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{{UBERON
{{UBERON
|id=UBERON:0010743
|alt_id=
|name=meningeal cluster
|namespace=
|def="The collection of all meningeal layers that line a central nervous system." [UBERON:cjm]
|xref=EHDAA2:0004661;;FMA:231572;;SCTID:362879001
|is_a=UBERON:0000477;;UBERON:0004121
|synonym="cluster of meninges" EXACT [FMA:231572];;"meninges" EXACT [FMA:231572]
|comment=In some primitive organisms, the meningeal cluster includes only the primitive meninx
|comment=In some primitive organisms, the meningeal cluster includes only the primitive meninx
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The collection of all meningeal layers that line a central nervous system." [UBERON:cjm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010743
|is_a=UBERON:0000477 ;;UBERON:0004121 ;;UBERON:0010314
|is_obsolete=
|located_in=
|located_in=
|name=meningeal cluster
|namespace=
|obo_creation_date=
|part_of=UBERON:0001017
|part_of=UBERON:0001017
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="cluster of meninges" EXACT [FMA:231572];;"meninges" EXACT [FMA:231572]
|union_of=
|xref=EHDAA2:0004661;;FMA:231572;;SCTID:362879001
}}
}}

Revision as of 11:51, 12 September 2014

Name:meningeal cluster
Definition:"The collection of all meningeal layers that line a central nervous system." [UBERON:cjm]
Xrefs:
links:

EHDAA2:0004661
FMA:231572

SCTID:362879001
Synonyms: "cluster of meninges" EXACT [FMA:231572]
"meninges" EXACT [FMA:231572]
Comments:In some primitive organisms, the meningeal cluster includes only the primitive meninx

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000477(anatomical cluster),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest)
part_of:UBERON:0001017(central nervous system)



Children

part of:UBERON:0002360 (meninx),UBERON:0007645 (future meninx)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010743 (meningeal cluster), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.75e-130FFCP PHASE1:Hg19::chr6:55740051..55740056,-#_c29b757236f6aeda0b280c92eff4821cp5@BMP5
1.75e-130FFCP PHASE2:Hg19::chr6:55740051..55740056,-#_c29b757236f6aeda0b280c92eff4821cp5@BMP5
1.55e-98FFCP PHASE2:Hg19::chr3:112931366..112931373,-#_5be9c452e68ced1858d2a70427bb3da4p@chr3:112931366..112931373, -
1.55e-98FFCP PHASE1:Hg19::chr3:112931383..112931390,-#_5be9c452e68ced1858d2a70427bb3da4p@chr3:112931383..112931390, -
1.55e-98FFCP PHASE1:Hg19::chr10:79398656..79398666,-#_5be9c452e68ced1858d2a70427bb3da4p25@KCNMA1
1.55e-98FFCP PHASE1:Hg19::chr2:217560615..217560623,-#_5be9c452e68ced1858d2a70427bb3da4p73@IGFBP5
1.55e-98FFCP PHASE2:Hg19::chr3:112931383..112931390,-#_5be9c452e68ced1858d2a70427bb3da4p@chr3:112931383..112931390, -
1.55e-98FFCP PHASE1:Hg19::chr3:112931404..112931414,-#_5be9c452e68ced1858d2a70427bb3da4p@chr3:112931404..112931414, -
1.55e-98FFCP PHASE1:Hg19::chr2:45234395..45234400,-#_5be9c452e68ced1858d2a70427bb3da4p@chr2:45234395..45234400, -
1.55e-98FFCP PHASE2:Hg19::chr2:217560615..217560623,-#_5be9c452e68ced1858d2a70427bb3da4p73@IGFBP5
1.55e-98FFCP PHASE2:Hg19::chr3:112931404..112931414,-#_5be9c452e68ced1858d2a70427bb3da4p@chr3:112931404..112931414, -
1.55e-98FFCP PHASE1:Hg19::chr3:112931435..112931445,-#_5be9c452e68ced1858d2a70427bb3da4p@chr3:112931435..112931445, -
1.55e-98FFCP PHASE1:Hg19::chr4:154712764..154712772,-#_5be9c452e68ced1858d2a70427bb3da4p@chr4:154712764..154712772, -
1.55e-98FFCP PHASE2:Hg19::chr2:45234395..45234400,-#_5be9c452e68ced1858d2a70427bb3da4p@chr2:45234395..45234400, -
1.55e-98FFCP PHASE1:Hg19::chr5:39892092..39892099,+#_5be9c452e68ced1858d2a70427bb3da4p@chr5:39892092..39892099, +
1.55e-98FFCP PHASE1:Hg19::chr8:43349847..43349852,+#_5be9c452e68ced1858d2a70427bb3da4p@chr8:43349847..43349852, +
1.55e-98FFCP PHASE2:Hg19::chr10:78078199..78078208,+#_5be9c452e68ced1858d2a70427bb3da4p8@C10orf11
1.55e-98FFCP PHASE2:Hg19::chr3:112931435..112931445,-#_5be9c452e68ced1858d2a70427bb3da4p@chr3:112931435..112931445, -
1.55e-98FFCP PHASE2:Hg19::chr4:154712764..154712772,-#_5be9c452e68ced1858d2a70427bb3da4p@chr4:154712764..154712772, -
1.55e-98FFCP PHASE1:Hg19::chr5:122434930..122434939,+#_5be9c452e68ced1858d2a70427bb3da4p@chr5:122434930..122434939, +
1.55e-98FFCP PHASE2:Hg19::chr8:43349847..43349852,+#_5be9c452e68ced1858d2a70427bb3da4p@chr8:43349847..43349852, +
1.55e-98FFCP PHASE2:Hg19::chr5:39892092..39892099,+#_5be9c452e68ced1858d2a70427bb3da4p@chr5:39892092..39892099, +
1.55e-98FFCP PHASE1:Hg19::chr10:78078199..78078208,+#_5be9c452e68ced1858d2a70427bb3da4p8@C10orf11
1.55e-98FFCP PHASE1:Hg19::chr8:48651813..48651830,-#_5be9c452e68ced1858d2a70427bb3da4p14@CEBPD
1.55e-98FFCP PHASE1:Hg19::chr3:112931366..112931373,-#_5be9c452e68ced1858d2a70427bb3da4p@chr3:112931366..112931373, -
1.55e-98FFCP PHASE2:Hg19::chr5:122434930..122434939,+#_5be9c452e68ced1858d2a70427bb3da4p@chr5:122434930..122434939, +
1.55e-98FFCP PHASE2:Hg19::chr10:79398656..79398666,-#_5be9c452e68ced1858d2a70427bb3da4p25@KCNMA1
1.55e-98FFCP PHASE2:Hg19::chr8:48651813..48651830,-#_5be9c452e68ced1858d2a70427bb3da4p14@CEBPD
1.16e-78FFCP PHASE2:Hg19::chr2:18695697..18695706,-#_a7272e415b6a1dece27c9e26d350a68bp@chr2:18695697..18695706, -
1.16e-78FFCP PHASE1:Hg19::chr2:18695697..18695706,-#_a7272e415b6a1dece27c9e26d350a68bp@chr2:18695697..18695706, -
2.74e-50FFCP PHASE1:Hg19::chr1:66031903..66031907,+#_7b158a2ac0951da74af2ec507999e313p@chr1:66031903..66031907, +
2.74e-50FFCP PHASE1:Hg19::chr4:154711058..154711075,+#_7b158a2ac0951da74af2ec507999e313p@chr4:154711058..154711075, +
2.74e-50FFCP PHASE1:Hg19::chr9:23524699..23524703,-#_7b158a2ac0951da74af2ec507999e313p@chr9:23524699..23524703, -
2.74e-50FFCP PHASE1:Hg19::chr3:147794257..147794262,+#_7b158a2ac0951da74af2ec507999e313p@chr3:147794257..147794262, +
2.74e-50FFCP PHASE2:Hg19::chr19:2309357..2309359,+#_7b158a2ac0951da74af2ec507999e313p@chr19:2309357..2309359, +
2.74e-50FFCP PHASE1:Hg19::chr8:43349758..43349771,+#_7b158a2ac0951da74af2ec507999e313p@chr8:43349758..43349771, +
2.74e-50FFCP PHASE2:Hg19::chr1:66031903..66031907,+#_7b158a2ac0951da74af2ec507999e313p@chr1:66031903..66031907, +
2.74e-50FFCP PHASE2:Hg19::chr4:154711058..154711075,+#_7b158a2ac0951da74af2ec507999e313p@chr4:154711058..154711075, +
2.74e-50FFCP PHASE2:Hg19::chr9:23524699..23524703,-#_7b158a2ac0951da74af2ec507999e313p@chr9:23524699..23524703, -
2.74e-50FFCP PHASE2:Hg19::chr3:147794257..147794262,+#_7b158a2ac0951da74af2ec507999e313p@chr3:147794257..147794262, +
2.74e-50FFCP PHASE2:Hg19::chr8:43349758..43349771,+#_7b158a2ac0951da74af2ec507999e313p@chr8:43349758..43349771, +
2.74e-50FFCP PHASE1:Hg19::chr7:115135068..115135092,-#_7b158a2ac0951da74af2ec507999e313p@chr7:115135068..115135092, -
2.74e-50FFCP PHASE1:Hg19::chr8:43349794..43349803,+#_7b158a2ac0951da74af2ec507999e313p@chr8:43349794..43349803, +
2.74e-50FFCP PHASE1:Hg19::chr16:73094120..73094122,-#_7b158a2ac0951da74af2ec507999e313p@chr16:73094120..73094122, -
2.74e-50FFCP PHASE1:Hg19::chr18:14221875..14221879,-#_7b158a2ac0951da74af2ec507999e313p@chr18:14221875..14221879, -
2.74e-50FFCP PHASE2:Hg19::chr8:43349794..43349803,+#_7b158a2ac0951da74af2ec507999e313p@chr8:43349794..43349803, +
2.74e-50FFCP PHASE2:Hg19::chr7:115135068..115135092,-#_7b158a2ac0951da74af2ec507999e313p@chr7:115135068..115135092, -
2.74e-50FFCP PHASE1:Hg19::chr8:72274182..72274188,-#_7b158a2ac0951da74af2ec507999e313p18@EYA1
2.74e-50FFCP PHASE2:Hg19::chr16:73094120..73094122,-#_7b158a2ac0951da74af2ec507999e313p@chr16:73094120..73094122, -
2.74e-50FFCP PHASE1:Hg19::chr19:2309357..2309359,+#_7b158a2ac0951da74af2ec507999e313p@chr19:2309357..2309359, +
2.74e-50FFCP PHASE2:Hg19::chr18:14221875..14221879,-#_7b158a2ac0951da74af2ec507999e313p@chr18:14221875..14221879, -
2.74e-50FFCP PHASE2:Hg19::chr8:72274182..72274188,-#_7b158a2ac0951da74af2ec507999e313p18@EYA1
4.52e-50FFCP PHASE2:Hg19::chr1:183775501..183775512,+#_2e6bd6d4e76ce658e65011b0c1ac9a50p13@RGL1
4.52e-50FFCP PHASE2:Hg19::chr11:44360838..44360846,+#_2e6bd6d4e76ce658e65011b0c1ac9a50p@chr11:44360838..44360846, +
4.52e-50FFCP PHASE1:Hg19::chr11:44360838..44360846,+#_2e6bd6d4e76ce658e65011b0c1ac9a50p@chr11:44360838..44360846, +
4.52e-50FFCP PHASE1:Hg19::chr1:65990750..65990756,+#_2e6bd6d4e76ce658e65011b0c1ac9a50p@chr1:65990750..65990756, +
4.52e-50FFCP PHASE2:Hg19::chr1:65990750..65990756,+#_2e6bd6d4e76ce658e65011b0c1ac9a50p@chr1:65990750..65990756, +
4.52e-50FFCP PHASE1:Hg19::chr1:183775501..183775512,+#_2e6bd6d4e76ce658e65011b0c1ac9a50p13@RGL1
4.49e-40FFCP PHASE1:Hg19::chr9:74167593..74167609,-#_5bcb78876d1236632ac82c5a7dc35b70p@chr9:74167593..74167609, -
4.49e-40FFCP PHASE2:Hg19::chr9:74167593..74167609,-#_5bcb78876d1236632ac82c5a7dc35b70p@chr9:74167593..74167609, -
3.28e-37FFCP PHASE1:Hg19::chr2:201521549..201521593,+#_09e94271aac40aafcdeae7f09a02c05bp@chr2:201521549..201521593, +
3.28e-37FFCP PHASE2:Hg19::chr2:201521549..201521593,+#_09e94271aac40aafcdeae7f09a02c05bp@chr2:201521549..201521593, +
3.61e-34FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_582abcc2bd38c89694d9fc1ae3eed36dp47@RBPJ
3.61e-34FFCP PHASE1:Hg19::chr4:154711263..154711272,+#_582abcc2bd38c89694d9fc1ae3eed36dp@chr4:154711263..154711272, +
3.61e-34FFCP PHASE1:Hg19::chr9:23524722..23524736,-#_582abcc2bd38c89694d9fc1ae3eed36dp@chr9:23524722..23524736, -
3.61e-34FFCP PHASE2:Hg19::chr4:154711263..154711272,+#_582abcc2bd38c89694d9fc1ae3eed36dp@chr4:154711263..154711272, +
3.61e-34FFCP PHASE2:Hg19::chr9:23524722..23524736,-#_582abcc2bd38c89694d9fc1ae3eed36dp@chr9:23524722..23524736, -
3.61e-34FFCP PHASE1:Hg19::chr9:23524772..23524783,-#_582abcc2bd38c89694d9fc1ae3eed36dp@chr9:23524772..23524783, -
3.61e-34FFCP PHASE2:Hg19::chr9:23524772..23524783,-#_582abcc2bd38c89694d9fc1ae3eed36dp@chr9:23524772..23524783, -
3.61e-34FFCP PHASE1:Hg19::chr3:112931461..112931474,-#_582abcc2bd38c89694d9fc1ae3eed36dp@chr3:112931461..112931474, -
3.61e-34FFCP PHASE1:Hg19::chr2:45715445..45715482,-#_582abcc2bd38c89694d9fc1ae3eed36dp@chr2:45715445..45715482, -
3.61e-34FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_582abcc2bd38c89694d9fc1ae3eed36dp47@RBPJ
3.61e-34FFCP PHASE2:Hg19::chr3:112931461..112931474,-#_582abcc2bd38c89694d9fc1ae3eed36dp@chr3:112931461..112931474, -
3.61e-34FFCP PHASE2:Hg19::chr2:45715445..45715482,-#_582abcc2bd38c89694d9fc1ae3eed36dp@chr2:45715445..45715482, -
5.04e-34FFCP PHASE2:Hg19::chr5:176047686..176047693,-#_a5877810db267f5218650cf3fb79003ap@chr5:176047686..176047693, -
5.04e-34FFCP PHASE1:Hg19::chr5:175223687..175223688,+#_a5877810db267f5218650cf3fb79003ap29@CPLX2
5.04e-34FFCP PHASE1:Hg19::chr1:1914706..1914716,-#_a5877810db267f5218650cf3fb79003ap@chr1:1914706..1914716, -
5.04e-34FFCP PHASE2:Hg19::chr17:53398728..53398764,+#_a5877810db267f5218650cf3fb79003ap@chr17:53398728..53398764, +
5.04e-34FFCP PHASE2:Hg19::chr5:175223687..175223688,+#_a5877810db267f5218650cf3fb79003ap29@CPLX2
5.04e-34FFCP PHASE2:Hg19::chr1:1914706..1914716,-#_a5877810db267f5218650cf3fb79003ap@chr1:1914706..1914716, -
5.04e-34FFCP PHASE1:Hg19::chr5:176047686..176047693,-#_a5877810db267f5218650cf3fb79003ap@chr5:176047686..176047693, -
5.04e-34FFCP PHASE1:Hg19::chr17:53398728..53398764,+#_a5877810db267f5218650cf3fb79003ap@chr17:53398728..53398764, +
7.05e-34FFCP PHASE2:Hg19::chr13:66878571..66878580,-#_9a137a171c9a7de7bdc00c1ca128fc58p@chr13:66878571..66878580, -
7.05e-34FFCP PHASE2:Hg19::chr2:44903688..44903705,+#_9a137a171c9a7de7bdc00c1ca128fc58p7@CAMKMT
7.05e-34FFCP PHASE1:Hg19::chr1:157069619..157069633,-#_9a137a171c9a7de7bdc00c1ca128fc58p3@ETV3L
7.05e-34FFCP PHASE1:Hg19::chr6:102487198..102487211,+#_9a137a171c9a7de7bdc00c1ca128fc58p@chr6:102487198..102487211, +
7.05e-34FFCP PHASE2:Hg19::chr1:157069619..157069633,-#_9a137a171c9a7de7bdc00c1ca128fc58p3@ETV3L
7.05e-34FFCP PHASE2:Hg19::chr6:102487198..102487211,+#_9a137a171c9a7de7bdc00c1ca128fc58p@chr6:102487198..102487211, +
7.05e-34FFCP PHASE1:Hg19::chr13:66878571..66878580,-#_9a137a171c9a7de7bdc00c1ca128fc58p@chr13:66878571..66878580, -
7.05e-34FFCP PHASE1:Hg19::chr20:36979501..36979520,-#_9a137a171c9a7de7bdc00c1ca128fc58p@chr20:36979501..36979520, -
7.05e-34FFCP PHASE2:Hg19::chr11:44360939..44360945,+#_9a137a171c9a7de7bdc00c1ca128fc58p@chr11:44360939..44360945, +
7.05e-34FFCP PHASE1:Hg19::chr11:44360939..44360945,+#_9a137a171c9a7de7bdc00c1ca128fc58p@chr11:44360939..44360945, +
7.05e-34FFCP PHASE2:Hg19::chr20:36979501..36979520,-#_9a137a171c9a7de7bdc00c1ca128fc58p@chr20:36979501..36979520, -
7.05e-34FFCP PHASE1:Hg19::chr2:44903688..44903705,+#_9a137a171c9a7de7bdc00c1ca128fc58p7@CAMKMT
4.04e-31FFCP PHASE1:Hg19::chr6:160679846..160679859,-#_c7deeef6991d7f7aa1c3844e07844484p1@SLC22A2
4.04e-31FFCP PHASE2:Hg19::chr6:160679846..160679859,-#_c7deeef6991d7f7aa1c3844e07844484p1@SLC22A2
1.02e-30FFCP PHASE1:Hg19::chr8:17351823..17351832,+#_54dadf37bf4f2b39f07234dc9090d941p@chr8:17351823..17351832, +
1.02e-30FFCP PHASE2:Hg19::chr8:17351823..17351832,+#_54dadf37bf4f2b39f07234dc9090d941p@chr8:17351823..17351832, +
4.08e-26FFCP PHASE1:Hg19::chr20:4904851..4904855,-#_fc4f11547d4b8c3715c3e867b392294dp@chr20:4904851..4904855, -
4.08e-26FFCP PHASE2:Hg19::chr20:4904851..4904855,-#_fc4f11547d4b8c3715c3e867b392294dp@chr20:4904851..4904855, -

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