CL:0000667

Name:	collagen secreting cell
Namespace:	FANTOM
Definition:	"An extracellular matrix secreting cell that secretes collagen." [GOC:tfm]

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000327(extracellular matrix secreting cell)

Children

is a:	CL:0000138 (chondrocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
• 10700-109G7 (chondrosarcoma cell line:SW 1353)
• 10720-109I9
• 10767-110F2
• 11261-116G1 (Chondrocyte - de diff, donor1)
• 11262-116G2
• 11338-117F6 (Chondrocyte - de diff, donor2)
• 11339-117F7 (Chondrocyte - re diff, donor2)
• 11410-118E6 (Chondrocyte - de diff, donor3)
• 11411-118E7 (Chondrocyte - re diff, donor3)

Mouse (Mus musculus)

• 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
• 10700-109G7 (chondrosarcoma cell line:SW 1353)
• 10720-109I9
• 10767-110F2
• 11261-116G1 (Chondrocyte - de diff, donor1)
• 11262-116G2
• 11338-117F6 (Chondrocyte - de diff, donor2)
• 11339-117F7 (Chondrocyte - re diff, donor2)
• 11410-118E6 (Chondrocyte - de diff, donor3)
• 11411-118E7 (Chondrocyte - re diff, donor3)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000667 (collagen secreting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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No analysis results for this cluster