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motif without matrices
[[Swissregulon:SRY.p1]]
[[Swissregulon:HOX(A,B,D)3.p1]]
doubled top motif tables
CNhs10855 & CNhs11062
CNhs11245 & CNhs11183
CNhs11248 & CNhs11185
CNhs11772 & CNhs12996
CNhs11781 & CNhs12997
== enrichment analysis ==
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$(document).ready(function() {
$(document).ready(function() {
var motifs = ["1-CSGATGAAT,CNhs12011,BestGuess:Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq/Homer(0.678135376239164),T:462.0(37.62%),B:11082.2(23.47%),P:1e-27","1-GGAGGAGRAGG,CNhs13817,BestGuess:MZF1.p2.SwissRegulon.nucfreq(0.73663833101872),T:834.0(34.32%),B:11155.7(23.85%),P:1e-30","1-TATKWNTTCMGTGTY,BestGuess:PB0012.1_Elf3_1(0.645092744449619),T:56.0(2.15%),B:42.5(0.09%),P:1e-44","1-TGAGTCATTTCCT,CNhs10837,BestGuess:BATF_si_HM09(0.744616642587065),T:140.0(15.12%),B:2484.2(5.17%),P:1e-28","1-TGGTCCYSCTGGTCC,BestGuess:MA0267.1_ACE2(0.614022138603491),T:70.0(3.79%),B:93.8(0.20%),P:1e-62","1-TWTTWVNSCS,CNhs11086,BestGuess:HMGA1_f1_HM09(0.621491710547325),T:376.0(31.95%),B:8855.4(18.54%),P:1e-27","10-ACTTCCTCTTCC,CNhs12563,BestGuess:PU.1(ETS)/ThioMac-PU.1-ChIP-Seq/Homer(0.742292052878174),T:576.0(13.16%),B:3275.9(7.45%),P:1e-38","10-ATCGATTG,BestGuess:HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)(0.719249319691647),T:2807.0(39.90%),B:13696.2(32.89%),P:1e-29","10-CGCGTGTTA,CNhs13235,BestGuess:AHR_ARNT_ARNT2.p2.SwissRegulon.nucfreq(0.731547557187781),T:1365.0(55.20%),B:19304.7(43.43%),P:1e-31","10-GCTTHCTCAT,CNhs13227,BestGuess:SPIB_f1_HM09(0.679182037171933),T:251.0(7.98%),B:1662.7(3.71%),P:1e-27","10-GGGAAGTGACG,CNhs13546,BestGuess:SPI1.p2.SwissRegulon.nucfreq(0.748115754357721),T:285.0(6.10%),B:880.7(1.99%),P:1e-58","10-GGTTTCTTTT,CNhs12311,BestGuess:STAT2_f1_HM09(0.738888127059946),T:856.0(19.39%),B:5883.4(13.38%),P:1e-28","10-GTAACHDC,CNhs12354,BestGuess:OVOL1_f1_HM09(0.671505012970234),T:1108.0(36.13%),B:12113.6(27.10%),P:1e-27","10-GTGATGTCACT,CNhs11999,BestGuess:CREM_f1_HM09(0.731019089758793),T:1647.0(42.96%),B:14369.6(33.04%),P:1e-36","10-GTTTCTACG,CNhs13237,BestGuess:RFX1_f1_HM09(0.675590669667085),T:710.0(25.47%),B:6908.9(15.69%),P:1e-39","10-TCCTCCGATT,CNhs13795,BestGuess:Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer(0.671867263860539),T:1802.0(40.57%),B:14207.3(32.43%),P:1e-29","10-TCTATGAC,CNhs10632,BestGuess:MAFG_si_HM09(0.722940260759648),T:496.0(9.31%),B:2315.3(5.37%),P:1e-30","10-TCTBACKA,CNhs11049,BestGuess:SMAD3_f1_HM09(0.594452084885537),T:658.0(26.79%),B:8012.1(17.81%),P:1e-27","10-TGCGTCATTT,CNhs13549,BestGuess:FOXN1.p2.SwissRegulon.nucfreq(0.720851359815688),T:544.0(18.62%),B:4951.5(10.83%),P:1e-35","10-TGTCACTGCG,BestGuess:PB0091.1_Zbtb3_1(0.661422118679983),T:923.0(20.12%),B:6011.2(13.78%),P:1e-28","10-VGGAAACGAC,CNhs13491,BestGuess:REL_do_HM09(0.735873087466282),T:323.0(10.71%),B:2330.8(5.04%),P:1e-35","10-WGACAAC,CNhs13239,BestGuess:Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq/Homer(0.741488069271231),T:2239.0(73.77%),B:27365.4(62.56%),P:1e-38","10-YGAGTCHYTD,CNhs13471,BestGuess:SMRC1_f1_HM09(0.728242935500498),T:401.0(5.09%),B:775.8(1.89%),P:1e-66","11-AACGAATCGA,CNhs11047,BestGuess:SOX4_f1_HM09(0.589011831866508),T:924.0(33.58%),B:10312.0(23.25%),P:1e-34","11-AGGCAGTACCTC,CNhs13493,BestGuess:ETV7_si_HM09(0.609389946537654),T:4256.0(60.40%),B:22100.9(52.82%),P:1e-37","11-CGGGGAAATTAC,CNhs11958,BestGuess:NFkB-p65-Rel(RHD)/LPS-exp/Homer(0.731055342133736),T:406.0(7.71%),B:1569.7(3.61%),P:1e-43","11-CGTCTGCGTA,CNhs11998,BestGuess:MAFB.p2.SwissRegulon.nucfreq(0.625154891780755),T:1573.0(41.98%),B:13603.9(31.40%),P:1e-41","11-GATTTCACAACC,CNhs13208,BestGuess:CEBPA_do_HM09(0.72106432208863),T:200.0(6.08%),B:1156.0(2.54%),P:1e-27","11-GCTGTGACGA,CNhs12546,BestGuess:E4F1_f1_HM09(0.73045265958925),T:1017.0(18.90%),B:4818.1(11.21%),P:1e-60","11-GTAACGCCCC,CNhs13480,BestGuess:RELB_si_HM09(0.668442487331342),T:306.0(6.72%),B:1487.7(3.41%),P:1e-27","11-TCGGGGTGTTTT,CNhs10853,BestGuess:FOXO3_si_HM09(0.632686100110058),T:433.0(14.33%),B:3647.7(8.30%),P:1e-27","11-TSACGCSTCAGT,CNhs13485,BestGuess:CREB1_f1_HM09(0.648721945847651),T:2933.0(44.14%),B:14777.5(34.97%),P:1e-53","11-TTTGAGGAAGTTG,CNhs10852,BestGuess:ETV4_f1_HM09(0.727516093263617),T:454.0(6.03%),B:1264.6(3.06%),P:1e-39","11-WACGYACGTG,CNhs12343,BestGuess:ARNT_f1_HM09(0.704807301786755),T:842.0(24.82%),B:7417.0(16.81%),P:1e-31","11-WGTGKKTTTT,CNhs13239,BestGuess:RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer(0.737747370786036),T:738.0(24.32%),B:6663.9(15.23%),P:1e-38","12-CGCGGCGGCGGCT,CNhs11959,BestGuess:EGR1_f2_HM09(0.69303244198093),T:6852.0(74.70%),B:27632.3(68.98%),P:1e-33","12-CSCCYTTTWA,CNhs11049,BestGuess:GTF2A1,2.p2.SwissRegulon.nucfreq(0.675210679139049),T:631.0(25.69%),B:7523.0(16.72%),P:1e-28","12-GCNGTGTRAC,CNhs13549,BestGuess:OVOL1_f1_HM09(0.643209920572819),T:233.0(7.98%),B:1564.2(3.42%),P:1e-30","12-GTAGCWCSGC,CNhs13238,BestGuess:RFX2_f1_HM09(0.622836631783224),T:960.0(37.01%),B:11807.9(26.86%),P:1e-29","12-GWTYKNKNTTG,CNhs11955,BestGuess:BRCA1_f1_HM09(0.666699894093852),T:663.0(15.80%),B:4371.9(10.11%),P:1e-29","12-GYTTGWTATTG,CNhs12563,BestGuess:ARI5B_f1_HM09(0.72648803831284),T:2107.0(48.15%),B:17419.3(39.59%),P:1e-29","12-SSARTSACMRCA,CNhs13545,BestGuess:PAX2_si_HM09(0.7022499609152),T:3506.0(43.86%),B:13765.9(33.72%),P:1e-78","12-TGCAGTNTTT,BestGuess:PB0146.1_Mafk_2(0.747344236872539),T:1408.0(26.75%),B:8671.2(20.11%),P:1e-27","12-TGWCACGGCG,CNhs12575,BestGuess:TGIF1_si_HM09(0.644167299035481),T:829.0(18.90%),B:5522.3(12.44%),P:1e-33","13-AATTCCG,CNhs13473,BestGuess:TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer(0.742732423596976),T:1770.0(21.55%),B:5986.4(14.72%),P:1e-60","13-CBTACGCAA,CNhs11998,BestGuess:CEBPE_f1_HM09(0.675146696744791),T:583.0(15.56%),B:4102.7(9.47%),P:1e-31","13-CGTCACAGGAAAC,CNhs11959,BestGuess:EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer(0.731501031790585),T:4914.0(53.57%),B:19036.8(47.52%),P:1e-30","13-GGATTTGT,BestGuess:Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer(0.704713043873326),T:2522.0(46.38%),B:16396.8(38.37%),P:1e-29","13-GGCTGKTACT,BestGuess:TEAD4_f1_HMv8(0.691325689706636),T:2800.0(39.80%),B:13514.0(32.45%),P:1e-32","13-GTACTTTCCA,CNhs11997,BestGuess:TF65_f2_HM09(0.730812743090709),T:1367.0(19.00%),B:5104.8(12.27%),P:1e-59","13-GTGTCABACG,CNhs11956,BestGuess:ARNT2_si_HM09(0.598471375174173),T:684.0(15.18%),B:3792.5(8.84%),P:1e-42","13-MGCTGACACACGC,CNhs13544,BestGuess:MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.68771280716031),T:4206.0(60.89%),B:22115.3(52.76%),P:1e-41","13-STTYSWCWTCY,CNhs13546,BestGuess:PU.1-IRF/Bcell-PU.1-ChIP-Seq/Homer(0.739002763202313),T:232.0(4.97%),B:858.6(1.94%),P:1e-35","14-ACWTCYTGCTT,CNhs12548,BestGuess:Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer(0.685452287521708),T:142.0(2.20%),B:256.1(0.61%),P:1e-36","14-ATTACGC,CNhs12549,BestGuess:CEBPE_f1_HM09(0.709655510778844),T:3300.0(40.34%),B:13020.1(32.23%),P:1e-53","14-CACTTCCGTAA,CNhs13465,BestGuess:SPI1.p2.SwissRegulon.nucfreq(0.688199677424306),T:306.0(4.40%),B:869.7(2.07%),P:1e-32","14-RSCGSWVTCT,CNhs11047,BestGuess:TYY1_f2_HM09(0.585001225521592),T:704.0(25.58%),B:7676.3(17.31%),P:1e-27","14-TACGCCC,CNhs13471,BestGuess:EGR3_f1_HM09(0.728073178641985),T:1954.0(24.82%),B:7818.6(19.01%),P:1e-36","14-TSTCRGCTR,CNhs13489,BestGuess:MAFB_f1_HM09(0.674358944842871),T:1012.0(20.67%),B:6452.1(14.63%),P:1e-29","14-TTAMCGKAA,CNhs13495,BestGuess:Stat3(Stat)/mES-Stat3-ChIP-Seq/Homer(0.726352248535498),T:311.0(5.24%),B:1047.9(2.44%),P:1e-33","15-AGRMAACCG,CNhs11998,BestGuess:BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer(0.712534743949132),T:570.0(15.21%),B:4013.1(9.26%),P:1e-30","15-CWTCTGACTV,CNhs10852,BestGuess:MAFG_si_HM09(0.740487223186701),T:775.0(10.29%),B:2472.4(5.98%),P:1e-46","15-NNNTDAGHAA,CNhs11954,BestGuess:BATF_si_HM09(0.732951413982858),T:337.0(4.60%),B:775.9(1.87%),P:1e-47","15-TKABWMGC,CNhs12546,BestGuess:VSX2_si_HM09(0.661951514590448),T:2707.0(50.30%),B:17865.7(41.55%),P:1e-37","16-ATGACTCACTT,CNhs13470,BestGuess:FOS_FOS{B,L1}_JUN{B,D}.p2.SwissRegulon.nucfreq(0.725128996863668),T:251.0(3.88%),B:660.4(1.55%),P:1e-36","16-GCTTYCTS,CNhs11956,BestGuess:ETV4_f1_HM09(0.734276630539657),T:1423.0(31.57%),B:10127.8(23.60%),P:1e-33","16-GTKACGDWGC,CNhs12001,BestGuess:E4F1_f1_HM09(0.725021247236754),T:381.0(7.83%),B:1593.4(3.75%),P:1e-38","16-RBYKBTWACG,CNhs11998,BestGuess:E4F1_f1_HM09(0.704946787356956),T:366.0(9.77%),B:2267.0(5.23%),P:1e-28","16-TCAGCTGACG,CNhs13544,BestGuess:TFAP4_si_HM09(0.738629634845809),T:2815.0(40.75%),B:13928.4(33.23%),P:1e-38","18-GAAGTGGGTGG,CNhs13470,BestGuess:GLI3_si_HM09(0.721664887876974),T:598.0(9.25%),B:2289.8(5.37%),P:1e-35","2-AATGCGTT,CNhs12398,BestGuess:TEAD1.p2.SwissRegulon.nucfreq(0.665777336042668),T:494.0(21.54%),B:6046.5(13.10%),P:1e-28","2-AWTSGCT,CNhs13795,BestGuess:CEBPZ_si_HM09(0.744042497450074),T:453.0(10.20%),B:2373.4(5.42%),P:1e-36","2-CCTTTTAA,CNhs10616,BestGuess:TBP.p2.SwissRegulon.nucfreq(0.686755716817853),T:576.0(32.43%),B:9446.6(20.01%),P:1e-34","2-CGBTDATTA,CNhs11738,BestGuess:VSX1,2.p2.SwissRegulon.nucfreq(0.661894239176874),T:615.0(33.41%),B:10129.8(21.84%),P:1e-29","2-GATYGSAS,CNhs12124,BestGuess:DDIT3_f1_HM09(0.677019515102138),T:490.0(42.50%),B:12794.1(26.72%),P:1e-30","2-SVGTTTAAA,CNhs10867,BestGuess:TBP_f1_HM09(0.661697259180343),T:352.0(42.62%),B:11458.2(24.80%),P:1e-28","2-TATATAGCCG,CNhs12857,BestGuess:TBP_f1_HM09(0.674770050325601),T:347.0(13.45%),B:2866.3(6.19%),P:1e-40","2-TTCAAATCTCCCGC,CNhs13552,BestGuess:NFKB2_f1_HM09(0.609490677334814),T:58.0(4.01%),B:107.2(0.24%),P:1e-49","2-TTWAACCS,BestGuess:PB0184.1_Tbp_2(0.667480797491517),T:2682.0(47.74%),B:15905.8(37.21%),P:1e-50","3-AAACYGGTTTG,CNhs11289,BestGuess:MYBL2.p2.SwissRegulon.nucfreq(0.606801607710541),T:154.0(9.51%),B:1518.4(3.20%),P:1e-31","3-AGAAAAVGGAACT,CNhs13229,BestGuess:SPIB_f1_HM09(0.724101944953052),T:119.0(4.85%),B:617.2(1.33%),P:1e-31","3-ATAAADCGC,CNhs12726,BestGuess:CDX2_f1_HM09(0.712194436039008),T:673.0(38.81%),B:11966.5(25.88%),P:1e-31","3-AWTTSSYS,CNhs11931,BestGuess:E2F5_do_HM09(0.711393182766542),T:588.0(39.84%),B:12345.6(26.38%),P:1e-28","3-CCCCCCTTTTTT,BestGuess:SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer(0.693294444999093),T:1732.0(31.85%),B:9477.2(22.18%),P:1e-52","3-CGCCCATT,CNhs12824,BestGuess:EGR3_f1_HM09(0.703087484203052),T:863.0(52.98%),B:18409.0(38.92%),P:1e-29","3-CGCTATTTAAAC,BestGuess:MA0170.1_C15(0.700098614633398),T:951.0(61.99%),B:21477.0(46.61%),P:1e-32","3-GATGATGAT,CNhs13639,BestGuess:NFE2L1.p2.SwissRegulon.nucfreq(0.64525684730301),T:1253.0(36.79%),B:12578.6(27.32%),P:1e-32","3-GCGGGAGGGAGT,BestGuess:E2F6_f1_HMv8(0.743777576082714),T:1210.0(22.36%),B:6124.1(14.24%),P:1e-50","3-GCGTTTGAAT,CNhs12005,BestGuess:POU5F1.p2.SwissRegulon.nucfreq(0.706857732279924),T:673.0(53.37%),B:17006.1(36.66%),P:1e-32","3-MASTTCCCCTTW,CNhs11673,BestGuess:NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq/Homer(0.739349270844042),T:141.0(4.14%),B:616.2(1.34%),P:1e-29","3-TTTCGAAT,CNhs11282,BestGuess:PO2F2_si_HM09(0.691254770764022),T:190.0(20.43%),B:3484.4(7.65%),P:1e-34","4-AAAACGCGC,CNhs11715,BestGuess:TFDP1.p2.SwissRegulon.nucfreq(0.642529101169757),T:817.0(48.20%),B:14835.1(33.17%),P:1e-36","4-AAAWRCG,CNhs11846,BestGuess:IRF7_f1_HM09(0.60007928784966),T:754.0(48.77%),B:16161.7(35.17%),P:1e-27","4-CGGAGAGATA,CNhs10649,BestGuess:GATA4_f1_HM09(0.689128766006666),T:1582.0(49.30%),B:17422.3(38.57%),P:1e-34","4-CGTRGTTT,CNhs11891,BestGuess:RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer(0.731010182306382),T:402.0(36.45%),B:9965.7(21.70%),P:1e-28","4-CTCTCTCTC,CNhs12610,BestGuess:GTF2I.p2.SwissRegulon.nucfreq(0.695676810727001),T:1446.0(39.30%),B:12640.2(28.34%),P:1e-45","4-GAAGTRCCCAAGAAA,BestGuess:STAT6/Macrophage-Stat6-ChIP-Seq/Homer(0.635535008220077),T:57.0(1.74%),B:80.1(0.17%),P:1e-30","4-GCAAATCGGA,CNhs11045,BestGuess:NFY{A,B,C}.p2.SwissRegulon.nucfreq(0.684584926991251),T:546.0(31.02%),B:8708.7(18.96%),P:1e-33","4-GCYTCTYTBTTTTT,CNhs11796,BestGuess:FOXA1:AR/LNCAP-AR-ChIP-Seq/Homer(0.631391267927214),T:2696.0(53.42%),B:19698.2(45.15%),P:1e-31","4-GGGTTAAA,BestGuess:PH0124.1_Obox5_1(0.672618635751901),T:1582.0(44.80%),B:15795.0(34.18%),P:1e-35","4-HCTTHYBCTD,CNhs11948,BestGuess:SPIB.p2.SwissRegulon.nucfreq(0.717774978553243),T:243.0(7.21%),B:1263.9(2.74%),P:1e-39","4-NTGTTTTTTTKTC,CNhs13238,BestGuess:Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq/Homer(0.720601838754395),T:1131.0(43.60%),B:14362.2(32.67%),P:1e-30","4-SGSTTAWA,CNhs12494,BestGuess:TBP_f1_HM09(0.686915185618861),T:1802.0(44.43%),B:16035.2(35.80%),P:1e-29","4-TAAAAAGACAGC,BestGuess:MA0277.1_AZF1(0.739253201245228),T:1198.0(22.14%),B:6407.5(14.90%),P:1e-39","4-TTAAACCG,BestGuess:MA0218.1_ct(0.736810492124554),T:574.0(29.56%),B:8494.7(18.45%),P:1e-30","4-TTTAAAGCGG,CNhs10647,BestGuess:NANOG_f1_HM09(0.621152689555457),T:1415.0(35.52%),B:11215.6(25.42%),P:1e-44","4-TTYCTCTKCWGMR,CNhs11671,BestGuess:SPIB.p2.SwissRegulon.nucfreq(0.741062322726526),T:845.0(26.38%),B:8432.1(18.22%),P:1e-29","5-ATTGGGCGG,CNhs13738,BestGuess:TFDP1_f1_HM09(0.691373558847251),T:479.0(25.18%),B:6485.5(13.93%),P:1e-37","5-AWTKGKCGVG,CNhs13826,BestGuess:TFDP1.p2.SwissRegulon.nucfreq(0.666557766010215),T:319.0(15.23%),B:3397.8(7.34%),P:1e-33","5-CCCGCCTTTA,CNhs13822,BestGuess:TFDP1.p2.SwissRegulon.nucfreq(0.705738347845898),T:458.0(23.46%),B:6244.2(13.46%),P:1e-32","5-CCGGATTTA,CNhs13826,BestGuess:ELK4_f1_HM09(0.684350736035022),T:1354.0(64.66%),B:23785.4(51.36%),P:1e-34","5-CGGGAAACTAC,CNhs13471,BestGuess:TF65_f2_HM09(0.69277072681268),T:1171.0(14.88%),B:3229.7(7.85%),P:1e-95","5-CGRAWAT,CNhs12703,BestGuess:ERG_f1_HM09(0.699112724441203),T:665.0(32.20%),B:10154.6(21.73%),P:1e-27","5-CGTCACTMGT,CNhs13229,BestGuess:PAX2_si_HM09(0.744606635441944),T:780.0(31.77%),B:9602.9(20.73%),P:1e-36","5-CGTCTGATA,CNhs11888,BestGuess:GATA4_f1_HM09(0.724258531733217),T:591.0(33.18%),B:10117.5(21.85%),P:1e-27","5-GCGAATA,CNhs11047,BestGuess:E2F7_f1_HM09(0.650122619017576),T:1609.0(58.47%),B:19244.9(43.39%),P:1e-56","5-GCGATTCAAA,CNhs11280,BestGuess:POU5F1.p2.SwissRegulon.nucfreq(0.660812030307913),T:491.0(34.75%),B:10290.7(21.81%),P:1e-28","5-GCTTSYTGTTTW,CNhs13238,BestGuess:SPIB_f1_HM09(0.586435832002115),T:131.0(5.05%),B:636.6(1.45%),P:1e-32","5-GGTGRTTDTT,CNhs13795,BestGuess:HBP1_HMGB_SSRP1_UBTF.p2.SwissRegulon.nucfreq(0.710333748376522),T:1718.0(38.68%),B:12982.1(29.64%),P:1e-37","5-GTTGTTGC,BestGuess:MA0262.1_mab-3(0.723147098195891),T:2965.0(42.15%),B:14208.0(34.12%),P:1e-37","5-NCTSTCTCTTTN,CNhs11796,BestGuess:IRF1_si_HM09(0.676521942053904),T:1378.0(27.30%),B:8767.1(20.09%),P:1e-34","5-SBGTYRTYWGRS,CNhs12593,BestGuess:RFX1_f1_HM09(0.656185092251034),T:1285.0(42.56%),B:13939.4(30.84%),P:1e-41","5-TCATTTGC,BestGuess:PH0145.1_Pou2f3(0.71629618284599),T:2349.0(42.06%),B:14120.3(32.94%),P:1e-40","5-TCTGCGTCAC,CNhs13223,BestGuess:CREB1.p2.SwissRegulon.nucfreq(0.738713041987632),T:571.0(22.94%),B:5615.5(12.67%),P:1e-44","5-TGWTTKCCWG,BestGuess:EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer(0.704718315630705),T:435.0(18.64%),B:4626.0(10.02%),P:1e-33","5-TTAATCAGCC,CNhs11073,BestGuess:VSX1,2.p2.SwissRegulon.nucfreq(0.718299549902452),T:1094.0(41.02%),B:13299.7(29.63%),P:1e-35","5-WCCGWTAR,CNhs13822,BestGuess:BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer(0.730612382014839),T:1129.0(57.84%),B:20926.8(45.12%),P:1e-28","6-AAAAACGCCC,CNhs11049,BestGuess:ZN384_f1_HM09(0.694433879596684),T:950.0(38.68%),B:12175.3(27.06%),P:1e-35","6-AAGTTCCGC,CNhs10857,BestGuess:ELF1(ETS)/Jurkat-ELF1-ChIP-Seq/Homer(0.673401815479306),T:481.0(23.17%),B:6253.8(13.50%),P:1e-32","6-AATCTCGC,BestGuess:MA0038.1_Gfi(0.689546444014436),T:598.0(32.24%),B:9791.7(21.07%),P:1e-27","6-AATTAGAGCG,BestGuess:HXD10_f1_HMv8(0.712632687726255),T:260.0(13.95%),B:2986.3(6.41%),P:1e-29","6-ACGCTTGTTT,CNhs11955,BestGuess:FOXO3_si_HM09(0.644060692176259),T:1703.0(40.59%),B:12652.6(29.25%),P:1e-54","6-AGGAAGTGAYGYAA,CNhs13488,BestGuess:PU.1(ETS)/ThioMac-PU.1-ChIP-Seq/Homer(0.743657150708996),T:2870.0(34.51%),B:9265.3(22.80%),P:1e-129","6-AGTTCTGTTTT,CNhs13468,BestGuess:SPIB_f1_HM09(0.677297976521518),T:289.0(10.00%),B:2169.0(4.66%),P:1e-32","6-ATATTTGGCA,BestGuess:MA0161.1_NFIC(0.742456156469808),T:660.0(16.57%),B:4812.3(10.56%),P:1e-27","6-ATGATTAGTCA,CNhs13491,BestGuess:PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq/Homer(0.732116280856607),T:528.0(17.51%),B:3866.7(8.37%),P:1e-57"];
    var oTable = $('.ff_sample_list').dataTable({
var pval = [1,1,1,1,6.13482e-09,1,1,1,1,1,0.999604,1,1,1,1,1,1,1,1,1,1,0.00708028,1,1,1,1,0.999946,1,1,1,1,1,0.997015,1,1,1,1,1,1,1,1,0.999984,1,1,1,0.00816367,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.0100364,1,1,0.96714,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999993,1,1,1,1,1,1,1,1,1,1,5.89797e-08,0.999999,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.993238,1,1,1,1,1,1,1,1,0.0390238,1,1,0.343053,1,1,0.980803,1,1,1,0.999689,1,1,1,1,1,1,1,1,1,1,1,1,0.825871,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.997359,1,1,1,1,1,1,1,1,1,1,1,1,0.999947,1,1,0.998966,1,1,1,1,1,1,1,1,1,1,1,1,1,0.911901,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999755,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.000493084,8.77295e-51,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.998598,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999987,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999974,1,1,1,1,1,1,1,1,1,1,1,1,0,1,1,1,1,1,1,1,0.991086,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.906871,1,0.994737,1,0.834479,1,0.997178,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.993321,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1.05417e-08,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.835013,1,9.23934e-10,1,1,1,1,1,1,1,1,1,1,1,1,1,0.997324,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999999,0.938664,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.337207,1,1,1,1,1,1,0.999988,1,1,1,0.645058,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999992,1.51362e-09,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.988897,1,0.99984,1,1,1,0.999998,1,1,0.989695,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,9.93892e-06,1,1,1,1,1,1,1,1,1,1,1,1,1,0.702219,1,1,1,1,1,1,1,1,1,1,1,1,6.60378e-15,1.49915e-09,1,1,1,7.26153e-12,1.56756e-07,1,1,0.560302,1,1,0.199247,1.76124e-05,0.99994,1,1,1,2.55112e-06,0.323866,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1.42689e-05,1,1,1,0.561362,1,1,1,0.0545097,1,5.60293e-08,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.003232,1,0.999999,1,1,1,1,1.86691e-11,1,1,1,1,0.879851,0.953685,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.606544,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999975,1,1,1,0.999998,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.00434176,1,1,1,0.999999,1,1,1,1,1,1,1,0.999999,1,1,1,1,1,1,1,0.99999,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999976,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.998762,1,0.303727,1,1,2.07678e-05,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999991,1,2.07441e-34,1,0.957223,1,1,1,1,1,1,1,1,1,0.999946,1,1,1,0.999943,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1];
var data = [];
for(i1=0;i1<motifs.length;i1++){
data.push([motifs[i1],pval[i1]]);
}


    $('#tfbs_overexpression_table').dataTable({
//"aaData": [["one", 1],["two", 3],["three", 0]],
"aaData": data,
"aoColumns": [{ "sTitle": "Motifs", "sWidth": "200pt", "fnRender": function(obj) {
return sReturn = obj.aData[ obj.iDataColumn ].replace("BestGuess","<br>BestGuess");
} },{ "sTitle": "p-value" }]
});
});
});
});
</script>
</script>
<table id="tfbs_overexpression_table"></table>
</html>
</html>


 
{{#ask:[[Concept:FF_samples_withname]]|[[Sample_species::Human (Homo sapiens)]]|mainlabel=FF ontology id|?Name|?Sample_category|?datafreeze_phase
 
|format=ttable|class=ff_sample_list|limit=20|searchlabel=}}
{{REVISIONTIMESTAMP}}
{{#ifexpr: {{#expr: {{REVISIONTIMESTAMP}}-20120731160000 }} > 0 | yes }}
 
{{CURRENTTIMESTAMP}}
 
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{{#sparql:select * where { ?x ?y ?z . } LIMIT 100  |endpoint=http://localhost:8080/sparql/}}
 
{{#ask:[[Category:FFCP]][[Coexpression_cluster_id::C297]]|?id|?Short_description|?Phase1_expression|format=template|template=Datatable_sampledata|sep=,|limit=20000}}
 
{{#jstest:
{{#ask:[[Category:FF Ontology]][[Sample_species::Mouse (Mus musculus)]]|?id|?Name|?sample_tissue|?sample_cell_line=|?sample_cell_type|?rna_sample_type|format=template|template=Datatable_sampledata|sep=,|limit=2000}}
}}
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{{#sparql:
SELECT * WHERE { ?x ?y ?z FILTER regex(?z, "GO")
} LIMIT 10
|endpoint=http://go.bio2rdf.org/sparql/
|footer=NO
}}
 
 
 
 
 
 
<!--
{{#sparql:select * where { ?x ?y ?z . } LIMIT 10  |endpoint=http://localhost:8080/sparql/}}
 
{{#sparql:
PREFIX prop:<http://f5-webapp2/resource_browser/index.php/Special:URIResolver/Property-3A>
PREFIX page:<http://f5-webapp2/resource_browser/index.php/Special:URIResolver/>
SELECT ?x,?y WHERE {
?x
prop:Sample_species
?y FILTER regex(?y, "OMO", "i" )
} LIMIT 100
|endpoint=http://localhost:8080/sparql/
|headers=Page,Id
|footer=NO
}}
 
 
-->

Latest revision as of 18:50, 20 February 2014

FF ontology idNameSample categoryDatafreeze phase
10000-101A1Clontech Human Universal Reference Total RNA, pool1tissues2
10001-101A3Clontech Mouse Universal Reference Total RNA, pool1tissues2
10002-101A5SABiosciences XpressRef Human Universal Total RNA, pool1tissues2
10003-101A7SABiosciences XpressRef Mouse Universal Total RNA, pool1tissues2
10004-101A9chicken embryo whole body, day10 (HH37)tissues-1
10005-101B1{{{name}}}{{{sample_category}}}-1
10006-101B2Universal RNA - Dog Normal Tissues Biochain, pool1tissues-1
10007-101B4Universal RNA - Human Normal Tissues Biochain, pool1tissues2
10008-101B6Universal RNA - Mouse Normal Tissues Biochain, pool1tissues2
10009-101B8Universal RNA - Rat Normal Tissues Biochain, pool1tissues-1
10010-101C1adipose tissue, adult, pool1tissues2
10011-101C2bladder, adult, pool1tissues2
10012-101C3brain, adult, pool1tissues2
10013-101C4cervix, adult, pool1tissues2
10014-101C5colon, adult, pool1tissues2
10015-101C6esophagus, adult, pool1tissues2
10016-101C7heart, adult, pool1tissues2
10017-101C8kidney, adult, pool1tissues2
10018-101C9liver, adult, pool1tissues2
10019-101D1lung, adult, pool1tissues2