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{{CL
{{CL
|id=CL:0002618
|alt_id=
|name=endothelial cell of umbilical vein
|namespace=cell
|def="An endothelial cell of the umbilical vein." [GOC:tfm]
|xref=BTO:0004296
|is_a=CL:0002543
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-14T11:36:51Z
|def="An endothelial cell of the umbilical vein." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002618
|is_a=CL:0002543
|is_obsolete=
|located_in=
|located_in=
|name=endothelial cell of umbilical vein
|namespace=cell
|obo_creation_date=2011-03-14T11:36:51Z
|part_of=UBERON:0002066
|part_of=UBERON:0002066
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0004296
}}
}}

Revision as of 10:30, 12 September 2014

Name:endothelial cell of umbilical vein
Namespace:cell
Definition:"An endothelial cell of the umbilical vein." [GOC:tfm]
Xrefs:
links:
BTO:0004296
Created by:tmeehan
Creation date:2011-03-14T11:36:51Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002543(vein endothelial cell)
part_of:UBERON:0002066(umbilical vein)



Children


derives from:FF:0000247 (human endothelial cell of umbilical vein sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
  • 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
  • 11400-118D5 (Endothelial Cells - Umbilical vein, donor3)

Mouse (Mus musculus)

  • 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
  • 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
  • 11400-118D5 (Endothelial Cells - Umbilical vein, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002618 (endothelial cell of umbilical vein), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.98e-131FFCP PHASE2:Hg19::chr1:78512168..78512171,-#_db05feaa4c277b6115d2f4329c5fef76p@chr1:78512168..78512171, -
8.98e-131FFCP PHASE1:Hg19::chr1:78512168..78512171,-#_db05feaa4c277b6115d2f4329c5fef76p@chr1:78512168..78512171, -
4.06e-99FFCP PHASE1:Hg19::chr10:94590950..94590955,+#_1e8e87481e582c15206012fc7b8593ccp13@EXOC6
4.06e-99FFCP PHASE2:Hg19::chr1:78510648..78510661,+#_1e8e87481e582c15206012fc7b8593ccp7@GIPC2
4.06e-99FFCP PHASE2:Hg19::chr10:94590950..94590955,+#_1e8e87481e582c15206012fc7b8593ccp13@EXOC6
4.06e-99FFCP PHASE1:Hg19::chr1:78510648..78510661,+#_1e8e87481e582c15206012fc7b8593ccp7@GIPC2
3.03e-98FFCP PHASE1:Hg19::chr12:105962745..105962748,+#_84752f62c5e148b41e38b02bb7596a3ep@chr12:105962745..105962748, +
3.03e-98FFCP PHASE2:Hg19::chr12:105962745..105962748,+#_84752f62c5e148b41e38b02bb7596a3ep@chr12:105962745..105962748, +
9.61e-85FFCP PHASE2:Hg19::chr1:78511901..78511912,+#_84444b0b7d77ad025039c87286e11354p6@GIPC2
9.61e-85FFCP PHASE1:Hg19::chr1:78511901..78511912,+#_84444b0b7d77ad025039c87286e11354p6@GIPC2
4.03e-84FFCP PHASE1:Hg19::chr11:59875891..59875903,-#_48e83df44c321ee094482a2d75db520dp@chr11:59875891..59875903, -
4.03e-84FFCP PHASE2:Hg19::chr11:59875891..59875903,-#_48e83df44c321ee094482a2d75db520dp@chr11:59875891..59875903, -
4.72e-75FFCP PHASE2:Hg19::chr18:53146977..53146999,-#_7b61899febd492943a5d5aef696a915ep@chr18:53146977..53146999, -
4.72e-75FFCP PHASE1:Hg19::chr18:53146977..53146999,-#_7b61899febd492943a5d5aef696a915ep@chr18:53146977..53146999, -
2.14e-74FFCP PHASE1:Hg19::chr10:94590997..94591006,+#_eefea39c26c65b700bb85cd55a441e25p11@EXOC6
2.14e-74FFCP PHASE2:Hg19::chr10:94590997..94591006,+#_eefea39c26c65b700bb85cd55a441e25p11@EXOC6
3.54e-74FFCP PHASE1:Hg19::chr12:105863737..105863745,+#_cd26fa9a482e34bbfa95b3be90588809p@chr12:105863737..105863745, +
3.54e-74FFCP PHASE2:Hg19::chr12:105863737..105863745,+#_cd26fa9a482e34bbfa95b3be90588809p@chr12:105863737..105863745, +
1.54e-66FFCP PHASE1:Hg19::chr5:63803524..63803561,+#_788ccf2afdc7cb74a313958bad537185p15@RGS7BP
1.54e-66FFCP PHASE2:Hg19::chr5:63803524..63803561,+#_788ccf2afdc7cb74a313958bad537185p15@RGS7BP
1.71e-66FFCP PHASE2:Hg19::chr16:82788994..82789018,+#_6bd1c9220dc37e3442e0b189db85d88fp@chr16:82788994..82789018, +
1.71e-66FFCP PHASE1:Hg19::chr12:105889929..105889933,+#_6bd1c9220dc37e3442e0b189db85d88fp@chr12:105889929..105889933, +
1.71e-66FFCP PHASE2:Hg19::chr12:105889929..105889933,+#_6bd1c9220dc37e3442e0b189db85d88fp@chr12:105889929..105889933, +
1.71e-66FFCP PHASE1:Hg19::chr16:82788994..82789018,+#_6bd1c9220dc37e3442e0b189db85d88fp@chr16:82788994..82789018, +
7.35e-66FFCP PHASE2:Hg19::chr21:27284505..27284518,-#_a759ffe710fb0efb8922fdf567f33ab3p@chr21:27284505..27284518, -
7.35e-66FFCP PHASE1:Hg19::chr21:27284505..27284518,-#_a759ffe710fb0efb8922fdf567f33ab3p@chr21:27284505..27284518, -
2.43e-60FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_00b5a4e91fca88410f4214202eb42b82p@chr1:172926077..172926120, -
2.43e-60FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_00b5a4e91fca88410f4214202eb42b82p@chr1:172926077..172926120, -
3.65e-60FFCP PHASE2:Hg19::chr19:7861475..7861491,+#_e6f23cca7657db058c95a1ff16f22adep@chr19:7861475..7861491, +
3.65e-60FFCP PHASE1:Hg19::chr19:7861475..7861491,+#_e6f23cca7657db058c95a1ff16f22adep@chr19:7861475..7861491, +
3.47e-55FFCP PHASE1:Hg19::chr10:59999608..59999621,-#_dae7955a231fc49510158665642dde6ap@chr10:59999608..59999621, -
3.47e-55FFCP PHASE2:Hg19::chr10:59999608..59999621,-#_dae7955a231fc49510158665642dde6ap@chr10:59999608..59999621, -
2.61e-54FFCP PHASE2:Hg19::chr1:186946611..186946622,+#_5c37ea04a6bc79afd5b3cc2c0ca6858ap@chr1:186946611..186946622, +
2.61e-54FFCP PHASE1:Hg19::chr1:186946611..186946622,+#_5c37ea04a6bc79afd5b3cc2c0ca6858ap@chr1:186946611..186946622, +
2.64e-50FFCP PHASE1:Hg19::chr12:105863627..105863633,+#_a31b0e28b70ba20173651397de59a743p@chr12:105863627..105863633, +
2.64e-50FFCP PHASE2:Hg19::chr12:105863627..105863633,+#_a31b0e28b70ba20173651397de59a743p@chr12:105863627..105863633, +
1.21e-46FFCP PHASE1:Hg19::chr6:142622846..142622853,+#_9486f56492805ff5953a3b3f3f40098dp12@GPR126
1.21e-46FFCP PHASE2:Hg19::chr6:142622846..142622853,+#_9486f56492805ff5953a3b3f3f40098dp12@GPR126
3.06e-46FFCP PHASE1:Hg19::chr6:136359549..136359565,+#_e7d6016fc24fd974be0768f0c7a7363dp2@AB384352
3.06e-46FFCP PHASE2:Hg19::chr6:136359549..136359565,+#_e7d6016fc24fd974be0768f0c7a7363dp2@AB384352
1.22e-44FFCP PHASE1:Hg19::chr2:72789511..72789554,-#_8a3cfbfe9cc0b6843a9d35417cb04894p@chr2:72789511..72789554, -
1.22e-44FFCP PHASE2:Hg19::chr2:72789511..72789554,-#_8a3cfbfe9cc0b6843a9d35417cb04894p@chr2:72789511..72789554, -
2.97e-44FFCP PHASE1:Hg19::chr11:59876093..59876098,-#_b413c1188fe2d93c449d2614523336bbp@chr11:59876093..59876098, -
2.97e-44FFCP PHASE2:Hg19::chr11:59876093..59876098,-#_b413c1188fe2d93c449d2614523336bbp@chr11:59876093..59876098, -
1.71e-40FFCP PHASE2:Hg19::chr9:35754222..35754237,-#_039c8620eec9357979cb6f6961b2983ap3@MSMP
1.71e-40FFCP PHASE1:Hg19::chr9:35754222..35754237,-#_039c8620eec9357979cb6f6961b2983ap3@MSMP
1.01e-38FFCP PHASE1:Hg19::chr10:94607612..94607616,+#_fd221f122c51ba173f69ef9b1664a473p@chr10:94607612..94607616, +
1.01e-38FFCP PHASE2:Hg19::chr10:94607612..94607616,+#_fd221f122c51ba173f69ef9b1664a473p@chr10:94607612..94607616, +
1.23e-38FFCP PHASE1:Hg19::chr1:186946659..186946664,+#_4a030002817da6a93bde22f6c98b6443p@chr1:186946659..186946664, +
1.23e-38FFCP PHASE2:Hg19::chr1:186946659..186946664,+#_4a030002817da6a93bde22f6c98b6443p@chr1:186946659..186946664, +
2.64e-38FFCP PHASE2:Hg19::chr9:14231115..14231119,-#_25945133e7b7f1cc24140bcea53e66bep@chr9:14231115..14231119, -
2.64e-38FFCP PHASE1:Hg19::chr9:14231115..14231119,-#_25945133e7b7f1cc24140bcea53e66bep@chr9:14231115..14231119, -
3.34e-37FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_2dab3c2a1308daf4e49db29b6f5621adp@chr9:139563124..139563129, +
3.34e-37FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_2dab3c2a1308daf4e49db29b6f5621adp@chr9:139563124..139563129, +
1.64e-36FFCP PHASE2:Hg19::chr10:94590895..94590905,+#_207181062d0f33f73808632a448b8294p8@EXOC6
1.64e-36FFCP PHASE1:Hg19::chr10:94590895..94590905,+#_207181062d0f33f73808632a448b8294p8@EXOC6
2.98e-36FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_20d4f56a85ee733bf7e4df95391714e8p7@WDFY4
2.98e-36FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_20d4f56a85ee733bf7e4df95391714e8p7@WDFY4
4.27e-34FFCP PHASE1:Hg19::chr4:86684588..86684603,-#_121c6fa8d3f8b50e23ddf1032c192fe4p@chr4:86684588..86684603, -
4.27e-34FFCP PHASE2:Hg19::chr4:86684588..86684603,-#_121c6fa8d3f8b50e23ddf1032c192fe4p@chr4:86684588..86684603, -
5.96e-34FFCP PHASE1:Hg19::chr19:7861495..7861500,+#_11a952c671ccab8127373a41551f0826p@chr19:7861495..7861500, +
5.96e-34FFCP PHASE2:Hg19::chr2:56216738..56216739,-#_11a952c671ccab8127373a41551f0826p@chr2:56216738..56216739, -
5.96e-34FFCP PHASE2:Hg19::chr19:7861495..7861500,+#_11a952c671ccab8127373a41551f0826p@chr19:7861495..7861500, +
5.96e-34FFCP PHASE1:Hg19::chr2:56216738..56216739,-#_11a952c671ccab8127373a41551f0826p@chr2:56216738..56216739, -
1.41e-32FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_6e5a1526d422bf538e274238616b8a9bp@chr12:96841308..96841312, +
1.41e-32FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_6e5a1526d422bf538e274238616b8a9bp@chr12:96841308..96841312, +
2.23e-31FFCP PHASE2:Hg19::chr21:39869867..39869880,-#_bb9c7607a0772326159b7e8439a0a5eep@chr21:39869867..39869880, -
2.23e-31FFCP PHASE1:Hg19::chr21:39869867..39869880,-#_bb9c7607a0772326159b7e8439a0a5eep@chr21:39869867..39869880, -
2.66e-31FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_18c2597934954ef6c145f1d31fcc9d0ap@chr12:105863705..105863718, +
2.66e-31FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_18c2597934954ef6c145f1d31fcc9d0ap@chr12:105863705..105863718, +
1.0e-30FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_0b8247c8e0a4cce8f0692e4c96db8f86p6@WDFY4
1.0e-30FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_0b8247c8e0a4cce8f0692e4c96db8f86p6@WDFY4
1.11e-30FFCP PHASE1:Hg19::chr12:10794718..10794741,+#_987f1855e005fd03d4258308a86ff49cp@chr12:10794718..10794741, +
1.11e-30FFCP PHASE2:Hg19::chr12:10794718..10794741,+#_987f1855e005fd03d4258308a86ff49cp@chr12:10794718..10794741, +
1.71e-30FFCP PHASE2:Hg19::chr5:21824001..21824014,+#_aba62804744e1a8ae3a784f99719d12ep@chr5:21824001..21824014, +
1.71e-30FFCP PHASE1:Hg19::chr5:21824001..21824014,+#_aba62804744e1a8ae3a784f99719d12ep@chr5:21824001..21824014, +
2.24e-30FFCP PHASE2:Hg19::chr1:61415107..61415136,-#_3c1ff2140739971145bf03208ffb8e51p@chr1:61415107..61415136, -
2.24e-30FFCP PHASE1:Hg19::chr1:61415107..61415136,-#_3c1ff2140739971145bf03208ffb8e51p@chr1:61415107..61415136, -
2.48e-30FFCP PHASE2:Hg19::chr2:18479033..18479051,+#_8c48e4ecc5df229216164fa19474fee3p@chr2:18479033..18479051, +
2.48e-30FFCP PHASE1:Hg19::chr2:18479033..18479051,+#_8c48e4ecc5df229216164fa19474fee3p@chr2:18479033..18479051, +
2.82e-30FFCP PHASE2:Hg19::chr10:94591023..94591034,+#_c20c98fa8284ef759432761b066f2d9ap7@EXOC6
2.82e-30FFCP PHASE1:Hg19::chr10:94591023..94591034,+#_c20c98fa8284ef759432761b066f2d9ap7@EXOC6
3.1e-30FFCP PHASE2:Hg19::chr2:197226784..197226793,-#_111154ccf589a3efaa454c63604b45b4p21@HECW2
3.1e-30FFCP PHASE1:Hg19::chr2:197226784..197226793,-#_111154ccf589a3efaa454c63604b45b4p21@HECW2
4.17e-30FFCP PHASE2:Hg19::chr3:169078072..169078076,-#_5c06ca4cf6c9022bc627fcd8f8f7ca03p@chr3:169078072..169078076, -
4.17e-30FFCP PHASE1:Hg19::chr3:169078072..169078076,-#_5c06ca4cf6c9022bc627fcd8f8f7ca03p@chr3:169078072..169078076, -
5.07e-30FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_cb206f248a0f05047de8755ba10e1080p@chr18:33046982..33046991, -
5.07e-30FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_cb206f248a0f05047de8755ba10e1080p@chr18:33046982..33046991, -
9.11e-30FFCP PHASE1:Hg19::chr13:32838839..32838850,+#_5d67164e9fdc0ca631823cd39bfa471ep20@FRY
9.11e-30FFCP PHASE2:Hg19::chr13:32838839..32838850,+#_5d67164e9fdc0ca631823cd39bfa471ep20@FRY
1.34e-29FFCP PHASE2:Hg19::chr1:187997086..187997109,+#_1930907abe986d76d2ee49074d5564f7p@chr1:187997086..187997109, +
1.34e-29FFCP PHASE1:Hg19::chr1:187997086..187997109,+#_1930907abe986d76d2ee49074d5564f7p@chr1:187997086..187997109, +
2.64e-29FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_6cc074f40fc176d7e6b722a99d3a837dp11@MANSC1
2.64e-29FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_6cc074f40fc176d7e6b722a99d3a837dp11@MANSC1
5.7e-29FFCP PHASE2:Hg19::chr9:139559213..139559241,+#_22a2765358fef9a71781fcf4b42dcc2dp5@EGFL7
5.7e-29FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_22a2765358fef9a71781fcf4b42dcc2dp5@PARP12
5.7e-29FFCP PHASE1:Hg19::chr9:139559213..139559241,+#_22a2765358fef9a71781fcf4b42dcc2dp5@EGFL7
5.7e-29FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_22a2765358fef9a71781fcf4b42dcc2dp5@PARP12
6.91e-29FFCP PHASE2:Hg19::chr3:194868625..194868636,+#_d81326042a857da4fa17b3853a9a7d7ep2@ENST00000426468
6.91e-29FFCP PHASE1:Hg19::chr3:194868625..194868636,+#_d81326042a857da4fa17b3853a9a7d7ep2@ENST00000426468

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