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{{UBERON
{{UBERON
|id=UBERON:0007273
|alt_id=
|name=pelvic appendage skeleton
|namespace=
|def="The collection of all skeletal elements in a pelvic appendage region." [UBERON:cjm]
|xref=
|is_a=UBERON:0004120;;UBERON:0010912
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The collection of all skeletal elements in a pelvic appendage region." [UBERON:cjm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007273
|is_a=UBERON:0011582
|is_obsolete=
|located_in=
|located_in=
|name=pelvic appendage skeleton
|namespace=
|obo_creation_date=
|part_of=UBERON:0004709
|part_of=UBERON:0004709
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 11:42, 12 September 2014

Name:pelvic appendage skeleton
Definition:"The collection of all skeletal elements in a pelvic appendage region." [UBERON:cjm]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0011582(paired limb/fin skeleton)
part_of:UBERON:0004709(pelvic appendage)



Children

is a:UBERON:0001441 (hindlimb skeleton)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007273 (pelvic appendage skeleton), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.4e-49FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_cbdd009d5ae8fc767af59734fd6ccc91p26@Myo18a
3.4e-49FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_cbdd009d5ae8fc767af59734fd6ccc91p26@Myo18a
4.96e-49FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_79db1e51ede2c12c94a492b5c524128cp@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_79db1e51ede2c12c94a492b5c524128cp@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_79db1e51ede2c12c94a492b5c524128cp@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_79db1e51ede2c12c94a492b5c524128cp@chr9:21934585..21934591, -
4.96e-49FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_79db1e51ede2c12c94a492b5c524128cp@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_79db1e51ede2c12c94a492b5c524128cp@chr9:21934585..21934591, -
3.15e-44FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_f0b4e109de7b487cbd7a71aa8b48ac31p@chr6:51525810..51525817, +
3.15e-44FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_f0b4e109de7b487cbd7a71aa8b48ac31p@chr6:51525810..51525817, +
9.78e-40FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_2d232bdae6ccd18c90c62992c8f0f2aep@chr19:4876870..4876880, -
9.78e-40FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_2d232bdae6ccd18c90c62992c8f0f2aep@chr19:4876870..4876880, -
1.15e-39FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_cb20eb19b14caf8b86854a3ebe8ef022p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_cb20eb19b14caf8b86854a3ebe8ef022p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_cb20eb19b14caf8b86854a3ebe8ef022p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_cb20eb19b14caf8b86854a3ebe8ef022p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_cb20eb19b14caf8b86854a3ebe8ef022p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_cb20eb19b14caf8b86854a3ebe8ef022p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_cb20eb19b14caf8b86854a3ebe8ef022p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_cb20eb19b14caf8b86854a3ebe8ef022p@chr6:4490674..4490679, +
1.55e-39FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_a8effd52210a14eff395205233093b2cp@chr1:174143249..174143260, -
1.55e-39FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_a8effd52210a14eff395205233093b2cp@chr1:174143249..174143260, -
3.03e-39FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_d850d731a58221d4c2d9019f953073bcp@chr6:51525869..51525891, +
3.03e-39FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_d850d731a58221d4c2d9019f953073bcp@chr6:51525869..51525891, +
9.31e-39FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_60fe5dc85a8b88b8fe68e910f871cb78p3@Asb16
9.31e-39FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_60fe5dc85a8b88b8fe68e910f871cb78p3@Asb16
2.41e-35FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_c759966b4c0b679df15f8a7e2f3846b7p@chr7:133604286..133604297, -
2.41e-35FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_c759966b4c0b679df15f8a7e2f3846b7p@chr7:133604286..133604297, -
2.95e-35FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_f08bfc2e2d1b8b3f81fe490c106d6375p5@Pla2g5
2.95e-35FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_f08bfc2e2d1b8b3f81fe490c106d6375p5@Pla2g5
9.53e-34FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_3b9d022cc34ddf2f822ad3b9e6de31e4p2@uc009mdq.1
9.53e-34FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_3b9d022cc34ddf2f822ad3b9e6de31e4p2@uc009mdq.1
1.23e-33FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_afcba6cdd47b475cb3e73ccae816e9b5p3@Mmp9
1.23e-33FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_afcba6cdd47b475cb3e73ccae816e9b5p3@Mmp9
1.58e-33FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_33ee0a572133ece48465c5eccf6acda5p2@Oscar
1.58e-33FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_33ee0a572133ece48465c5eccf6acda5p2@Oscar
1.58e-33FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_33ee0a572133ece48465c5eccf6acda5p@chr1:166815111..166815121, -
1.58e-33FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_33ee0a572133ece48465c5eccf6acda5p@chr1:166815111..166815121, -
2.04e-33FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_0078476513dfea7fb605458ae914b9e2p4@Lipc
2.04e-33FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_0078476513dfea7fb605458ae914b9e2p@chr11:75409652..75409664, +
2.04e-33FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_0078476513dfea7fb605458ae914b9e2p@chr11:75409652..75409664, +
2.04e-33FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_0078476513dfea7fb605458ae914b9e2p4@Lipc
3.38e-33FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_12970b629bd7927ac42a624673c72176p6@Sp7
3.38e-33FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_12970b629bd7927ac42a624673c72176p6@Sp7
7.17e-33FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_1874db1e1ecd20e3f99b382fbbf26113p@chr8:126415826..126415839, +
7.17e-33FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_1874db1e1ecd20e3f99b382fbbf26113p@chr8:126415826..126415839, +
7.17e-33FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_1874db1e1ecd20e3f99b382fbbf26113p@chr18:76271498..76271508, +
7.17e-33FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_1874db1e1ecd20e3f99b382fbbf26113p@chr18:76271498..76271508, +
2.67e-30FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_ab3972a2a60cf007e6b55b967a457f00p@chr2:32482387..32482399, +
2.67e-30FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_ab3972a2a60cf007e6b55b967a457f00p@chr2:32482387..32482399, +
1.1e-29FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_cc34ce0e6b6d51ddb0b49cca8aefdd3cp@chr12:70396969..70396979, +
1.1e-29FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_cc34ce0e6b6d51ddb0b49cca8aefdd3cp@chr12:70396969..70396979, +
1.1e-29FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_cc34ce0e6b6d51ddb0b49cca8aefdd3cp@chr15:58649683..58649688, -
1.1e-29FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_cc34ce0e6b6d51ddb0b49cca8aefdd3cp@chr15:58649683..58649688, -
1.46e-29FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_39bbf76b8c39003955da196079b8281bp@chr7:133590998..133591009, -
1.46e-29FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_39bbf76b8c39003955da196079b8281bp@chr7:133590998..133591009, -
1.73e-29FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_9f4ea12a367e2b26d35767144f49bc43p2@Myoz3
1.73e-29FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_9f4ea12a367e2b26d35767144f49bc43p2@Myoz3
2.42e-29FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_771696e226bb5ee333baa94483ade808p2@Myh4
2.42e-29FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_771696e226bb5ee333baa94483ade808p2@Myh4
7.46e-29FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_3312e9d365b0e0d4db682ca1e594b2f4p@chr1:57155729..57155740, -
7.46e-29FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_3312e9d365b0e0d4db682ca1e594b2f4p@chr1:57155729..57155740, -
9.26e-29FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_0c4656d6ca5b3d97253c89c6b15ef47cp@chr11:67056544..67056589, -
9.26e-29FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_0c4656d6ca5b3d97253c89c6b15ef47cp1@Msmp
9.26e-29FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_0c4656d6ca5b3d97253c89c6b15ef47cp@chr11:67056544..67056589, -
9.26e-29FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_0c4656d6ca5b3d97253c89c6b15ef47cp1@Msmp
1.15e-28FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_5265cdd7807b817363ba32b864d0959ap@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_5265cdd7807b817363ba32b864d0959ap@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_5265cdd7807b817363ba32b864d0959ap@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_5265cdd7807b817363ba32b864d0959ap@chr6:90552017..90552024, +
1.43e-28FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_c467f6f274fee4cfec725fcf20651eaep@chr6:34436258..34436292, +
1.43e-28FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_c467f6f274fee4cfec725fcf20651eaep@chr6:34436258..34436292, +
2.2e-28FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_4e3674f1c3551c0c51f082a262b8534fp@chr11:67069796..67069817, -
2.2e-28FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_4e3674f1c3551c0c51f082a262b8534fp@chr11:67069796..67069817, -
2.72e-28FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_6a3aff46039b539d6ae337617620f9d7p@chr8:107702369..107702386, +
2.72e-28FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_6a3aff46039b539d6ae337617620f9d7p@chr8:107702369..107702386, +
3.45e-28FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_7ee5488bf67be80032f14bee9ceedc9dp1@Siglec15
3.45e-28FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_7ee5488bf67be80032f14bee9ceedc9dp1@Siglec15
6.5e-28FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_0c43f9c974a2e515ca815d62dc948c0ep6@Atp2a1
6.5e-28FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_0c43f9c974a2e515ca815d62dc948c0ep6@Atp2a1
8.9e-28FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_14e6423d316c3c8fcd6ac262c8f0f0e2p7@Atp2a1
8.9e-28FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_14e6423d316c3c8fcd6ac262c8f0f0e2p7@Atp2a1
1.42e-27FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_7a08db5e70bd3a078a3723624b17608cp@chr7:133592162..133592188, -
1.42e-27FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_7a08db5e70bd3a078a3723624b17608cp@chr7:133592162..133592188, -
1.42e-27FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_7a08db5e70bd3a078a3723624b17608cp@chr7:133600635..133600663, +
1.42e-27FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_7a08db5e70bd3a078a3723624b17608cp@chr7:133600635..133600663, +
6.75e-27FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_1788280b8d7b37daaed873174b179f4ap4@Sgca
6.75e-27FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_1788280b8d7b37daaed873174b179f4ap4@Sgca
1.66e-26FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_7e0a6048362bccc8b2091026a76a9c9cp1@Mepe
1.66e-26FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_7e0a6048362bccc8b2091026a76a9c9cp1@Mepe
3.47e-26FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_469c4a3106fd1e8a8eb945ab8098575ep@chr12:81581216..81581231, +
3.47e-26FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_469c4a3106fd1e8a8eb945ab8098575ep@chr12:81581216..81581231, +
3.47e-26FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_469c4a3106fd1e8a8eb945ab8098575ep2@Tm4sf19
3.47e-26FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_469c4a3106fd1e8a8eb945ab8098575ep2@Tm4sf19
1.12e-25FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_6b22140f90f9226e5ca4aa8b4feea6acp5@Col11a2
1.12e-25FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_6b22140f90f9226e5ca4aa8b4feea6acp5@Col11a2
1.12e-25FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_6b22140f90f9226e5ca4aa8b4feea6acp@chr15:97806574..97806585, -
1.12e-25FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_6b22140f90f9226e5ca4aa8b4feea6acp@chr15:97806574..97806585, -
1.36e-25FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_090347f3f1bcfabfc6013c52bd987478p@chr2:180890942..180890956, -
1.36e-25FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_090347f3f1bcfabfc6013c52bd987478p2@Siglec15

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