Personal tools

CL:0000710: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000710
|alt_id=
|name=neurecto-epithelial cell
|namespace=cell
|def="Epithelial cells derived from neural plate and neural crest." [GOC:tfm, http://63.198.234.228/OpenFMA/Neurecto-epithelial%20cell.html]
|xref=BTO:0004301;;FMA:70557
|is_a=CL:0000075;;CL:0002077
|synonym="neuroepithelial cell" BROAD []
|comment=The term "neuroepithelial cell" is used to describe both this cell type and sensory epithelial cell (CL:0000098).
|comment=The term "neuroepithelial cell" is used to describe both this cell type and sensory epithelial cell (CL:0000098).
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Epithelial cells derived from neural plate and neural crest." [GOC:tfm, http://63.198.234.228/OpenFMA/Neurecto-epithelial%20cell.html]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=CL:0000133
|develops_from=CL:0000133
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000710
|is_a=CL:0000075 ;;CL:0002077
|is_obsolete=
|located_in=
|located_in=
|name=neurecto-epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="neuroepithelial cell" BROAD []
|union_of=
|xref=BTO:0004301;;FMA:70557
}}
}}

Latest revision as of 16:36, 12 September 2014

Name:neurecto-epithelial cell
Namespace:FANTOM
Definition:"Epithelial cells derived from neural plate and neural crest." [GOC:tfm, http://63.198.234.228/OpenFMA/Neurecto-epithelial%20cell.html]
Xrefs:
links:

BTO:0004301

FMA:70557
Synonyms: "neuroepithelial cell" BROAD []
Comments:The term "neuroepithelial cell" is used to describe both this cell type and sensory epithelial cell (CL:0000098).


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000075(columnar/cuboidal epithelial cell),CL:0002077(ecto-epithelial cell)
develops_from:CL:0000133(neurectodermal cell)



Children


is a:CL:0000148 (melanocyte),CL:0000165 (neuroendocrine cell),CL:0000541 (melanoblast),CL:0002167 (olfactory epithelial cell),CL:0002304 (non-pigmented ciliary epithelial cell),CL:0002379 (meningothelial cell),CL:0005014 (auditory epithelial support cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000710 (neurecto-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr4:151450310..151450318,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE2:Mm9::chr4:151450310..151450318,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE2:Mm9::chr10:107349495..107349500,-#_438f5e8636f29feb6f8ac5f1fafb0977p6@Otogl
3.07e-86FFCP PHASE1:Mm9::chr2:163517841..163517844,-#_438f5e8636f29feb6f8ac5f1fafb0977p1@ENSMUST00000154065
3.07e-86FFCP PHASE1:Mm9::chr9:42207838..42207847,-#_438f5e8636f29feb6f8ac5f1fafb0977p14@Tecta
3.07e-86FFCP PHASE1:Mm9::chr9:42202683..42202684,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr17:34752992..34753001,-#_438f5e8636f29feb6f8ac5f1fafb0977p5@Egfl8
3.07e-86FFCP PHASE2:Mm9::chr9:42139059..42139081,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE2:Mm9::chr7:59135658..59135665,+#_438f5e8636f29feb6f8ac5f1fafb0977p22@Gas2
3.07e-86FFCP PHASE2:Mm9::chr10:67372807..67372809,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE1:Mm9::chr14:48406009..48406013,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE2:Mm9::chr15:94418486..94418491,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE2:Mm9::chr11:119881548..119881551,-#_438f5e8636f29feb6f8ac5f1fafb0977p19@Aatk
3.07e-86FFCP PHASE1:Mm9::chr15:55289275..55289297,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr5:113939859..113939865,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE1:Mm9::chr19:23001562..23001563,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE1:Mm9::chr4:151450365..151450374,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE1:Mm9::chr14:102291443..102291451,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE2:Mm9::chr9:77109269..77109270,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE2:Mm9::chr2:163517841..163517844,-#_438f5e8636f29feb6f8ac5f1fafb0977p1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr4:151450365..151450374,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE1:Mm9::chr5:92800684..92800687,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE2:Mm9::chr14:102291443..102291451,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE1:Mm9::chr11:119881548..119881551,-#_438f5e8636f29feb6f8ac5f1fafb0977p19@Aatk
3.07e-86FFCP PHASE2:Mm9::chr9:42147036..42147053,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE1:Mm9::chr19:55269566..55269577,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE2:Mm9::chr15:55289275..55289297,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE1:Mm9::chr10:24310748..24310749,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE2:Mm9::chr15:94418515..94418518,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE1:Mm9::chr7:59135658..59135665,+#_438f5e8636f29feb6f8ac5f1fafb0977p22@Gas2
3.07e-86FFCP PHASE2:Mm9::chr5:113939919..113939925,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE2:Mm9::chr14:62578740..62578749,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE2:Mm9::chr10:24310748..24310749,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE1:Mm9::chr14:102298599..102298602,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE2:Mm9::chr14:48406009..48406013,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE2:Mm9::chr6:30619458..30619461,-#_438f5e8636f29feb6f8ac5f1fafb0977p17@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr9:77109306..77109314,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE1:Mm9::chr10:97112452..97112459,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE1:Mm9::chr5:92800735..92800736,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE1:Mm9::chr14:119912363..119912365,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr9:42207838..42207847,-#_438f5e8636f29feb6f8ac5f1fafb0977p14@Tecta
3.07e-86FFCP PHASE2:Mm9::chr9:42202683..42202684,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr19:55270369..55270394,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr10:97112452..97112459,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE2:Mm9::chr19:23001562..23001563,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE1:Mm9::chr10:107349495..107349500,-#_438f5e8636f29feb6f8ac5f1fafb0977p6@Otogl
3.07e-86FFCP PHASE1:Mm9::chr6:30619458..30619461,-#_438f5e8636f29feb6f8ac5f1fafb0977p17@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr5:92800684..92800687,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE1:Mm9::chr9:77109269..77109270,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE1:Mm9::chr14:102291551..102291553,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE1:Mm9::chr9:42139059..42139081,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE2:Mm9::chr6:30620092..30620097,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE1:Mm9::chr14:62578740..62578749,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418486..94418491,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE1:Mm9::chr5:113939859..113939865,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE2:Mm9::chr14:102298599..102298602,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE2:Mm9::chr14:102291551..102291553,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr19:55269566..55269577,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE2:Mm9::chr14:119912363..119912365,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr6:30619311..30619322,-#_438f5e8636f29feb6f8ac5f1fafb0977p16@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr10:97109619..97109632,+#_438f5e8636f29feb6f8ac5f1fafb0977p5@Epyc
3.07e-86FFCP PHASE1:Mm9::chr6:30620092..30620097,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE2:Mm9::chr5:92800735..92800736,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE1:Mm9::chr9:77109306..77109314,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE1:Mm9::chr9:42147036..42147053,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE2:Mm9::chr17:34752992..34753001,-#_438f5e8636f29feb6f8ac5f1fafb0977p5@Egfl8
3.07e-86FFCP PHASE1:Mm9::chr10:67372807..67372809,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418515..94418518,-#_438f5e8636f29feb6f8ac5f1fafb0977p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE1:Mm9::chr7:128226917..128226918,+#_438f5e8636f29feb6f8ac5f1fafb0977p2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr5:113939919..113939925,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE2:Mm9::chr10:97109619..97109632,+#_438f5e8636f29feb6f8ac5f1fafb0977p5@Epyc
3.07e-86FFCP PHASE2:Mm9::chr19:55270369..55270394,+#_438f5e8636f29feb6f8ac5f1fafb0977p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr7:128226917..128226918,+#_438f5e8636f29feb6f8ac5f1fafb0977p2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr6:30619311..30619322,-#_438f5e8636f29feb6f8ac5f1fafb0977p16@Tsga14
1.05e-69FFCP PHASE1:Hg19::chrX:9707625..9707629,-#_3ecf043c2d012ef1bb7b18c995cc32e9p6@GPR143
1.05e-69FFCP PHASE2:Hg19::chrX:9707625..9707629,-#_3ecf043c2d012ef1bb7b18c995cc32e9p6@GPR143
7.68e-69FFCP PHASE1:Hg19::chr16:89986251..89986268,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr16:89986251..89986268, +
7.68e-69FFCP PHASE1:Hg19::chr9:12702367..12702377,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr9:12702367..12702377, +
7.68e-69FFCP PHASE2:Hg19::chr1:1497497..1497523,-#_d3ced7d0b3a9c0e9866a66c0cc80070dp1@AK129493
7.68e-69FFCP PHASE2:Hg19::chr1:154401791..154401807,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp11@IL6R
7.68e-69FFCP PHASE2:Hg19::chr9:12708978..12708990,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr9:12708978..12708990, +
7.68e-69FFCP PHASE2:Hg19::chr19:3557867..3557877,-#_d3ced7d0b3a9c0e9866a66c0cc80070dp7@MFSD12
7.68e-69FFCP PHASE2:Hg19::chr9:12695585..12695593,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp24@TYRP1
7.68e-69FFCP PHASE1:Hg19::chr9:12693291..12693298,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp33@TYRP1
7.68e-69FFCP PHASE2:Hg19::chr9:12709332..12709345,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr9:12709332..12709345, +
7.68e-69FFCP PHASE2:Hg19::chr6:4610902..4610913,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp1@ENST00000380106
7.68e-69FFCP PHASE2:Hg19::chr9:12708060..12708071,-#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr9:12708060..12708071, -
7.68e-69FFCP PHASE1:Hg19::chr1:1497497..1497523,-#_d3ced7d0b3a9c0e9866a66c0cc80070dp1@AK129493
7.68e-69FFCP PHASE2:Hg19::chr9:12702367..12702377,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr9:12702367..12702377, +
7.68e-69FFCP PHASE1:Hg19::chr1:154401791..154401807,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp11@IL6R
7.68e-69FFCP PHASE1:Hg19::chr9:12708978..12708990,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr9:12708978..12708990, +
7.68e-69FFCP PHASE1:Hg19::chr19:3557867..3557877,-#_d3ced7d0b3a9c0e9866a66c0cc80070dp7@MFSD12
7.68e-69FFCP PHASE1:Hg19::chr9:12695585..12695593,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp24@TYRP1
7.68e-69FFCP PHASE2:Hg19::chr16:89986251..89986268,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr16:89986251..89986268, +
7.68e-69FFCP PHASE2:Hg19::chr9:12693291..12693298,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp33@TYRP1
7.68e-69FFCP PHASE1:Hg19::chr9:12709332..12709345,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr9:12709332..12709345, +
7.68e-69FFCP PHASE1:Hg19::chr6:4610902..4610913,+#_d3ced7d0b3a9c0e9866a66c0cc80070dp1@ENST00000380106
7.68e-69FFCP PHASE1:Hg19::chr9:12708060..12708071,-#_d3ced7d0b3a9c0e9866a66c0cc80070dp@chr9:12708060..12708071, -
3.68e-65FFCP PHASE1:Hg19::chr17:505227..505267,-#_2c5c29630e723c41f0cda757d6e31b13p@chr17:505227..505267, -
3.68e-65FFCP PHASE2:Hg19::chr17:505227..505267,-#_2c5c29630e723c41f0cda757d6e31b13p@chr17:505227..505267, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000710&oldid=3275329"