Personal tools

CL:0005022: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{CL
{{CL
|id=CL:0005022
|alt_id=
|name=vascular lymphangioblast
|namespace=cell
|def="Lymphatic progenitor cells, derived from the veins, that give rise to lymphatic endothelial cells." [CL:CVS]
|xref=
|is_a=CL:0005020
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=Ceri
|created_by=Ceri
|obo_creation_date=2012-01-12T05:21:09Z
|def="Lymphatic progenitor cells, derived from the veins, that give rise to lymphatic endothelial cells." [CL:CVS]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0005022
|is_a=CL:0005020
|is_obsolete=
|located_in=
|located_in=
|name=vascular lymphangioblast
|namespace=cell
|obo_creation_date=2012-01-12T05:21:09Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:31, 12 September 2014

Name:vascular lymphangioblast
Namespace:cell
Definition:"Lymphatic progenitor cells, derived from the veins, that give rise to lymphatic endothelial cells." [CL:CVS]
Created by:Ceri
Creation date:2012-01-12T05:21:09Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0005020(lymphangioblast)



Children


develops from:CL:0002138 (endothelial cell of lymphatic vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0005022 (vascular lymphangioblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.07e-135FFCP PHASE1:Hg19::chr9:13432964..13432971,-#_3a69da6cb18d3191672dbed7bc799defp@chr9:13432964..13432971, -
1.07e-135FFCP PHASE2:Hg19::chr9:13432964..13432971,-#_3a69da6cb18d3191672dbed7bc799defp@chr9:13432964..13432971, -
5.17e-105FFCP PHASE1:Hg19::chr1:65344872..65344880,-#_55e2f78bbee4d51913d2e9956e71b297p15@JAK1
5.17e-105FFCP PHASE2:Hg19::chr1:65344872..65344880,-#_55e2f78bbee4d51913d2e9956e71b297p15@JAK1
5.07e-102FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_e1c9f48073377d9024daee6d90067b6ap@chr3:30560368..30560379, +
5.07e-102FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_e1c9f48073377d9024daee6d90067b6ap@chr3:30560368..30560379, +
1.86e-98FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_ed7f815b01395cfd06a0ddd680b1d80fp@chr17:28534912..28534942, -
1.86e-98FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_ed7f815b01395cfd06a0ddd680b1d80fp@chr17:28534912..28534942, -
3.73e-91FFCP PHASE2:Hg19::chr2:56149881..56149899,-#_2dea665f8ea081e82681b330c5eeaf71p14@EFEMP1
3.73e-91FFCP PHASE1:Hg19::chr2:56149881..56149899,-#_2dea665f8ea081e82681b330c5eeaf71p14@EFEMP1
3.34e-87FFCP PHASE2:Hg19::chr19:48613876..48613886,-#_2b8bb1b47821b81a49e3b1ed32b0070fp7@PLA2G4C
3.34e-87FFCP PHASE1:Hg19::chr19:48613876..48613886,-#_2b8bb1b47821b81a49e3b1ed32b0070fp7@PLA2G4C
1.6e-85FFCP PHASE1:Hg19::chr6:74848034..74848043,+#_ae86cc59c0db6be2091684c0fb41c55ep@chr6:74848034..74848043, +
1.6e-85FFCP PHASE2:Hg19::chr6:74848034..74848043,+#_ae86cc59c0db6be2091684c0fb41c55ep@chr6:74848034..74848043, +
1.48e-75FFCP PHASE2:Hg19::chr6:5054373..5054392,-#_5c657924fbecdca73e1468125f134134p1@AK126470
1.48e-75FFCP PHASE1:Hg19::chr6:5054373..5054392,-#_5c657924fbecdca73e1468125f134134p1@AK126470
2.17e-75FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_0a22c8cd45a518454f1d69624d0d95d3p25@CD36
2.17e-75FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_0a22c8cd45a518454f1d69624d0d95d3p25@CD36
2.63e-75FFCP PHASE2:Hg19::chr3:145968441..145968451,-#_a830777a0ce5b1b6a9a71c18644f5d17p17@PLSCR4
2.63e-75FFCP PHASE1:Hg19::chr3:145968441..145968451,-#_a830777a0ce5b1b6a9a71c18644f5d17p17@PLSCR4
3.19e-75FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_304578bb5b9fdf2ad1c8841167dd5145p17@RASGRP3
3.19e-75FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_304578bb5b9fdf2ad1c8841167dd5145p17@RASGRP3
3.86e-75FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_c040df21770af5586ecb6fbbb9526787p2@ENST00000428006
3.86e-75FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_c040df21770af5586ecb6fbbb9526787p2@ENST00000428006
2.58e-74FFCP PHASE1:Hg19::chr17:28534879..28534889,-#_fa5c0b223569234a56fdbdad306d8b07p@chr17:28534879..28534889, -
2.58e-74FFCP PHASE2:Hg19::chr12:46807404..46807413,+#_fa5c0b223569234a56fdbdad306d8b07p@chr12:46807404..46807413, +
2.58e-74FFCP PHASE1:Hg19::chr12:46807404..46807413,+#_fa5c0b223569234a56fdbdad306d8b07p@chr12:46807404..46807413, +
2.58e-74FFCP PHASE2:Hg19::chr17:28534879..28534889,-#_fa5c0b223569234a56fdbdad306d8b07p@chr17:28534879..28534889, -
4.26e-74FFCP PHASE2:Hg19::chr7:79998905..79998917,+#_0a90cf9a1db45e0ba5b843d471beffd9p26@CD36
4.26e-74FFCP PHASE1:Hg19::chr7:79998905..79998917,+#_0a90cf9a1db45e0ba5b843d471beffd9p26@CD36
1.77e-72FFCP PHASE2:Hg19::chr8:30300216..30300245,+#_aa8d773f11501760824591531b22d577p10@RBPMS
1.77e-72FFCP PHASE1:Hg19::chr8:30300216..30300245,+#_aa8d773f11501760824591531b22d577p10@RBPMS
2.83e-66FFCP PHASE1:Hg19::chr2:33661526..33661535,+#_83904f81ca4df006e24b19c154ac0560p23@RASGRP3
2.83e-66FFCP PHASE2:Hg19::chr11:108794408..108794422,+#_83904f81ca4df006e24b19c154ac0560p@chr11:108794408..108794422, +
2.83e-66FFCP PHASE1:Hg19::chr1:66723029..66723041,+#_83904f81ca4df006e24b19c154ac0560p54@PDE4B
2.83e-66FFCP PHASE1:Hg19::chr11:108794408..108794422,+#_83904f81ca4df006e24b19c154ac0560p@chr11:108794408..108794422, +
2.83e-66FFCP PHASE2:Hg19::chr17:75873825..75873826,+#_83904f81ca4df006e24b19c154ac0560p@chr17:75873825..75873826, +
2.83e-66FFCP PHASE2:Hg19::chr11:108794429..108794441,+#_83904f81ca4df006e24b19c154ac0560p@chr11:108794429..108794441, +
2.83e-66FFCP PHASE1:Hg19::chr11:108794429..108794441,+#_83904f81ca4df006e24b19c154ac0560p@chr11:108794429..108794441, +
2.83e-66FFCP PHASE2:Hg19::chr4:114238344..114238353,+#_83904f81ca4df006e24b19c154ac0560p58@ANK2
2.83e-66FFCP PHASE1:Hg19::chr17:75873825..75873826,+#_83904f81ca4df006e24b19c154ac0560p@chr17:75873825..75873826, +
2.83e-66FFCP PHASE1:Hg19::chr4:114238344..114238353,+#_83904f81ca4df006e24b19c154ac0560p58@ANK2
2.83e-66FFCP PHASE2:Hg19::chr2:33661526..33661535,+#_83904f81ca4df006e24b19c154ac0560p23@RASGRP3
2.83e-66FFCP PHASE2:Hg19::chr1:66723029..66723041,+#_83904f81ca4df006e24b19c154ac0560p54@PDE4B
1.5e-63FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_24d942504aae03d5002647636227178cp@chr4:189881560..189881604, -
1.5e-63FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_24d942504aae03d5002647636227178cp@chr4:189881560..189881604, -
2.87e-63FFCP PHASE2:Hg19::chr4:90857427..90857438,+#_7c2445493b0e4a663458d394c704bf9fp@chr4:90857427..90857438, +
2.87e-63FFCP PHASE1:Hg19::chr4:90857427..90857438,+#_7c2445493b0e4a663458d394c704bf9fp@chr4:90857427..90857438, +
3.26e-63FFCP PHASE1:Hg19::chr10:4823152..4823165,-#_ba9d78ed9bb4333f9d77317514da3bfap@chr10:4823152..4823165, -
3.26e-63FFCP PHASE2:Hg19::chr10:4823152..4823165,-#_ba9d78ed9bb4333f9d77317514da3bfap@chr10:4823152..4823165, -
7.06e-63FFCP PHASE1:Hg19::chr6:49534004..49534016,+#_aab6e8b0d91e8dd826d1a5c37a1cf74bp@chr6:49534004..49534016, +
7.06e-63FFCP PHASE2:Hg19::chr6:49534004..49534016,+#_aab6e8b0d91e8dd826d1a5c37a1cf74bp@chr6:49534004..49534016, +
1.53e-62FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_41ac8861589c7352faff59eeedfcaebap@chr12:96841308..96841312, +
1.53e-62FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_41ac8861589c7352faff59eeedfcaebap@chr12:96841308..96841312, +
8.15e-60FFCP PHASE2:Hg19::chr1:43917566..43917577,-#_8e98e82a0b7636d77f034441759c23f0p6@HYI
8.15e-60FFCP PHASE1:Hg19::chr1:43917566..43917577,-#_8e98e82a0b7636d77f034441759c23f0p6@HYI
9.96e-60FFCP PHASE2:Hg19::chr3:34262215..34262222,+#_aed81a1be71134bf33a165b6bc23d3cdp@chr3:34262215..34262222, +
9.96e-60FFCP PHASE1:Hg19::chr3:34262215..34262222,+#_aed81a1be71134bf33a165b6bc23d3cdp@chr3:34262215..34262222, +
1.22e-59FFCP PHASE1:Hg19::chr18:54339814..54339822,+#_c5c35afb79c86c18cbed5ee106b06f22p7@WDR7
1.22e-59FFCP PHASE2:Hg19::chr18:54339814..54339822,+#_c5c35afb79c86c18cbed5ee106b06f22p7@WDR7
1.82e-59FFCP PHASE2:Hg19::chr7:10196589..10196595,-#_5b0765759a7a2e55da14897e43babae9p@chr7:10196589..10196595, -
1.82e-59FFCP PHASE1:Hg19::chr7:10196589..10196595,-#_5b0765759a7a2e55da14897e43babae9p@chr7:10196589..10196595, -
2.22e-59FFCP PHASE2:Hg19::chr2:62705562..62705579,+#_c40ccbc9ff7092ff210553a8eb3c1e46p@chr2:62705562..62705579, +
2.22e-59FFCP PHASE1:Hg19::chr2:62705562..62705579,+#_c40ccbc9ff7092ff210553a8eb3c1e46p@chr2:62705562..62705579, +
8.76e-59FFCP PHASE2:Hg19::chr4:90856951..90856962,+#_1990099e3c5fa8b5830820d8dba2dbc5p@chr4:90856951..90856962, +
8.76e-59FFCP PHASE1:Hg19::chr4:90856951..90856962,+#_1990099e3c5fa8b5830820d8dba2dbc5p@chr4:90856951..90856962, +
8.76e-59FFCP PHASE2:Hg19::chr12:71031281..71031292,-#_1990099e3c5fa8b5830820d8dba2dbc5p12@PTPRB
8.76e-59FFCP PHASE1:Hg19::chr12:71031281..71031292,-#_1990099e3c5fa8b5830820d8dba2dbc5p12@PTPRB
2.07e-53FFCP PHASE2:Hg19::chr12:105882068..105882076,+#_06fd022a093cf58853555e29616c1fc7p@chr12:105882068..105882076, +
2.07e-53FFCP PHASE1:Hg19::chr12:105882068..105882076,+#_06fd022a093cf58853555e29616c1fc7p@chr12:105882068..105882076, +
2.7e-53FFCP PHASE2:Hg19::chr8:6459787..6459796,+#_5b6f5fd1e16e4f5fae5c15b2e663109ep@chr8:6459787..6459796, +
2.7e-53FFCP PHASE1:Hg19::chr8:6459787..6459796,+#_5b6f5fd1e16e4f5fae5c15b2e663109ep@chr8:6459787..6459796, +
8.47e-53FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_5d2cdcb3b7cda44568f8972864e04e9dp@chr4:38057595..38057624, -
8.47e-53FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_5d2cdcb3b7cda44568f8972864e04e9dp@chr4:38057595..38057624, -
5.43e-52FFCP PHASE1:Hg19::chr3:194868639..194868654,+#_53d15046b883ae2e65d0a2a49aa29965p1@ENST00000426468
5.43e-52FFCP PHASE2:Hg19::chr3:194868639..194868654,+#_53d15046b883ae2e65d0a2a49aa29965p1@ENST00000426468
5.37e-50FFCP PHASE2:Hg19::chr8:16425014..16425019,-#_5769e8ad944c7a23467bdbd5b161d1f3p13@MSR1
5.37e-50FFCP PHASE1:Hg19::chr8:16425014..16425019,-#_5769e8ad944c7a23467bdbd5b161d1f3p13@MSR1
1.05e-49FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_5417045c39e31f8aac614776d90d87a6p3@LOC441179
1.05e-49FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_5417045c39e31f8aac614776d90d87a6p3@LOC441179
1.46e-49FFCP PHASE1:Hg19::chr2:27487913..27487933,-#_f411462184d4ea167b80fa82cd92d8eap@chr2:27487913..27487933, -
1.46e-49FFCP PHASE2:Hg19::chr2:27487913..27487933,-#_f411462184d4ea167b80fa82cd92d8eap@chr2:27487913..27487933, -
2.21e-49FFCP PHASE2:Hg19::chr8:6420777..6420779,-#_fcd0500daf00c2fe3178a3edca8afde7p5@ANGPT2
2.21e-49FFCP PHASE1:Hg19::chr8:6420777..6420779,-#_fcd0500daf00c2fe3178a3edca8afde7p5@ANGPT2
9.56e-49FFCP PHASE2:Hg19::chr10:94590895..94590905,+#_2c39658a06577c8bbbc21f852371a916p8@EXOC6
9.56e-49FFCP PHASE1:Hg19::chr10:94590895..94590905,+#_2c39658a06577c8bbbc21f852371a916p8@EXOC6
4.56e-48FFCP PHASE2:Hg19::chr8:16425043..16425061,-#_cde18c713df6ea5e4a91d99740bbd512p5@MSR1
4.56e-48FFCP PHASE1:Hg19::chr8:16425043..16425061,-#_cde18c713df6ea5e4a91d99740bbd512p5@MSR1
4.82e-46FFCP PHASE2:Hg19::chr17:79426425..79426444,+#_90f6a21c2f567a010412498607db13d4p@chr17:79426425..79426444, +
4.82e-46FFCP PHASE1:Hg19::chr17:79426425..79426444,+#_90f6a21c2f567a010412498607db13d4p@chr17:79426425..79426444, +
9.71e-46FFCP PHASE2:Hg19::chr11:57543275..57543296,+#_82f04576f95e125469eeaf9481c066ebp@chr11:57543275..57543296, +
9.71e-46FFCP PHASE1:Hg19::chr11:57543275..57543296,+#_82f04576f95e125469eeaf9481c066ebp@chr11:57543275..57543296, +
1.36e-44FFCP PHASE1:Hg19::chr19:45226133..45226157,-#_be83407e53edf1c6142d13fd5c3bb54bp@chr19:45226133..45226157, -
1.36e-44FFCP PHASE2:Hg19::chr19:45226133..45226157,-#_be83407e53edf1c6142d13fd5c3bb54bp@chr19:45226133..45226157, -
3.19e-44FFCP PHASE2:Hg19::chr3:159570877..159570888,+#_31f4f66bd4d9c9d7c587b0b045c97cfdp43@SCHIP1
3.19e-44FFCP PHASE1:Hg19::chr3:159570877..159570888,+#_31f4f66bd4d9c9d7c587b0b045c97cfdp43@SCHIP1
6.49e-44FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_ed595cd8933d776905a07c8adf29cb14p10@PTPRB
6.49e-44FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_ed595cd8933d776905a07c8adf29cb14p10@PTPRB
8.09e-44FFCP PHASE1:Hg19::chr7:79998864..79998896,+#_c548aa790d84a5984adad00225ef5697p12@CD36
8.09e-44FFCP PHASE2:Hg19::chr7:79998864..79998896,+#_c548aa790d84a5984adad00225ef5697p12@CD36

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0005022&oldid=3272237"