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|located_in=
|located_in=
|name=serous secreting cell
|name=serous secreting cell
|namespace=cell
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:32, 12 September 2014

Name:serous secreting cell
Namespace:FANTOM
Definition:"Columnar glandular cell with irregular nucleus, copious granular endoplasmic reticulum and supranuclear granules. Secretes a watery fluid containing proteins known as serous fluid." [GOC:tfm, ISBN:0517223651, ISBN:0721662544]
Xrefs:
links:

BTO:0003687

FMA:62511
Synonyms: "serous cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000159(seromucus secreting cell)



Children


derives from:FF:0104511 (serous cystadenocarcinoma cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000313 (serous secreting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr20:15942024..15942025,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15942024..15942025, -
5.42e-195FFCP PHASE1:Hg19::chr4:159430869..159430885,-#_0447ba19613ec3795d4c7fa51b1d3378p1@ENST00000502566
5.42e-195FFCP PHASE1:Hg19::chr6:64050722..64050726,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr6:64050722..64050726, -
5.42e-195FFCP PHASE1:Hg19::chr12:132681008..132681011,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:132681008..132681011, +
5.42e-195FFCP PHASE1:Hg19::chr6:14049473..14049508,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr6:14049473..14049508, +
5.42e-195FFCP PHASE1:Hg19::chr20:62113538..62113571,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:62113538..62113571, -
5.42e-195FFCP PHASE2:Hg19::chrX:16530591..16530601,-#_0447ba19613ec3795d4c7fa51b1d3378p@chrX:16530591..16530601, -
5.42e-195FFCP PHASE1:Hg19::chr16:2106134..2106163,+#_0447ba19613ec3795d4c7fa51b1d3378p18@TSC2
5.42e-195FFCP PHASE1:Hg19::chr2:231906019..231906031,+#_0447ba19613ec3795d4c7fa51b1d3378p6@C2orf72
5.42e-195FFCP PHASE1:Hg19::chr10:85857839..85857840,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr10:85857839..85857840, -
5.42e-195FFCP PHASE1:Hg19::chr20:15871874..15871910,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15871874..15871910, -
5.42e-195FFCP PHASE2:Hg19::chr6:137844183..137844191,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr6:137844183..137844191, -
5.42e-195FFCP PHASE2:Hg19::chr17:36068486..36068493,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr17:36068486..36068493, +
5.42e-195FFCP PHASE1:Hg19::chr12:123070114..123070123,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:123070114..123070123, +
5.42e-195FFCP PHASE2:Hg19::chr12:132681039..132681046,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:132681039..132681046, +
5.42e-195FFCP PHASE2:Hg19::chr22:46812806..46812838,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr22:46812806..46812838, -
5.42e-195FFCP PHASE1:Hg19::chr20:15891295..15891297,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15891295..15891297, -
5.42e-195FFCP PHASE2:Hg19::chr8:20070210..20070250,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr8:20070210..20070250, +
5.42e-195FFCP PHASE2:Hg19::chr8:142247940..142247948,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr8:142247940..142247948, -
5.42e-195FFCP PHASE2:Hg19::chr13:23486051..23486062,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr13:23486051..23486062, +
5.42e-195FFCP PHASE1:Hg19::chr14:64405176..64405183,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr14:64405176..64405183, +
5.42e-195FFCP PHASE1:Hg19::chrX:35711783..35711785,+#_0447ba19613ec3795d4c7fa51b1d3378p@chrX:35711783..35711785, +
5.42e-195FFCP PHASE2:Hg19::chr2:34971950..34971953,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr2:34971950..34971953, +
5.42e-195FFCP PHASE2:Hg19::chr8:101363016..101363029,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr8:101363016..101363029, +
5.42e-195FFCP PHASE1:Hg19::chr1:46787487..46787492,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr1:46787487..46787492, -
5.42e-195FFCP PHASE1:Hg19::chr20:15942024..15942025,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15942024..15942025, -
5.42e-195FFCP PHASE2:Hg19::chr4:159446395..159446403,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr4:159446395..159446403, +
5.42e-195FFCP PHASE2:Hg19::chr20:15873011..15873014,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15873011..15873014, -
5.42e-195FFCP PHASE2:Hg19::chr1:214650069..214650072,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr1:214650069..214650072, -
5.42e-195FFCP PHASE2:Hg19::chr3:168861573..168861582,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr3:168861573..168861582, -
5.42e-195FFCP PHASE1:Hg19::chr4:175204717..175204728,-#_0447ba19613ec3795d4c7fa51b1d3378p17@FBXO8
5.42e-195FFCP PHASE2:Hg19::chr4:135331403..135331405,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr4:135331403..135331405, -
5.42e-195FFCP PHASE1:Hg19::chr17:36068486..36068493,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr17:36068486..36068493, +
5.42e-195FFCP PHASE2:Hg19::chr12:132681059..132681070,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:132681059..132681070, +
5.42e-195FFCP PHASE1:Hg19::chr7:134627808..134627842,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr7:134627808..134627842, +
5.42e-195FFCP PHASE1:Hg19::chr6:137844183..137844191,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr6:137844183..137844191, -
5.42e-195FFCP PHASE2:Hg19::chr6:64049378..64049403,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr6:64049378..64049403, -
5.42e-195FFCP PHASE1:Hg19::chr22:31739255..31739259,-#_0447ba19613ec3795d4c7fa51b1d3378p28@PATZ1
5.42e-195FFCP PHASE1:Hg19::chr8:20070210..20070250,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr8:20070210..20070250, +
5.42e-195FFCP PHASE1:Hg19::chr2:34971950..34971953,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr2:34971950..34971953, +
5.42e-195FFCP PHASE1:Hg19::chrX:16530591..16530601,-#_0447ba19613ec3795d4c7fa51b1d3378p@chrX:16530591..16530601, -
5.42e-195FFCP PHASE1:Hg19::chr8:142247940..142247948,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr8:142247940..142247948, -
5.42e-195FFCP PHASE1:Hg19::chr12:132681039..132681046,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:132681039..132681046, +
5.42e-195FFCP PHASE1:Hg19::chr8:101363016..101363029,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr8:101363016..101363029, +
5.42e-195FFCP PHASE2:Hg19::chr12:132680939..132680977,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:132680939..132680977, +
5.42e-195FFCP PHASE2:Hg19::chr4:159541085..159541093,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr4:159541085..159541093, +
5.42e-195FFCP PHASE2:Hg19::chr20:15878694..15878728,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15878694..15878728, -
5.42e-195FFCP PHASE2:Hg19::chr16:2106134..2106163,+#_0447ba19613ec3795d4c7fa51b1d3378p18@TSC2
5.42e-195FFCP PHASE2:Hg19::chr1:214650077..214650084,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr1:214650077..214650084, -
5.42e-195FFCP PHASE1:Hg19::chr20:15873011..15873014,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15873011..15873014, -
5.42e-195FFCP PHASE2:Hg19::chr11:705180..705187,+#_0447ba19613ec3795d4c7fa51b1d3378p39@EPS8L2
5.42e-195FFCP PHASE1:Hg19::chr3:168861573..168861582,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr3:168861573..168861582, -
5.42e-195FFCP PHASE2:Hg19::chr20:15898490..15898493,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15898490..15898493, -
5.42e-195FFCP PHASE2:Hg19::chr18:11959017..11959052,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr18:11959017..11959052, +
5.42e-195FFCP PHASE1:Hg19::chr22:46812806..46812838,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr22:46812806..46812838, -
5.42e-195FFCP PHASE1:Hg19::chr13:23486051..23486062,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr13:23486051..23486062, +
5.42e-195FFCP PHASE2:Hg19::chr5:31936363..31936370,+#_0447ba19613ec3795d4c7fa51b1d3378p19@PDZD2
5.42e-195FFCP PHASE2:Hg19::chr6:64050722..64050726,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr6:64050722..64050726, -
5.42e-195FFCP PHASE1:Hg19::chr18:11959017..11959052,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr18:11959017..11959052, +
5.42e-195FFCP PHASE2:Hg19::chr4:159430869..159430885,-#_0447ba19613ec3795d4c7fa51b1d3378p1@ENST00000502566
5.42e-195FFCP PHASE2:Hg19::chr3:168802151..168802153,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr3:168802151..168802153, -
5.42e-195FFCP PHASE2:Hg19::chr11:89223721..89223728,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr11:89223721..89223728, -
5.42e-195FFCP PHASE1:Hg19::chr4:159446395..159446403,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr4:159446395..159446403, +
5.42e-195FFCP PHASE2:Hg19::chr2:231906019..231906031,+#_0447ba19613ec3795d4c7fa51b1d3378p6@C2orf72
5.42e-195FFCP PHASE1:Hg19::chr12:132681059..132681070,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:132681059..132681070, +
5.42e-195FFCP PHASE2:Hg19::chr20:15871874..15871910,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15871874..15871910, -
5.42e-195FFCP PHASE1:Hg19::chr4:135331403..135331405,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr4:135331403..135331405, -
5.42e-195FFCP PHASE1:Hg19::chr1:214650069..214650072,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr1:214650069..214650072, -
5.42e-195FFCP PHASE2:Hg19::chr12:132681008..132681011,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:132681008..132681011, +
5.42e-195FFCP PHASE1:Hg19::chr20:15878694..15878728,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15878694..15878728, -
5.42e-195FFCP PHASE2:Hg19::chr10:85857839..85857840,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr10:85857839..85857840, -
5.42e-195FFCP PHASE2:Hg19::chr6:14049473..14049508,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr6:14049473..14049508, +
5.42e-195FFCP PHASE2:Hg19::chr20:62113538..62113571,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:62113538..62113571, -
5.42e-195FFCP PHASE2:Hg19::chrX:35711783..35711785,+#_0447ba19613ec3795d4c7fa51b1d3378p@chrX:35711783..35711785, +
5.42e-195FFCP PHASE1:Hg19::chr6:64049378..64049403,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr6:64049378..64049403, -
5.42e-195FFCP PHASE1:Hg19::chr12:132680939..132680977,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:132680939..132680977, +
5.42e-195FFCP PHASE1:Hg19::chr5:31936363..31936370,+#_0447ba19613ec3795d4c7fa51b1d3378p19@PDZD2
5.42e-195FFCP PHASE1:Hg19::chr20:15898490..15898493,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15898490..15898493, -
5.42e-195FFCP PHASE2:Hg19::chr14:64405176..64405183,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr14:64405176..64405183, +
5.42e-195FFCP PHASE2:Hg19::chr12:123070114..123070123,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr12:123070114..123070123, +
5.42e-195FFCP PHASE1:Hg19::chr11:705180..705187,+#_0447ba19613ec3795d4c7fa51b1d3378p39@EPS8L2
5.42e-195FFCP PHASE2:Hg19::chr1:46787487..46787492,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr1:46787487..46787492, -
5.42e-195FFCP PHASE2:Hg19::chr4:175204717..175204728,-#_0447ba19613ec3795d4c7fa51b1d3378p17@FBXO8
5.42e-195FFCP PHASE1:Hg19::chr4:159541085..159541093,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr4:159541085..159541093, +
5.42e-195FFCP PHASE1:Hg19::chr3:168802151..168802153,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr3:168802151..168802153, -
5.42e-195FFCP PHASE1:Hg19::chr1:214650077..214650084,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr1:214650077..214650084, -
5.42e-195FFCP PHASE2:Hg19::chr20:15891295..15891297,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr20:15891295..15891297, -
5.42e-195FFCP PHASE2:Hg19::chr7:134627808..134627842,+#_0447ba19613ec3795d4c7fa51b1d3378p@chr7:134627808..134627842, +
5.42e-195FFCP PHASE1:Hg19::chr11:89223721..89223728,-#_0447ba19613ec3795d4c7fa51b1d3378p@chr11:89223721..89223728, -
5.42e-195FFCP PHASE2:Hg19::chr22:31739255..31739259,-#_0447ba19613ec3795d4c7fa51b1d3378p28@PATZ1
9.37e-99FFCP PHASE2:Hg19::chr7:151791485..151791495,+#_a75d0e74fc58d18a47da6db5e709c1edp15@GALNT11
9.37e-99FFCP PHASE1:Hg19::chr1:215257112..215257119,+#_a75d0e74fc58d18a47da6db5e709c1edp@chr1:215257112..215257119, +
9.37e-99FFCP PHASE1:Hg19::chr20:15916678..15916682,-#_a75d0e74fc58d18a47da6db5e709c1edp@chr20:15916678..15916682, -
9.37e-99FFCP PHASE1:Hg19::chr6:24323980..24323989,-#_a75d0e74fc58d18a47da6db5e709c1edp@chr6:24323980..24323989, -
9.37e-99FFCP PHASE2:Hg19::chr18:69246146..69246156,-#_a75d0e74fc58d18a47da6db5e709c1edp3@LOC100505776
9.37e-99FFCP PHASE1:Hg19::chr13:23467567..23467577,+#_a75d0e74fc58d18a47da6db5e709c1edp@chr13:23467567..23467577, +
9.37e-99FFCP PHASE1:Hg19::chr18:69246146..69246156,-#_a75d0e74fc58d18a47da6db5e709c1edp3@LOC100505776
9.37e-99FFCP PHASE1:Hg19::chr5:175799252..175799262,-#_a75d0e74fc58d18a47da6db5e709c1edp@chr5:175799252..175799262, -
9.37e-99FFCP PHASE1:Hg19::chr22:31495739..31495756,+#_a75d0e74fc58d18a47da6db5e709c1edp33@SMTN
9.37e-99FFCP PHASE1:Hg19::chr6:75233360..75233363,+#_a75d0e74fc58d18a47da6db5e709c1edp@chr6:75233360..75233363, +

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