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{{CL
{{CL
|id=CL:0000559
|alt_id=
|name=promonocyte
|namespace=cell;;efo
|def="A precursor in the monocytic series, being a cell intermediate in development between the monoblast and monocyte. This cell is CD11b-positive and has fine azurophil granules." [GOC:tfm, http://www.clt.astate.edu/wwilliam/, ISBN:0721601464]
|xref=BTO:0004657;;FMA:83551
|is_a=CL:0002194
|synonym=
|comment=Morphology: Mononuclear cell, diameter 14-18 _M, fine azurophilic granules; markers: CD11b (shared with many other myeloid cells); location: Adult: bone marrow; Fetal: Liver, Yolk Sac; role or process: hematopoiesis, monocyte development; lineage: hematopoietic, myeloid.
|comment=Morphology: Mononuclear cell, diameter 14-18 _M, fine azurophilic granules; markers: CD11b (shared with many other myeloid cells); location: Adult: bone marrow; Fetal: Liver, Yolk Sac; role or process: hematopoiesis, monocyte development; lineage: hematopoietic, myeloid.
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A precursor in the monocytic series, being a cell intermediate in development between the monoblast and monocyte. This cell is CD11b-positive and has fine azurophil granules." [GOC:tfm, http://www.clt.astate.edu/wwilliam/, ISBN:0721601464]
|subset=
|derives_from=
|derives_from=
|develops_from=CL:0000040
|develops_from=CL:0000040
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000559
|is_a=CL:0000763 ;;CL:0002194
|is_obsolete=
|located_in=
|located_in=
|name=promonocyte
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0004657;;FMA:83551
}}
}}

Latest revision as of 16:35, 12 September 2014

Name:promonocyte
Namespace:FANTOM
Definition:"A precursor in the monocytic series, being a cell intermediate in development between the monoblast and monocyte. This cell is CD11b-positive and has fine azurophil granules." [GOC:tfm, http://www.clt.astate.edu/wwilliam/, ISBN:0721601464]
Xrefs:
links:

BTO:0004657

FMA:83551
Comments:Morphology: Mononuclear cell, diameter 14-18 _M, fine azurophilic granules; markers: CD11b (shared with many other myeloid cells); location: Adult: bone marrow; Fetal: Liver, Yolk Sac; role or process: hematopoiesis, monocyte development; lineage: hematopoietic, myeloid.


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000763(myeloid cell),CL:0002194(monopoietic cell)
develops_from:CL:0000040(monoblast)



Children


develops from:CL:0000576 (monocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000559 (promonocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.04e-147FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_156a6923eb5a20063b67585794e2182bp@chr7:77050554..77050601, +
1.04e-147FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_156a6923eb5a20063b67585794e2182bp@chr7:77050554..77050601, +
5.64e-145FFCP PHASE2:Hg19::chr19:18288651..18288682,+#_75733b7867d3f4caded88ae2f146b80bp5@IFI30
5.64e-145FFCP PHASE1:Hg19::chr19:18288651..18288682,+#_75733b7867d3f4caded88ae2f146b80bp5@IFI30
4.95e-140FFCP PHASE2:Hg19::chr19:18288828..18288861,+#_21959462177705db4fa39bbe96417670p7@IFI30
4.95e-140FFCP PHASE1:Hg19::chr19:18288828..18288861,+#_21959462177705db4fa39bbe96417670p7@IFI30
5.06e-140FFCP PHASE2:Hg19::chr5:180242646..180242657,-#_58bf69dbec5c616b2fa221fe9fc7d7b0p15@MGAT1
5.06e-140FFCP PHASE1:Hg19::chr5:180242646..180242657,-#_58bf69dbec5c616b2fa221fe9fc7d7b0p15@MGAT1
1.31e-139FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_527d583732e3a2c741cb22be8439362dp@chr1:161188661..161188679, +
1.31e-139FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_527d583732e3a2c741cb22be8439362dp@chr1:161188661..161188679, +
5.87e-136FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_1d1d88d035bc19a6f001590e146d464fp1@CYP1B1-AS1
5.87e-136FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_1d1d88d035bc19a6f001590e146d464fp1@CYP1B1-AS1
5.37e-135FFCP PHASE1:Hg19::chr4:185314125..185314143,-#_9d944ceb64edb4201f2df6a76dcdaa29p@chr4:185314125..185314143, -
5.37e-135FFCP PHASE2:Hg19::chr4:185314125..185314143,-#_9d944ceb64edb4201f2df6a76dcdaa29p@chr4:185314125..185314143, -
3.75e-134FFCP PHASE1:Hg19::chr3:149531627..149531651,+#_8ebd7bf53a3269e27626467960daf76fp7@RNF13
3.75e-134FFCP PHASE2:Hg19::chr3:149531627..149531651,+#_8ebd7bf53a3269e27626467960daf76fp7@RNF13
6.15e-134FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_39c2e8a5b59bb5e6de478af8f35ca9efp@chr2:119726719..119726744, +
6.15e-134FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_39c2e8a5b59bb5e6de478af8f35ca9efp@chr2:119726719..119726744, +
7.41e-134FFCP PHASE2:Hg19::chr1:161187824..161187847,+#_75f815eabaf80853d82f6fff07de0508p@chr1:161187824..161187847, +
7.41e-134FFCP PHASE1:Hg19::chr1:161187824..161187847,+#_75f815eabaf80853d82f6fff07de0508p@chr1:161187824..161187847, +
2.24e-133FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_a430f88344a6ba9f74906bccfa680425p@chr17:7482481..7482508, -
2.24e-133FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_a430f88344a6ba9f74906bccfa680425p@chr17:7482481..7482508, -
4.55e-133FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_3ad903d9ef3935ad14d564d4d57e6fbcp@chr19:18286116..18286156, +
4.55e-133FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_3ad903d9ef3935ad14d564d4d57e6fbcp@chr19:18286116..18286156, +
1.09e-132FFCP PHASE1:Hg19::chr4:185314151..185314178,-#_9970487e203451350ffb2bcd7e4a91e8p@chr4:185314151..185314178, -
1.09e-132FFCP PHASE2:Hg19::chr4:185314151..185314178,-#_9970487e203451350ffb2bcd7e4a91e8p@chr4:185314151..185314178, -
1.13e-132FFCP PHASE2:Hg19::chr5:131280548..131280574,-#_14a9394cf8e5a9ad0ed35aa9974bd85ep1@ENST00000425320
1.13e-132FFCP PHASE1:Hg19::chr5:131280548..131280574,-#_14a9394cf8e5a9ad0ed35aa9974bd85ep1@ENST00000425320
1.42e-132FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_88980bb443b5c9a6d387329bdfe3aa86p@chr2:145429606..145429658, +
1.42e-132FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_88980bb443b5c9a6d387329bdfe3aa86p@chr2:145429606..145429658, +
1.21e-131FFCP PHASE2:Hg19::chr19:18288064..18288080,+#_23fe36470fac2f778f976da13850af9dp@chr19:18288064..18288080, +
1.21e-131FFCP PHASE1:Hg19::chr19:18288064..18288080,+#_23fe36470fac2f778f976da13850af9dp@chr19:18288064..18288080, +
2.27e-131FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_cacd5992b5a71b2923f60e5c6ab04b68p8@CTSS
2.27e-131FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_cacd5992b5a71b2923f60e5c6ab04b68p8@CTSS
2.82e-131FFCP PHASE2:Hg19::chrX:37664331..37664352,+#_e98d2bf93ac23f52c5de4e3dff151768p@chrX:37664331..37664352, +
2.82e-131FFCP PHASE1:Hg19::chrX:37664331..37664352,+#_e98d2bf93ac23f52c5de4e3dff151768p@chrX:37664331..37664352, +
4.07e-131FFCP PHASE2:Hg19::chr4:185314188..185314207,-#_4b05b6a2d9ebdbb90d790b4c7bc3d8f2p@chr4:185314188..185314207, -
4.07e-131FFCP PHASE1:Hg19::chr4:185314188..185314207,-#_4b05b6a2d9ebdbb90d790b4c7bc3d8f2p@chr4:185314188..185314207, -
5.24e-131FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_edd4826938e3eb8f30a05acf7e9a5b5cp@chr15:65174546..65174583, -
5.24e-131FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_edd4826938e3eb8f30a05acf7e9a5b5cp@chr15:65174546..65174583, -
2.76e-130FFCP PHASE1:Hg19::chr4:159727272..159727307,+#_89fb357c0d38dccded98b0b453ea906bp7@FNIP2
2.76e-130FFCP PHASE2:Hg19::chr4:159727272..159727307,+#_89fb357c0d38dccded98b0b453ea906bp7@FNIP2
3.58e-130FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_e09b3295da2c1060a2f4eb803d8f8ad0p@chr1:161188746..161188758, +
3.58e-130FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_e09b3295da2c1060a2f4eb803d8f8ad0p@chr1:161188746..161188758, +
2.17e-129FFCP PHASE2:Hg19::chr20:1517991..1518011,-#_6c2bf966427b038ce711d31fee398e3bp@chr20:1517991..1518011, -
2.17e-129FFCP PHASE1:Hg19::chr20:1517991..1518011,-#_6c2bf966427b038ce711d31fee398e3bp@chr20:1517991..1518011, -
3.46e-129FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_147b6f4d2100142223317afc8f0e0954p7@EMILIN2
3.46e-129FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_147b6f4d2100142223317afc8f0e0954p7@EMILIN2
1.47e-128FFCP PHASE1:Hg19::chr19:18288514..18288554,+#_bc41171699d5e3dec91431bcdd4e0fbap6@IFI30
1.47e-128FFCP PHASE2:Hg19::chr19:18288514..18288554,+#_bc41171699d5e3dec91431bcdd4e0fbap6@IFI30
1.78e-128FFCP PHASE1:Hg19::chr19:18288914..18288931,-#_f7098e1e2465dd4bc8e00bd58e16e00ap5@CU676849, p5@CU689079
1.78e-128FFCP PHASE2:Hg19::chr19:18288914..18288931,-#_f7098e1e2465dd4bc8e00bd58e16e00ap5@CU676849, p5@CU689079
2.01e-128FFCP PHASE1:Hg19::chr5:180242576..180242585,-#_1c49785b9e4700317a0da6dd81aaa3fbp12@MGAT1
2.01e-128FFCP PHASE2:Hg19::chr5:180242576..180242585,-#_1c49785b9e4700317a0da6dd81aaa3fbp12@MGAT1
2.32e-127FFCP PHASE2:Hg19::chr17:40168698..40168726,-#_8bc6592eed4a906e9085381f1c1956b7p1@AK126179
2.32e-127FFCP PHASE1:Hg19::chr17:40168698..40168726,-#_8bc6592eed4a906e9085381f1c1956b7p1@AK126179
2.49e-127FFCP PHASE2:Hg19::chr17:7483714..7483726,+#_2383f6f25855761c42653b551f668d99p@chr17:7483714..7483726, +
2.49e-127FFCP PHASE1:Hg19::chr17:7483714..7483726,+#_2383f6f25855761c42653b551f668d99p@chr17:7483714..7483726, +
1.19e-126FFCP PHASE2:Hg19::chr22:46998103..46998127,-#_78ae931ee4dd9125277ebed9c942a6d4p@chr22:46998103..46998127, -
1.19e-126FFCP PHASE1:Hg19::chr22:46998103..46998127,-#_78ae931ee4dd9125277ebed9c942a6d4p@chr22:46998103..46998127, -
2.16e-126FFCP PHASE1:Hg19::chr19:18285955..18285972,+#_969ea7020be97a706027fabcf19ef252p@chr19:18285955..18285972, +
2.16e-126FFCP PHASE2:Hg19::chr19:18285955..18285972,+#_969ea7020be97a706027fabcf19ef252p@chr19:18285955..18285972, +
3.83e-126FFCP PHASE1:Hg19::chr19:51625924..51625942,+#_e245ee8ca32d0027c2bac45e381654a9p@chr19:51625924..51625942, +
3.83e-126FFCP PHASE2:Hg19::chr19:51625924..51625942,+#_e245ee8ca32d0027c2bac45e381654a9p@chr19:51625924..51625942, +
7.27e-126FFCP PHASE1:Hg19::chr4:185266972..185267007,+#_9a459da4ddb2c5d178305081a23073d0p@chr4:185266972..185267007, +
7.27e-126FFCP PHASE2:Hg19::chr4:185266972..185267007,+#_9a459da4ddb2c5d178305081a23073d0p@chr4:185266972..185267007, +
2.66e-125FFCP PHASE2:Hg19::chrX:152086449..152086473,+#_e8a96f5b72b26db93f4f586ba29af09fp4@ZNF185
2.66e-125FFCP PHASE1:Hg19::chrX:152086449..152086473,+#_e8a96f5b72b26db93f4f586ba29af09fp4@ZNF185
7.73e-125FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_3ff2c9155d0e10a5d111f06f72f44fdfp2@ZEB2-AS1
7.73e-125FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_3ff2c9155d0e10a5d111f06f72f44fdfp2@ZEB2-AS1
8.12e-125FFCP PHASE2:Hg19::chr15:59469817..59469836,+#_732fa1abaf8824d1c7c3e50d3b7f9f30p@chr15:59469817..59469836, +
8.12e-125FFCP PHASE1:Hg19::chr15:59469817..59469836,+#_732fa1abaf8824d1c7c3e50d3b7f9f30p@chr15:59469817..59469836, +
1.56e-124FFCP PHASE2:Hg19::chr20:1517945..1517963,-#_cf7eb3eafda2c65c03d138e45e5b7871p@chr20:1517945..1517963, -
1.56e-124FFCP PHASE1:Hg19::chr20:1517945..1517963,-#_cf7eb3eafda2c65c03d138e45e5b7871p@chr20:1517945..1517963, -
1.65e-124FFCP PHASE2:Hg19::chr8:116588888..116588904,+#_c53f41f966b148058e3144f968cc7919p@chr8:116588888..116588904, +
1.65e-124FFCP PHASE1:Hg19::chr8:116588888..116588904,+#_c53f41f966b148058e3144f968cc7919p@chr8:116588888..116588904, +
1.87e-124FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_1e8619da8c8479af0270e5b8e14bad5bp@chr1:161188686..161188721, +
1.87e-124FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_1e8619da8c8479af0270e5b8e14bad5bp@chr1:161188686..161188721, +
7.08e-124FFCP PHASE1:Hg19::chr5:77845080..77845099,-#_def95e306254eb162bd892ae4b46a1cap10@LHFPL2
7.08e-124FFCP PHASE2:Hg19::chr5:77845080..77845099,-#_def95e306254eb162bd892ae4b46a1cap10@LHFPL2
1.48e-123FFCP PHASE1:Hg19::chr9:137264970..137264982,+#_824934f4e32a39b1e03d4dd3a52f01c2p@chr9:137264970..137264982, +
1.48e-123FFCP PHASE2:Hg19::chr9:137264970..137264982,+#_824934f4e32a39b1e03d4dd3a52f01c2p@chr9:137264970..137264982, +
6.01e-123FFCP PHASE1:Hg19::chr17:47294661..47294681,+#_2640ecb759c3e825812584918d8c3bdcp@chr17:47294661..47294681, +
6.01e-123FFCP PHASE2:Hg19::chr17:47294661..47294681,+#_2640ecb759c3e825812584918d8c3bdcp@chr17:47294661..47294681, +
1.14e-122FFCP PHASE1:Hg19::chr1:108593061..108593077,+#_5424478565f56413882d0df04af4fa0ep@chr1:108593061..108593077, +
1.14e-122FFCP PHASE2:Hg19::chr1:108593061..108593077,+#_5424478565f56413882d0df04af4fa0ep@chr1:108593061..108593077, +
2.07e-122FFCP PHASE2:Hg19::chrX:153286067..153286101,-#_d55791f7fb7b59555ed34c21ef9fb474p@chrX:153286067..153286101, -
2.07e-122FFCP PHASE1:Hg19::chrX:153286067..153286101,-#_d55791f7fb7b59555ed34c21ef9fb474p@chrX:153286067..153286101, -
3.07e-122FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_4a2ecdee08bb56702847caedbff02e93p@chr14:103587759..103587770, +
3.07e-122FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_4a2ecdee08bb56702847caedbff02e93p@chr14:103587759..103587770, +
7.82e-122FFCP PHASE1:Hg19::chr1:17945095..17945126,+#_5bbf12108f69bc81a04f4576d91cb3e3p7@ARHGEF10L
7.82e-122FFCP PHASE2:Hg19::chr1:17945095..17945126,+#_5bbf12108f69bc81a04f4576d91cb3e3p7@ARHGEF10L
3.27e-121FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_716c888ebc7d92c2218cca03e03e4b9ap@chr16:50313426..50313459, +
3.27e-121FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_716c888ebc7d92c2218cca03e03e4b9ap@chr16:50313426..50313459, +
3.74e-121FFCP PHASE2:Hg19::chr10:20105868..20105875,+#_896ccde95d73575240f0f11974e5cc4fp8@PLXDC2
3.74e-121FFCP PHASE1:Hg19::chr10:20105868..20105875,+#_896ccde95d73575240f0f11974e5cc4fp8@PLXDC2
7.36e-121FFCP PHASE2:Hg19::chr1:150705526..150705571,-#_722ba9be7d5570706134dc2b0de23681p@chr1:150705526..150705571, -
7.36e-121FFCP PHASE1:Hg19::chr1:150705526..150705571,-#_722ba9be7d5570706134dc2b0de23681p@chr1:150705526..150705571, -
1.75e-120FFCP PHASE2:Hg19::chr19:18283959..18283993,+#_1d8e691e76921e4f53bac1197c44d40fp@chr19:18283959..18283993, +
1.75e-120FFCP PHASE1:Hg19::chr19:18283959..18283993,+#_1d8e691e76921e4f53bac1197c44d40fp@chr19:18283959..18283993, +

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