe | p10@HBD |
| 3.29e-195 | FFCP PHASE1:Hg19::chr17:27188395..27188398,-#_2692d9344d66030269b88cd88732d3fe | p1@MIR451A |
| 3.29e-195 | FFCP PHASE2:Hg19::chr9:45465498..45465501,+#_2692d9344d66030269b88cd88732d3fe | p@chr9:45465498..45465501, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr4:26378984..26378987,+#_2692d9344d66030269b88cd88732d3fe | p@chr4:26378984..26378987, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr16:15616042..15616045,+#_2692d9344d66030269b88cd88732d3fe | p@chr16:15616042..15616045, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr3:49726589..49726592,+#_2692d9344d66030269b88cd88732d3fe | p7@RNF123 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr13:78682773..78682778,+#_2692d9344d66030269b88cd88732d3fe | p@chr13:78682773..78682778, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:57415965..57415973,+#_2692d9344d66030269b88cd88732d3fe | p5@CLP1 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr2:112191654..112191660,-#_2692d9344d66030269b88cd88732d3fe | p@chr2:112191654..112191660, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:29581179..29581180,+#_2692d9344d66030269b88cd88732d3fe | p@chr11:29581179..29581180, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr2:112191654..112191660,-#_2692d9344d66030269b88cd88732d3fe | p@chr2:112191654..112191660, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr14:55799575..55799582,+#_2692d9344d66030269b88cd88732d3fe | p@chr14:55799575..55799582, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr12:75560876..75560881,+#_2692d9344d66030269b88cd88732d3fe | p@chr12:75560876..75560881, + |
