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{{UBERON
{{UBERON
|id=UBERON:0007285
|alt_id=
|name=presumptive paraxial mesoderm
|namespace=
|def=
|xref=EFO:0003443;;TAO:0000591;;XAO:0004134;;ZFA:0000591
|is_a=UBERON:0006598
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007285
|is_a=UBERON:0006598
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=presumptive paraxial mesoderm
|namespace=
|obo_creation_date=
|part_of=UBERON:0000926
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=EFO:0003443;;TAO:0000591;;XAO:0004134;;ZFA:0000591
}}
}}

Revision as of 11:43, 12 September 2014

Name:presumptive paraxial mesoderm
Xrefs:
links:

EFO:0003443
TAO:0000591
XAO:0004134

ZFA:0000591

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006598(presumptive structure)
part_of:UBERON:0000926(mesoderm)



Children

develops from:UBERON:0003077 (paraxial mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007285 (presumptive paraxial mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.34e-47FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_da6469b2e3e79e899c3a1dd89721a96bp@chrX:160838683..160838694, +
1.34e-47FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_da6469b2e3e79e899c3a1dd89721a96bp@chrX:160838683..160838694, +
8.78e-44FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_ec96ec97f2abae26dd98be8534b14db4p8@ARHGAP22
8.78e-44FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_ec96ec97f2abae26dd98be8534b14db4p8@ARHGAP22
5.06e-41FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_3160e56526f7773f632f48e47eddcd91p@chrX:65748600..65748616, +
5.06e-41FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_3160e56526f7773f632f48e47eddcd91p@chr12:105433069..105433075, -
5.06e-41FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_3160e56526f7773f632f48e47eddcd91p@chrX:65748600..65748616, +
5.06e-41FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_3160e56526f7773f632f48e47eddcd91p@chr12:105433069..105433075, -
3.83e-40FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_610203e0bf35447471bd0e0ba6e0dc4fp@chr6:53359400..53359406, +
3.83e-40FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_610203e0bf35447471bd0e0ba6e0dc4fp@chr6:53359400..53359406, +
6.64e-40FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_f13ee24a66c598a22742a401741fd215p@chrX:160838787..160838800, +
6.64e-40FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_f13ee24a66c598a22742a401741fd215p@chrX:160838787..160838800, +
1.1e-38FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_82c312933ff0da6ffc915ef6b7907db8p4@ARHGAP22
1.1e-38FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_82c312933ff0da6ffc915ef6b7907db8p4@ARHGAP22
2.48e-38FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_1a1b3873e9f8695dc7dba0695cea4a77p@chr9:35685631..35685657, +
2.48e-38FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_1a1b3873e9f8695dc7dba0695cea4a77p@chr9:35685631..35685657, +
9.32e-38FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_da24669f43b612f5afd6cfab0a285defp2@SASH1
9.32e-38FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_da24669f43b612f5afd6cfab0a285defp2@SASH1
6.65e-36FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_005a4f8635c8a95dfdb10bf20f0f053dp@chr11:81849982..81850000, +
6.65e-36FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_005a4f8635c8a95dfdb10bf20f0f053dp@chr11:81849982..81850000, +
6.84e-36FFCP PHASE1:Hg19::chr10:49813013..49813032,-#_4de02469abeb6c0b6ae7dd7f725edfe2p3@ARHGAP22
6.84e-36FFCP PHASE2:Hg19::chr10:49813013..49813032,-#_4de02469abeb6c0b6ae7dd7f725edfe2p3@ARHGAP22
1.05e-34FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_e6bb6147b70e97fd2f2af97745869e15p2@RCN3
1.05e-34FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_e6bb6147b70e97fd2f2af97745869e15p2@RCN3
9.31e-34FFCP PHASE1:Hg19::chr9:35685445..35685517,+#_39a033c066c4639b8803677984d42363p@chr9:35685445..35685517, +
9.31e-34FFCP PHASE2:Hg19::chr9:35685445..35685517,+#_39a033c066c4639b8803677984d42363p@chr9:35685445..35685517, +
1.65e-33FFCP PHASE1:Hg19::chr9:35684475..35684520,+#_00aea23b2538efc027ef19b9817c270dp@chr9:35684475..35684520, +
1.65e-33FFCP PHASE2:Hg19::chr9:35684475..35684520,+#_00aea23b2538efc027ef19b9817c270dp@chr9:35684475..35684520, +
1.81e-33FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_a99b3c583c36075ea24b0b98c8dd3984p@chr13:119579287..119579292, +
1.81e-33FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_a99b3c583c36075ea24b0b98c8dd3984p@chr13:119579287..119579292, +
2.11e-33FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_14c8755052ffc31348e356e350b5b235p@chr17:14813242..14813246, -
2.11e-33FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_14c8755052ffc31348e356e350b5b235p@chr17:14813242..14813246, -
2.37e-33FFCP PHASE2:Hg19::chr14:94595800..94595811,-#_f27d7d5adfd980cfd618ba042a144c13p3@IFI27L2
2.37e-33FFCP PHASE1:Hg19::chr14:94595800..94595811,-#_f27d7d5adfd980cfd618ba042a144c13p3@IFI27L2
3.52e-33FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_38ec70fc31d01c0386236432818ef1ffp2@LRRC17
3.52e-33FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_38ec70fc31d01c0386236432818ef1ffp2@LRRC17
9.55e-33FFCP PHASE2:Hg19::chr7:102553430..102553456,+#_2ed32b99d4590e08363f5c247c28c6abp1@LRRC17
9.55e-33FFCP PHASE1:Hg19::chr7:102553430..102553456,+#_2ed32b99d4590e08363f5c247c28c6abp1@LRRC17
1.29e-32FFCP PHASE1:Hg19::chr9:35689148..35689192,+#_fe60181b31431434009429bf4e0a0e8ep@chr9:35689148..35689192, +
1.29e-32FFCP PHASE2:Hg19::chr9:35689148..35689192,+#_fe60181b31431434009429bf4e0a0e8ep@chr9:35689148..35689192, +
3.07e-32FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_8b3294877097a5814b72986fd63e6af6p@chrX:160840048..160840057, +
3.07e-32FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_8b3294877097a5814b72986fd63e6af6p@chrX:160840025..160840037, +
3.07e-32FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_8b3294877097a5814b72986fd63e6af6p@chrX:160823859..160823870, +
3.07e-32FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_8b3294877097a5814b72986fd63e6af6p@chrX:160823859..160823870, +
3.07e-32FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_8b3294877097a5814b72986fd63e6af6p@chrX:160840025..160840037, +
3.07e-32FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_8b3294877097a5814b72986fd63e6af6p@chrX:160840048..160840057, +
4.43e-32FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_a4e3bf3b21f7f0dbe1522223023960a3p4@Gpr39
4.43e-32FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_a4e3bf3b21f7f0dbe1522223023960a3p4@Gpr39
6.91e-32FFCP PHASE1:Hg19::chr21:47518695..47518709,+#_bb220e8e4dc2dab4089c020b9590b6aap6@COL6A2
6.91e-32FFCP PHASE2:Hg19::chr21:47518695..47518709,+#_bb220e8e4dc2dab4089c020b9590b6aap6@COL6A2
1.87e-31FFCP PHASE1:Hg19::chr21:47518637..47518688,+#_22050b92f8eb4197e7d3ff130018e91fp2@COL6A2
1.87e-31FFCP PHASE2:Hg19::chr21:47518637..47518688,+#_22050b92f8eb4197e7d3ff130018e91fp2@COL6A2
1.97e-31FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_5d2ea63f73f822d48e2333978d925255p@chr4:74703497..74703511, +
1.97e-31FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_5d2ea63f73f822d48e2333978d925255p@chr4:74703497..74703511, +
2.69e-31FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_a38193267c3b9feb8057ec3c5304baf6p@chr2:134548872..134548879, -
2.69e-31FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_a38193267c3b9feb8057ec3c5304baf6p@chr2:134548872..134548879, -
5.9e-31FFCP PHASE1:Hg19::chr9:35685273..35685313,+#_c20308c6ac2a9537d176b35a963439fcp@chr9:35685273..35685313, +
5.9e-31FFCP PHASE2:Hg19::chr9:35685273..35685313,+#_c20308c6ac2a9537d176b35a963439fcp@chr9:35685273..35685313, +
1.59e-30FFCP PHASE2:Hg19::chr12:53491743..53491754,+#_56e28fef9c1705ab267c1c03e68c593dp1@AK074416
1.59e-30FFCP PHASE1:Hg19::chr12:53491743..53491754,+#_56e28fef9c1705ab267c1c03e68c593dp1@AK074416
2.29e-30FFCP PHASE2:Hg19::chr2:33359687..33359717,+#_e83c67bb520a67fd3a9423bea863eb84p2@LTBP1
2.29e-30FFCP PHASE1:Hg19::chr2:33359687..33359717,+#_e83c67bb520a67fd3a9423bea863eb84p2@LTBP1
4.87e-30FFCP PHASE1:Hg19::chr7:100773764..100773799,-#_4a62a3ba0ad586cdced33ee79f88acb5p@chr7:100773764..100773799, -
4.87e-30FFCP PHASE2:Hg19::chr7:100773764..100773799,-#_4a62a3ba0ad586cdced33ee79f88acb5p@chr7:100773764..100773799, -
5.03e-30FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_19eee7c5a81d3aef3262b1f6fb2a5c96p2@ELTD1
5.03e-30FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_19eee7c5a81d3aef3262b1f6fb2a5c96p2@ELTD1
5.09e-30FFCP PHASE1:Hg19::chr7:93516035..93516056,+#_65e2596f0cdd29917f78315da09c08edp1@CU675118
5.09e-30FFCP PHASE2:Hg19::chr7:93516035..93516056,+#_65e2596f0cdd29917f78315da09c08edp1@CU675118
1.0e-29FFCP PHASE2:Hg19::chr21:47532318..47532355,+#_8bfb94a81bb9385f37c0f9c0b6b63bf0p8@COL6A2
1.0e-29FFCP PHASE1:Hg19::chr21:47532318..47532355,+#_8bfb94a81bb9385f37c0f9c0b6b63bf0p8@COL6A2
1.82e-29FFCP PHASE2:Hg19::chr7:100773872..100773904,-#_65296c6626c14d9f6a851cc1e6634b66p@chr7:100773872..100773904, -
1.82e-29FFCP PHASE1:Hg19::chr7:100773872..100773904,-#_65296c6626c14d9f6a851cc1e6634b66p@chr7:100773872..100773904, -
1.95e-29FFCP PHASE2:Hg19::chr21:47542827..47542859,-#_8a2228c0470cd681bc16471abdd9ca78p@chr21:47542827..47542859, -
1.95e-29FFCP PHASE1:Hg19::chr21:47542827..47542859,-#_8a2228c0470cd681bc16471abdd9ca78p@chr21:47542827..47542859, -
2.28e-29FFCP PHASE1:Hg19::chr12:53492630..53492661,+#_396ca408e0ac99d341fd687147a6f961p4@IGFBP6
2.28e-29FFCP PHASE2:Hg19::chr12:53492630..53492661,+#_396ca408e0ac99d341fd687147a6f961p4@IGFBP6
2.31e-29FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_c6c2441ffa7f51bcb100208709ab3421p@chr11:102661517..102661541, -
2.31e-29FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_c6c2441ffa7f51bcb100208709ab3421p@chr11:102661517..102661541, -
3.61e-29FFCP PHASE2:Hg19::chr4:86699834..86699889,+#_067f42bb4997112f9362d6938ef74fbfp5@ARHGAP24
3.61e-29FFCP PHASE1:Hg19::chr4:86699834..86699889,+#_067f42bb4997112f9362d6938ef74fbfp5@ARHGAP24
5.21e-29FFCP PHASE2:Hg19::chr21:47532107..47532192,+#_bcb4c537dc08f5f40c79532fe361e8fdp5@COL6A2
5.21e-29FFCP PHASE1:Hg19::chr21:47532107..47532192,+#_bcb4c537dc08f5f40c79532fe361e8fdp5@COL6A2
5.71e-29FFCP PHASE2:Hg19::chr4:174430774..174430814,+#_fe7223d0f07ba4f8fd0cd0dc1e862485p@chr4:174430774..174430814, +
5.71e-29FFCP PHASE1:Hg19::chr4:174430774..174430814,+#_fe7223d0f07ba4f8fd0cd0dc1e862485p@chr4:174430774..174430814, +
5.79e-29FFCP PHASE1:Hg19::chr4:74702338..74702349,+#_578fcb1bc8fbbde9b6fb553cd487efa1p2@CXCL6
5.79e-29FFCP PHASE2:Hg19::chr4:74702338..74702349,+#_578fcb1bc8fbbde9b6fb553cd487efa1p2@CXCL6
7.21e-29FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_51f41033486e8fdfa522b6962741b8a4p@chr1:127574253..127574264, +
7.21e-29FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_51f41033486e8fdfa522b6962741b8a4p@chr1:127574253..127574264, +
7.95e-29FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_78e9bf5516b86b1fd4c233340e520361p11@Fam198b
7.95e-29FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_78e9bf5516b86b1fd4c233340e520361p11@Fam198b
8.93e-29FFCP PHASE1:Hg19::chr9:35685692..35685745,-#_73cd5687fd01c12ed130f06213e99847p2@TPM2
8.93e-29FFCP PHASE2:Hg19::chr9:35685692..35685745,-#_73cd5687fd01c12ed130f06213e99847p2@TPM2
9.39e-29FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_37091a8fec2c0dd3f8255d894e53bd7ep7@Gpr39
9.39e-29FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_37091a8fec2c0dd3f8255d894e53bd7ep7@Gpr39
1.07e-28FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_5586a2ae912f1e2bec1d9954c15c0ea0p11@Gpr39
1.07e-28FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_5586a2ae912f1e2bec1d9954c15c0ea0p11@Gpr39
1.11e-28FFCP PHASE1:Hg19::chr17:77020171..77020195,+#_b08025c2e7d231ec1d099a5428229da9p3@C1QTNF1
1.11e-28FFCP PHASE2:Hg19::chr17:77020171..77020195,+#_b08025c2e7d231ec1d099a5428229da9p3@C1QTNF1
1.22e-28FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_63fbf25f52c0d802441fa1d8803f480dp@chrX:160839768..160839780, +
1.22e-28FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_63fbf25f52c0d802441fa1d8803f480dp@chrX:160839768..160839780, +

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