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{{CL
{{CL
|id=CL:0000079
|alt_id=
|name=stratified epithelial cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000066;;CL:0002371
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=CL:0000357
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000079
|is_a=CL:0000066 ;;CL:0002371
|is_obsolete=
|located_in=
|located_in=
|name=stratified epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:29, 12 September 2014

Name:stratified epithelial cell
Namespace:FANTOM


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0002371(somatic cell)
develops_from:CL:0000357(stratified epithelial stem cell)



Children


is a:CL:0000240 (stratified squamous epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000079 (stratified epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-66FFCP PHASE1:Hg19::chr5:64369097..64369105,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr5:64369097..64369105, +
2.83e-66FFCP PHASE1:Hg19::chr1:201288895..201288902,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr1:201288895..201288902, +
2.83e-66FFCP PHASE1:Hg19::chr20:49727833..49727839,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr20:49727833..49727839, -
2.83e-66FFCP PHASE1:Hg19::chr11:79659013..79659021,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr11:79659013..79659021, -
2.83e-66FFCP PHASE1:Hg19::chr22:27043104..27043111,+#_9b40cf5a08da0290ab2f86b171c41d64p27@MIAT
2.83e-66FFCP PHASE1:Hg19::chr1:216595350..216595395,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr1:216595350..216595395, -
2.83e-66FFCP PHASE2:Hg19::chr5:64369097..64369105,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr5:64369097..64369105, +
2.83e-66FFCP PHASE1:Hg19::chr15:46610897..46610904,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr15:46610897..46610904, +
2.83e-66FFCP PHASE2:Hg19::chr22:27043104..27043111,+#_9b40cf5a08da0290ab2f86b171c41d64p27@MIAT
2.83e-66FFCP PHASE1:Hg19::chr1:242843433..242843446,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr1:242843433..242843446, -
2.83e-66FFCP PHASE2:Hg19::chr1:216595350..216595395,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr1:216595350..216595395, -
2.83e-66FFCP PHASE1:Hg19::chr3:66452082..66452087,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr3:66452082..66452087, -
2.83e-66FFCP PHASE2:Hg19::chr1:242843433..242843446,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr1:242843433..242843446, -
2.83e-66FFCP PHASE2:Hg19::chr3:66452082..66452087,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr3:66452082..66452087, -
2.83e-66FFCP PHASE1:Hg19::chr11:79659052..79659060,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr11:79659052..79659060, -
2.83e-66FFCP PHASE1:Hg19::chr15:46610951..46610964,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr15:46610951..46610964, +
2.83e-66FFCP PHASE1:Hg19::chr4:6356121..6356152,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr4:6356121..6356152, -
2.83e-66FFCP PHASE1:Hg19::chr1:216196797..216196801,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr1:216196797..216196801, -
2.83e-66FFCP PHASE2:Hg19::chr19:39401676..39401683,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr19:39401676..39401683, -
2.83e-66FFCP PHASE2:Hg19::chr4:6356121..6356152,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr4:6356121..6356152, -
2.83e-66FFCP PHASE2:Hg19::chr15:46610847..46610851,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr15:46610847..46610851, +
2.83e-66FFCP PHASE2:Hg19::chr11:79659013..79659021,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr11:79659013..79659021, -
2.83e-66FFCP PHASE2:Hg19::chr1:216196797..216196801,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr1:216196797..216196801, -
2.83e-66FFCP PHASE1:Hg19::chr19:39401676..39401683,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr19:39401676..39401683, -
2.83e-66FFCP PHASE1:Hg19::chr6:112466463..112466468,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr6:112466463..112466468, +
2.83e-66FFCP PHASE2:Hg19::chr15:46610897..46610904,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr15:46610897..46610904, +
2.83e-66FFCP PHASE2:Hg19::chr11:79659052..79659060,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr11:79659052..79659060, -
2.83e-66FFCP PHASE2:Hg19::chr9:139089234..139089236,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr9:139089234..139089236, -
2.83e-66FFCP PHASE2:Hg19::chr6:112466463..112466468,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr6:112466463..112466468, +
2.83e-66FFCP PHASE1:Hg19::chr9:139089234..139089236,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr9:139089234..139089236, -
2.83e-66FFCP PHASE2:Hg19::chr1:40770344..40770353,-#_9b40cf5a08da0290ab2f86b171c41d64p29@COL9A2
2.83e-66FFCP PHASE2:Hg19::chr9:33719626..33719633,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr9:33719626..33719633, -
2.83e-66FFCP PHASE1:Hg19::chr15:46610847..46610851,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr15:46610847..46610851, +
2.83e-66FFCP PHASE1:Hg19::chr1:40770344..40770353,-#_9b40cf5a08da0290ab2f86b171c41d64p29@COL9A2
2.83e-66FFCP PHASE2:Hg19::chr15:46610951..46610964,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr15:46610951..46610964, +
2.83e-66FFCP PHASE1:Hg19::chr9:33719626..33719633,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr9:33719626..33719633, -
2.83e-66FFCP PHASE2:Hg19::chr1:201288895..201288902,+#_9b40cf5a08da0290ab2f86b171c41d64p@chr1:201288895..201288902, +
2.83e-66FFCP PHASE2:Hg19::chr20:49727833..49727839,-#_9b40cf5a08da0290ab2f86b171c41d64p@chr20:49727833..49727839, -
4.55e-50FFCP PHASE2:Hg19::chr1:16090914..16090925,+#_1419f780c6cc933744ad05da3f24d89bp22@FBLIM1
4.55e-50FFCP PHASE1:Hg19::chr1:16090914..16090925,+#_1419f780c6cc933744ad05da3f24d89bp22@FBLIM1
9.76e-45FFCP PHASE1:Hg19::chr1:155048171..155048179,+#_3ea813fe19b7bfd6ff4438af48137479p@chr1:155048171..155048179, +
9.76e-45FFCP PHASE1:Hg19::chr12:65175253..65175283,-#_3ea813fe19b7bfd6ff4438af48137479p@chr12:65175253..65175283, -
9.76e-45FFCP PHASE2:Hg19::chr9:33719660..33719671,-#_3ea813fe19b7bfd6ff4438af48137479p@chr9:33719660..33719671, -
9.76e-45FFCP PHASE2:Hg19::chr1:155048171..155048179,+#_3ea813fe19b7bfd6ff4438af48137479p@chr1:155048171..155048179, +
9.76e-45FFCP PHASE2:Hg19::chr11:128634589..128634606,+#_3ea813fe19b7bfd6ff4438af48137479p14@FLI1
9.76e-45FFCP PHASE1:Hg19::chr9:33719660..33719671,-#_3ea813fe19b7bfd6ff4438af48137479p@chr9:33719660..33719671, -
9.76e-45FFCP PHASE1:Hg19::chr1:155048200..155048207,+#_3ea813fe19b7bfd6ff4438af48137479p@chr1:155048200..155048207, +
9.76e-45FFCP PHASE2:Hg19::chr1:155048200..155048207,+#_3ea813fe19b7bfd6ff4438af48137479p@chr1:155048200..155048207, +
9.76e-45FFCP PHASE2:Hg19::chr5:145722450..145722456,+#_3ea813fe19b7bfd6ff4438af48137479p@chr5:145722450..145722456, +
9.76e-45FFCP PHASE1:Hg19::chr5:145722450..145722456,+#_3ea813fe19b7bfd6ff4438af48137479p@chr5:145722450..145722456, +
9.76e-45FFCP PHASE2:Hg19::chr16:53653257..53653264,-#_3ea813fe19b7bfd6ff4438af48137479p@chr16:53653257..53653264, -
9.76e-45FFCP PHASE2:Hg19::chr9:139096224..139096231,-#_3ea813fe19b7bfd6ff4438af48137479p@chr9:139096224..139096231, -
9.76e-45FFCP PHASE1:Hg19::chr9:139096224..139096231,-#_3ea813fe19b7bfd6ff4438af48137479p@chr9:139096224..139096231, -
9.76e-45FFCP PHASE1:Hg19::chr16:53653257..53653264,-#_3ea813fe19b7bfd6ff4438af48137479p@chr16:53653257..53653264, -
9.76e-45FFCP PHASE1:Hg19::chr5:64369069..64369083,+#_3ea813fe19b7bfd6ff4438af48137479p@chr5:64369069..64369083, +
9.76e-45FFCP PHASE2:Hg19::chr12:65175253..65175283,-#_3ea813fe19b7bfd6ff4438af48137479p@chr12:65175253..65175283, -
9.76e-45FFCP PHASE1:Hg19::chr22:35921483..35921490,-#_3ea813fe19b7bfd6ff4438af48137479p@chr22:35921483..35921490, -
9.76e-45FFCP PHASE1:Hg19::chr11:128634589..128634606,+#_3ea813fe19b7bfd6ff4438af48137479p14@FLI1
9.76e-45FFCP PHASE2:Hg19::chr5:64369069..64369083,+#_3ea813fe19b7bfd6ff4438af48137479p@chr5:64369069..64369083, +
9.76e-45FFCP PHASE2:Hg19::chr22:35921483..35921490,-#_3ea813fe19b7bfd6ff4438af48137479p@chr22:35921483..35921490, -
1.22e-44FFCP PHASE1:Hg19::chr12:54786411..54786421,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr12:54786411..54786421, -
1.22e-44FFCP PHASE1:Hg19::chr18:13165683..13165695,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr18:13165683..13165695, -
1.22e-44FFCP PHASE1:Hg19::chr11:31312513..31312524,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr11:31312513..31312524, -
1.22e-44FFCP PHASE2:Hg19::chr2:3152671..3152679,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr2:3152671..3152679, -
1.22e-44FFCP PHASE2:Hg19::chr20:49727891..49727898,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr20:49727891..49727898, -
1.22e-44FFCP PHASE2:Hg19::chr5:14742023..14742037,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr5:14742023..14742037, -
1.22e-44FFCP PHASE1:Hg19::chr20:49727891..49727898,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr20:49727891..49727898, -
1.22e-44FFCP PHASE1:Hg19::chr2:3152671..3152679,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr2:3152671..3152679, -
1.22e-44FFCP PHASE1:Hg19::chr5:14742023..14742037,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr5:14742023..14742037, -
1.22e-44FFCP PHASE2:Hg19::chr20:31116333..31116338,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr20:31116333..31116338, -
1.22e-44FFCP PHASE2:Hg19::chr18:13165683..13165695,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr18:13165683..13165695, -
1.22e-44FFCP PHASE1:Hg19::chr20:31116333..31116338,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr20:31116333..31116338, -
1.22e-44FFCP PHASE2:Hg19::chr5:145724630..145724641,+#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr5:145724630..145724641, +
1.22e-44FFCP PHASE2:Hg19::chr11:31312513..31312524,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr11:31312513..31312524, -
1.22e-44FFCP PHASE1:Hg19::chr5:145724630..145724641,+#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr5:145724630..145724641, +
1.22e-44FFCP PHASE1:Hg19::chr1:216286476..216286479,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr1:216286476..216286479, -
1.22e-44FFCP PHASE2:Hg19::chr1:216286476..216286479,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr1:216286476..216286479, -
1.22e-44FFCP PHASE2:Hg19::chr12:54786411..54786421,-#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr12:54786411..54786421, -
1.22e-44FFCP PHASE2:Hg19::chr5:145724642..145724652,+#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr5:145724642..145724652, +
1.22e-44FFCP PHASE1:Hg19::chr5:145724642..145724652,+#_ad2d6fbda8ff185270f3b43bee9d7a61p@chr5:145724642..145724652, +
1.52e-44FFCP PHASE2:Hg19::chr7:1327587..1327610,+#_92253cf5cb8efd87756d617baaf7ebf5p@chr7:1327587..1327610, +
1.52e-44FFCP PHASE1:Hg19::chr7:1327587..1327610,+#_92253cf5cb8efd87756d617baaf7ebf5p@chr7:1327587..1327610, +
1.52e-44FFCP PHASE2:Hg19::chr7:1327611..1327629,+#_92253cf5cb8efd87756d617baaf7ebf5p@chr7:1327611..1327629, +
1.52e-44FFCP PHASE1:Hg19::chr7:1327611..1327629,+#_92253cf5cb8efd87756d617baaf7ebf5p@chr7:1327611..1327629, +
1.52e-44FFCP PHASE1:Hg19::chr3:77121235..77121260,+#_92253cf5cb8efd87756d617baaf7ebf5p@chr3:77121235..77121260, +
1.52e-44FFCP PHASE2:Hg19::chr3:77121235..77121260,+#_92253cf5cb8efd87756d617baaf7ebf5p@chr3:77121235..77121260, +
5.62e-43FFCP PHASE2:Hg19::chr2:227008823..227008831,-#_42cd3f79ff29c52e1bccbc5afa96c92ap@chr2:227008823..227008831, -
5.62e-43FFCP PHASE1:Hg19::chr2:227008823..227008831,-#_42cd3f79ff29c52e1bccbc5afa96c92ap@chr2:227008823..227008831, -
1.33e-42FFCP PHASE1:Hg19::chr8:130798890..130798901,-#_b6285b69cf4986ea9f5edb25e9270919p3@GSDMC
1.33e-42FFCP PHASE2:Hg19::chr8:130798890..130798901,-#_b6285b69cf4986ea9f5edb25e9270919p3@GSDMC
7.14e-38FFCP PHASE2:Hg19::chr4:87770202..87770211,-#_a78da2c7c907a6d8a20b127b40e407e2p5@SLC10A6
7.14e-38FFCP PHASE1:Hg19::chr4:87770202..87770211,-#_a78da2c7c907a6d8a20b127b40e407e2p5@SLC10A6
2.34e-35FFCP PHASE2:Hg19::chr2:28785707..28785729,+#_f464c7f70af7d06ca6f01373721e16e6p@chr2:28785707..28785729, +
2.34e-35FFCP PHASE1:Hg19::chr2:28785707..28785729,+#_f464c7f70af7d06ca6f01373721e16e6p@chr2:28785707..28785729, +
4.27e-34FFCP PHASE2:Hg19::chr9:135433343..135433346,-#_0b1116d8500af97ebae0d0949c991fcdp@chr9:135433343..135433346, -
4.27e-34FFCP PHASE2:Hg19::chr3:182129807..182129809,-#_0b1116d8500af97ebae0d0949c991fcdp@chr3:182129807..182129809, -
4.27e-34FFCP PHASE2:Hg19::chr3:182262882..182262922,-#_0b1116d8500af97ebae0d0949c991fcdp@chr3:182262882..182262922, -
4.27e-34FFCP PHASE2:Hg19::chr5:145808948..145808956,+#_0b1116d8500af97ebae0d0949c991fcdp@chr5:145808948..145808956, +
4.27e-34FFCP PHASE1:Hg19::chr18:77543062..77543072,-#_0b1116d8500af97ebae0d0949c991fcdp@chr18:77543062..77543072, -
4.27e-34FFCP PHASE2:Hg19::chr2:197081754..197081790,-#_0b1116d8500af97ebae0d0949c991fcdp@chr2:197081754..197081790, -

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