CL:0000095: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=CL:0000133 | |develops_from=CL:0000133 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000095 | |||
|is_a=CL:0002319 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=neuron associated cell | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:29, 12 September 2014
| Name: | neuron associated cell |
|---|---|
| Namespace: | FANTOM |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002319(neural cell) |
|---|---|
| develops_from: | CL:0000133(neurectodermal cell) |
Children
| is a: | CL:0000123 (neuron associated cell (sensu Vertebrata)),CL:0000125 (glial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10413-106B8 (glioma cell line:GI-1)
- 10425-106D2 (astrocytoma cell line:TM-31)
- 10442-106F1 (schwannoma cell line:HS-PSS)
- 10444-106F3 (glioblastoma cell line:A172)
- 10456-106G6
- 10475-106I7 (retinoblastoma cell line:Y79)
- 10485-107A8 (glioblastoma cell line:T98G)
- 10559-108A1
- 10669-109D3
- 10670-109D4
... further results Mouse (Mus musculus)
- 10413-106B8 (glioma cell line:GI-1)
- 10425-106D2 (astrocytoma cell line:TM-31)
- 10442-106F1 (schwannoma cell line:HS-PSS)
- 10444-106F3 (glioblastoma cell line:A172)
- 10456-106G6
- 10475-106I7 (retinoblastoma cell line:Y79)
- 10485-107A8 (glioblastoma cell line:T98G)
- 10559-108A1
- 10669-109D3
- 10670-109D4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000095 (neuron associated cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.33e-61 | FFCP PHASE2:Mm9::chr1:72873192..72873206,+#_a1f1fbbf3d307084337c33bb0e350725 | p@chr1:72873192..72873206, + |
| 8.33e-61 | FFCP PHASE1:Mm9::chr8:28132545..28132551,+#_a1f1fbbf3d307084337c33bb0e350725 | p@chr8:28132545..28132551, + |
| 8.33e-61 | FFCP PHASE2:Mm9::chr8:28132545..28132551,+#_a1f1fbbf3d307084337c33bb0e350725 | p@chr8:28132545..28132551, + |
| 8.33e-61 | FFCP PHASE1:Mm9::chr1:72873192..72873206,+#_a1f1fbbf3d307084337c33bb0e350725 | p@chr1:72873192..72873206, + |
| 1.74e-53 | FFCP PHASE1:Mm9::chr19:8788816..8788826,-#_c286a79e41c836fc0413416a90c541c0 | p14@Slc3a2 |
| 1.74e-53 | FFCP PHASE2:Mm9::chr19:8788816..8788826,-#_c286a79e41c836fc0413416a90c541c0 | p14@Slc3a2 |
| 3.55e-53 | FFCP PHASE2:Mm9::chr8:11006242..11006246,-#_8452626068f117c7366eafcb7d57aec4 | p@chr8:11006242..11006246, - |
| 3.55e-53 | FFCP PHASE1:Mm9::chr8:11006242..11006246,-#_8452626068f117c7366eafcb7d57aec4 | p@chr8:11006242..11006246, - |
| 3.17e-52 | FFCP PHASE2:Hg19::chr4:169553987..169553999,+#_ee7a94cff8dd784118a27b72a724b7c0 | p@chr4:169553987..169553999, + |
| 3.17e-52 | FFCP PHASE1:Hg19::chr4:169553987..169553999,+#_ee7a94cff8dd784118a27b72a724b7c0 | p@chr4:169553987..169553999, + |
| 8.65e-48 | FFCP PHASE1:Mm9::chr19:8788794..8788806,-#_5185175046df94827eccd5b583e98667 | p6@Slc3a2 |
| 8.65e-48 | FFCP PHASE2:Mm9::chr8:96677795..96677811,+#_5185175046df94827eccd5b583e98667 | p@chr8:96677795..96677811, + |
| 8.65e-48 | FFCP PHASE1:Mm9::chr8:96677795..96677811,+#_5185175046df94827eccd5b583e98667 | p@chr8:96677795..96677811, + |
| 8.65e-48 | FFCP PHASE2:Mm9::chr3:121130390..121130408,-#_5185175046df94827eccd5b583e98667 | p@chr3:121130390..121130408, - |
| 8.65e-48 | FFCP PHASE2:Mm9::chr19:8788794..8788806,-#_5185175046df94827eccd5b583e98667 | p6@Slc3a2 |
| 8.65e-48 | FFCP PHASE1:Mm9::chr3:121130390..121130408,-#_5185175046df94827eccd5b583e98667 | p@chr3:121130390..121130408, - |
| 8.65e-48 | FFCP PHASE1:Mm9::chr8:96677906..96677921,-#_5185175046df94827eccd5b583e98667 | p@chr8:96677906..96677921, - |
| 8.65e-48 | FFCP PHASE2:Mm9::chr8:96677906..96677921,-#_5185175046df94827eccd5b583e98667 | p@chr8:96677906..96677921, - |
| 1.01e-47 | FFCP PHASE1:Mm9::chr11:102758074..102758083,+#_72d99a71613bf114ee73df81fec3bc04 | p@chr11:102758074..102758083, + |
| 1.01e-47 | FFCP PHASE2:Mm9::chr3:89028994..89029006,+#_72d99a71613bf114ee73df81fec3bc04 | p5@Thbs3 |
| 1.01e-47 | FFCP PHASE1:Mm9::chr3:89028994..89029006,+#_72d99a71613bf114ee73df81fec3bc04 | p5@Thbs3 |
| 1.01e-47 | FFCP PHASE2:Mm9::chr11:102758074..102758083,+#_72d99a71613bf114ee73df81fec3bc04 | p@chr11:102758074..102758083, + |
| 1.39e-47 | FFCP PHASE2:Mm9::chr14:122864178..122864180,+#_d395240d5c1cb14d6fac8cf778a30b0d | p@chr14:122864178..122864180, + |
| 1.39e-47 | FFCP PHASE1:Mm9::chr14:122864178..122864180,+#_d395240d5c1cb14d6fac8cf778a30b0d | p@chr14:122864178..122864180, + |
| 4.52e-45 | FFCP PHASE2:Mm9::chr11:102807862..102807882,-#_878ff9f1281bb0f84a7d9003cfa9e124 | p4@C1ql1 |
| 4.52e-45 | FFCP PHASE2:Mm9::chr9:37174919..37174932,+#_878ff9f1281bb0f84a7d9003cfa9e124 | p3@Hepacam |
| 4.52e-45 | FFCP PHASE1:Mm9::chr11:102807862..102807882,-#_878ff9f1281bb0f84a7d9003cfa9e124 | p4@C1ql1 |
| 4.52e-45 | FFCP PHASE1:Mm9::chr9:37174919..37174932,+#_878ff9f1281bb0f84a7d9003cfa9e124 | p3@Hepacam |
| 5.38e-45 | FFCP PHASE2:Mm9::chr11:102754827..102754845,-#_34e1b5b0aa0ff044ea7969779e1e4c3e | p@chr11:102754827..102754845, - |
| 5.38e-45 | FFCP PHASE1:Mm9::chr11:102754827..102754845,-#_34e1b5b0aa0ff044ea7969779e1e4c3e | p@chr11:102754827..102754845, - |
| 7.62e-45 | FFCP PHASE1:Mm9::chr14:70592626..70592638,-#_2a9d029a3779fc2c43d2afe1292f5258 | p@chr14:70592626..70592638, - |
| 7.62e-45 | FFCP PHASE2:Mm9::chr14:70592626..70592638,-#_2a9d029a3779fc2c43d2afe1292f5258 | p@chr14:70592626..70592638, - |
| 8.43e-44 | FFCP PHASE2:Mm9::chr11:102749254..102749263,-#_66f12631f5ea7aa72d659e666e03ce72 | p@chr11:102749254..102749263, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chr8:73022520..73022524,+#_66f12631f5ea7aa72d659e666e03ce72 | p@chr8:73022520..73022524, + |
| 8.43e-44 | FFCP PHASE2:Mm9::chr3:88990698..88990709,+#_66f12631f5ea7aa72d659e666e03ce72 | p@chr3:88990698..88990709, + |
| 8.43e-44 | FFCP PHASE2:Mm9::chr11:75244815..75244826,-#_66f12631f5ea7aa72d659e666e03ce72 | p@chr11:75244815..75244826, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chr16:15895800..15895814,-#_66f12631f5ea7aa72d659e666e03ce72 | p@chr16:15895800..15895814, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chr11:102749254..102749263,-#_66f12631f5ea7aa72d659e666e03ce72 | p@chr11:102749254..102749263, - |
| 8.43e-44 | FFCP PHASE1:Mm9::chr3:88990698..88990709,+#_66f12631f5ea7aa72d659e666e03ce72 | p@chr3:88990698..88990709, + |
| 8.43e-44 | FFCP PHASE2:Mm9::chr8:73022520..73022524,+#_66f12631f5ea7aa72d659e666e03ce72 | p@chr8:73022520..73022524, + |
| 8.43e-44 | FFCP PHASE1:Mm9::chr11:75244815..75244826,-#_66f12631f5ea7aa72d659e666e03ce72 | p@chr11:75244815..75244826, - |
| 8.43e-44 | FFCP PHASE2:Mm9::chr16:15895800..15895814,-#_66f12631f5ea7aa72d659e666e03ce72 | p@chr16:15895800..15895814, - |
| 3.14e-43 | FFCP PHASE1:Mm9::chr8:96676892..96676904,+#_a1ccc1a3fe7bbf93e99bf97736089bef | p@chr8:96676892..96676904, + |
| 3.14e-43 | FFCP PHASE1:Mm9::chr8:93340930..93340944,-#_a1ccc1a3fe7bbf93e99bf97736089bef | p@chr8:93340930..93340944, - |
| 3.14e-43 | FFCP PHASE2:Mm9::chr8:93340930..93340944,-#_a1ccc1a3fe7bbf93e99bf97736089bef | p@chr8:93340930..93340944, - |
| 3.14e-43 | FFCP PHASE2:Mm9::chr8:96676892..96676904,+#_a1ccc1a3fe7bbf93e99bf97736089bef | p@chr8:96676892..96676904, + |
| 3.62e-43 | FFCP PHASE2:Mm9::chr3:89030096..89030118,+#_8bfcd4d5accb2d1c1cc5d11959849c0d | p4@Thbs3 |
| 3.62e-43 | FFCP PHASE1:Mm9::chr3:89030096..89030118,+#_8bfcd4d5accb2d1c1cc5d11959849c0d | p4@Thbs3 |
| 4.82e-43 | FFCP PHASE2:Mm9::chr12:112910294..112910300,-#_3ca3f20e17fff057e3e46120736a559d | p@chr12:112910294..112910300, - |
| 4.82e-43 | FFCP PHASE1:Mm9::chr12:112910294..112910300,-#_3ca3f20e17fff057e3e46120736a559d | p@chr12:112910294..112910300, - |
| 5.57e-43 | FFCP PHASE2:Mm9::chr11:102755848..102755857,-#_a51011d94ac2321166acfde47a276357 | p@chr11:102755848..102755857, - |
| 5.57e-43 | FFCP PHASE1:Mm9::chr11:102755848..102755857,-#_a51011d94ac2321166acfde47a276357 | p@chr11:102755848..102755857, - |
| 1.31e-42 | FFCP PHASE2:Mm9::chr7:148211055..148211073,+#_f1434bb8384dbb11b046d312cebb9e37 | p@chr7:148211055..148211073, + |
| 1.31e-42 | FFCP PHASE1:Mm9::chr7:148211055..148211073,+#_f1434bb8384dbb11b046d312cebb9e37 | p@chr7:148211055..148211073, + |
| 2.31e-42 | FFCP PHASE2:Mm9::chr2:11261132..11261153,+#_9bcec6b797389822ca62d908f4a50fc4 | p2@Gm13293 |
| 2.31e-42 | FFCP PHASE1:Mm9::chr2:11261132..11261153,+#_9bcec6b797389822ca62d908f4a50fc4 | p2@Gm13293 |
| 1.46e-41 | FFCP PHASE2:Hg19::chr1:98642833..98642844,+#_ecdfc227c4bde2a3c9ad8765e899f11b | p@chr1:98642833..98642844, + |
| 1.46e-41 | FFCP PHASE1:Hg19::chr1:98642833..98642844,+#_ecdfc227c4bde2a3c9ad8765e899f11b | p@chr1:98642833..98642844, + |
| 1.6e-40 | FFCP PHASE1:Mm9::chr1:174128350..174128367,+#_8259cd8255044d092aea3da272481d3f | p@chr1:174128350..174128367, + |
| 1.6e-40 | FFCP PHASE2:Mm9::chr1:174128350..174128367,+#_8259cd8255044d092aea3da272481d3f | p@chr1:174128350..174128367, + |
| 7.38e-40 | FFCP PHASE1:Mm9::chr1:72895848..72895864,+#_c4f854a9f1e3c200b96811a83e684fe4 | p@chr1:72895848..72895864, + |
| 7.38e-40 | FFCP PHASE2:Mm9::chr1:72895848..72895864,+#_c4f854a9f1e3c200b96811a83e684fe4 | p@chr1:72895848..72895864, + |
| 1.17e-39 | FFCP PHASE1:Mm9::chr3:88990668..88990679,+#_7976cac45286012080fa941f529298bf | p@chr3:88990668..88990679, + |
| 1.17e-39 | FFCP PHASE2:Mm9::chr3:88990668..88990679,+#_7976cac45286012080fa941f529298bf | p@chr3:88990668..88990679, + |
| 1.59e-39 | FFCP PHASE2:Mm9::chr19:8788690..8788697,-#_4a85e4a1326766cc04356ed0a1136f53 | p17@Slc3a2 |
| 1.59e-39 | FFCP PHASE1:Mm9::chr19:8788690..8788697,-#_4a85e4a1326766cc04356ed0a1136f53 | p17@Slc3a2 |
| 2.16e-39 | FFCP PHASE1:Mm9::chr8:96704054..96704065,-#_e8ffeed78e349221d61b158f9d4f1536 | p@chr8:96704054..96704065, - |
| 2.16e-39 | FFCP PHASE2:Mm9::chr8:96704054..96704065,-#_e8ffeed78e349221d61b158f9d4f1536 | p@chr8:96704054..96704065, - |
| 2.2e-39 | FFCP PHASE1:Mm9::chr1:174150595..174150602,-#_c36798d753301be3f3cae239aa89c8d7 | p@chr1:174150595..174150602, - |
| 2.2e-39 | FFCP PHASE2:Mm9::chr1:174150595..174150602,-#_c36798d753301be3f3cae239aa89c8d7 | p@chr1:174150595..174150602, - |
| 2.51e-39 | FFCP PHASE1:Mm9::chr1:174128178..174128192,-#_0df7da797e8e77556d4f79072803ffa5 | p@chr1:174128178..174128192, - |
| 2.51e-39 | FFCP PHASE2:Mm9::chr16:15895858..15895888,-#_0df7da797e8e77556d4f79072803ffa5 | p@chr16:15895858..15895888, - |
| 2.51e-39 | FFCP PHASE1:Mm9::chr16:15895858..15895888,-#_0df7da797e8e77556d4f79072803ffa5 | p@chr16:15895858..15895888, - |
| 2.51e-39 | FFCP PHASE2:Mm9::chr1:174128178..174128192,-#_0df7da797e8e77556d4f79072803ffa5 | p@chr1:174128178..174128192, - |
| 8.08e-39 | FFCP PHASE2:Mm9::chr1:72895732..72895747,-#_8330667c0f7eee2358bb38d323be7d03 | p@chr1:72895732..72895747, - |
| 8.08e-39 | FFCP PHASE1:Mm9::chr1:72895732..72895747,-#_8330667c0f7eee2358bb38d323be7d03 | p@chr1:72895732..72895747, - |
| 4.04e-38 | FFCP PHASE2:Mm9::chr19:12839908..12839933,-#_41f569ca43b257dc28ba433296c90923 | p2@Cntf |
| 4.04e-38 | FFCP PHASE1:Mm9::chr19:12839908..12839933,-#_41f569ca43b257dc28ba433296c90923 | p2@Cntf |
| 5.94e-38 | FFCP PHASE2:Mm9::chr1:72898598..72898634,+#_af4f86ddf678597dbdf46674acd32b9a | p@chr1:72898598..72898634, + |
| 5.94e-38 | FFCP PHASE1:Mm9::chr1:72898598..72898634,+#_af4f86ddf678597dbdf46674acd32b9a | p@chr1:72898598..72898634, + |
| 7.4e-38 | FFCP PHASE1:Mm9::chr1:72898658..72898669,+#_14d8bfa4d0b719b776c66c00f83359cb | p@chr1:72898658..72898669, + |
| 7.4e-38 | FFCP PHASE2:Mm9::chr1:72898658..72898669,+#_14d8bfa4d0b719b776c66c00f83359cb | p@chr1:72898658..72898669, + |
| 1.03e-37 | FFCP PHASE2:Mm9::chr11:88828250..88828258,-#_91ec6281c309f49e3cfd6b8702b0ad5b | p1@ENSMUST00000121228 |
| 1.03e-37 | FFCP PHASE1:Mm9::chr11:88828250..88828258,-#_91ec6281c309f49e3cfd6b8702b0ad5b | p1@ENSMUST00000121228 |
| 9.57e-37 | FFCP PHASE2:Mm9::chr11:102754448..102754459,-#_b4df116db8c9508a62e29ccf46bbeb21 | p@chr11:102754448..102754459, - |
| 9.57e-37 | FFCP PHASE1:Mm9::chr11:102754448..102754459,-#_b4df116db8c9508a62e29ccf46bbeb21 | p@chr11:102754448..102754459, - |
| 1.13e-36 | FFCP PHASE2:Mm9::chr14:70592673..70592699,-#_6f8a6e2fb87c7714683b1e50416b2bef | p@chr14:70592673..70592699, - |
| 1.13e-36 | FFCP PHASE2:Mm9::chr1:72895689..72895698,-#_6f8a6e2fb87c7714683b1e50416b2bef | p@chr1:72895689..72895698, - |
| 1.13e-36 | FFCP PHASE1:Mm9::chr1:174128464..174128474,-#_6f8a6e2fb87c7714683b1e50416b2bef | p@chr1:174128464..174128474, - |
| 1.13e-36 | FFCP PHASE1:Mm9::chr1:72895689..72895698,-#_6f8a6e2fb87c7714683b1e50416b2bef | p@chr1:72895689..72895698, - |
| 1.13e-36 | FFCP PHASE1:Mm9::chr14:70592673..70592699,-#_6f8a6e2fb87c7714683b1e50416b2bef | p@chr14:70592673..70592699, - |
| 1.13e-36 | FFCP PHASE2:Mm9::chr4:153975408..153975411,+#_6f8a6e2fb87c7714683b1e50416b2bef | p1@ENSMUST00000132106 |
| 1.13e-36 | FFCP PHASE1:Mm9::chr4:153975408..153975411,+#_6f8a6e2fb87c7714683b1e50416b2bef | p1@ENSMUST00000132106 |
| 1.13e-36 | FFCP PHASE2:Mm9::chr1:174128464..174128474,-#_6f8a6e2fb87c7714683b1e50416b2bef | p@chr1:174128464..174128474, - |
| 1.59e-36 | FFCP PHASE1:Mm9::chr1:72898728..72898736,+#_0a7eef58d54da80c326280504e1bd939 | p@chr1:72898728..72898736, + |
| 1.59e-36 | FFCP PHASE2:Mm9::chr1:72898728..72898736,+#_0a7eef58d54da80c326280504e1bd939 | p@chr1:72898728..72898736, + |
| 1.59e-36 | FFCP PHASE2:Mm9::chr1:72898643..72898650,+#_0a7eef58d54da80c326280504e1bd939 | p@chr1:72898643..72898650, + |
| 1.59e-36 | FFCP PHASE1:Mm9::chr1:72898643..72898650,+#_0a7eef58d54da80c326280504e1bd939 | p@chr1:72898643..72898650, + |
| 1.88e-36 | FFCP PHASE2:Mm9::chr1:72895653..72895660,+#_7225632cb717a38b3e057dbbed41eeb9 | p9@Igfbp2 |
| 1.88e-36 | FFCP PHASE1:Mm9::chr1:72895653..72895660,+#_7225632cb717a38b3e057dbbed41eeb9 | p9@Igfbp2 |
