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{{UBERON
{{UBERON
|id=UBERON:0002294
|alt_id=UBERON:FMA_79646-MA_0001273
|name=biliary system
|namespace=
|def="Anatomical system that consists of the organs and ducts (bile ducts, gallbladder, and associated structures) that are involved in the production and transportation of bile." [Wikipedia:Biliary_system]
|xref=FMA:79646;;http://upload.wikimedia.org/wikipedia/commons/thumb/5/5d/Digestive_system_showing_bile_duct.png/200px-Digestive_system_showing_bile_duct.png;;SCTID:361354009
|is_a=UBERON:0000467
|synonym="biliary apparatus" EXACT []
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_79646-MA_0001273
|disjoint_from=UBERON:0002330;;UBERON:0002390;;UBERON:0002405;;UBERON:0002416;;UBERON:0002423;;UBERON:0004456
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Anatomical system that consists of the organs and ducts (bile ducts, gallbladder, and associated structures) that are involved in the production and transportation of bile." [Wikipedia:Biliary_system]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=UBERON:0002330;;UBERON:0002390;;UBERON:0002405;;UBERON:0002416;;UBERON:0002423;;UBERON:0004456
|has_quality=
|has_quality=
|id=UBERON:0002294
|is_a=UBERON:0000467
|is_obsolete=
|located_in=
|located_in=
|name=biliary system
|namespace=
|obo_creation_date=
|part_of=UBERON:0002423
|part_of=UBERON:0002423
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="biliary apparatus" EXACT []
|union_of=
|xref=FMA:79646;;http://upload.wikimedia.org/wikipedia/commons/thumb/5/5d/Digestive_system_showing_bile_duct.png/200px-Digestive_system_showing_bile_duct.png;;SCTID:361354009
}}
}}

Revision as of 11:13, 12 September 2014

Name:biliary system
Definition:"Anatomical system that consists of the organs and ducts (bile ducts, gallbladder, and associated structures) that are involved in the production and transportation of bile." [Wikipedia:Biliary_system]
Xrefs:
links:

FMA:79646
[ 200px-Digestive_system_showing_bile_duct.png 200px-Digestive_system_showing_bile_duct.png]

SCTID:361354009
Synonyms: "biliary apparatus" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_79646-MA_0001273
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system)
disjoint_from:UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)
part_of:UBERON:0002423(hepatobiliary system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system)
part of:UBERON:0001173 (biliary tree),UBERON:0002394 (bile duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002294 (biliary system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE1:Mm9::chr10:117419958..117419964,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr8:11183699..11183703,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:11183699..11183703, -
3.07e-86FFCP PHASE1:Mm9::chr5:53111093..53111095,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE1:Mm9::chr16:28911901..28911906,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr16:28911901..28911906, -
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr8:127816016..127816021,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE2:Mm9::chr5:53111093..53111095,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106363..35106372,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr10:60279719..60279737,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr8:11183699..11183703,-#_ec700c5f8c4a9b77e8d490cfed8cbd04p@chr8:11183699..11183703, -

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