Personal tools

User:Hisa: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(74 intermediate revisions by the same user not shown)
Line 1: Line 1:
motif without matrices
[[Swissregulon:SRY.p1]]
[[Swissregulon:HOX(A,B,D)3.p1]]
doubled top motif tables
CNhs10855 & CNhs11062
CNhs11245 & CNhs11183
CNhs11248 & CNhs11185
CNhs11772 & CNhs12996
CNhs11781 & CNhs12997
== enrichment analysis ==
<html>
<html>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.js"></script>
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.min.js"></script>
 
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/extras/TableTools/media/js/TableTools.min.js"></script>
<style type="text/css" title="currentStyle">
<style type="text/css" title="currentStyle">
@import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css";
@import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css";
@import "/resource_browser/rb_js/datatables/extras/TableTools/media/css/TableTools.css";
</style>
                      <script>


.table_title{
text-align:left;
font-size:small;
text-decoration:underline;
color:darkgoldenrod;
}
</style>
<script type="text/javascript">
$(document).ready(function() {
$(document).ready(function() {
var motifs = ['1-CAATGACATC,CNhs11969,BestGuess:CREM_f1_HM09(0.737411560462348),T:1497.0(57.75%),B:21513.5(46.33%),P:1e-30','1-CSGATGAAT,CNhs12011,BestGuess:Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq/Homer(0.678135376239164),T:462.0(37.62%),B:11082.2(23.47%),P:1e-27','1-GGAGGAGRAGG,CNhs13817,BestGuess:MZF1.p2.SwissRegulon.nucfreq(0.73663833101872),T:834.0(34.32%),B:11155.7(23.85%),P:1e-30','1-TATKWNTTCMGTGTY,BestGuess:PB0012.1_Elf3_1(0.645092744449619),T:56.0(2.15%),B:42.5(0.09%),P:1e-44','1-TGAGTCATTTCCT,CNhs10837,BestGuess:BATF_si_HM09(0.744616642587065),T:140.0(15.12%),B:2484.2(5.17%),P:1e-28','1-TGGTCCYSCTGGTCC,BestGuess:MA0267.1_ACE2(0.614022138603491),T:70.0(3.79%),B:93.8(0.20%),P:1e-62','1-TWTTWVNSCS,CNhs11086,BestGuess:HMGA1_f1_HM09(0.621491710547325),T:376.0(31.95%),B:8855.4(18.54%),P:1e-27','10-ACTTCCTCTTCC,CNhs12563,BestGuess:PU.1(ETS)/ThioMac-PU.1-ChIP-Seq/Homer(0.742292052878174),T:576.0(13.16%),B:3275.9(7.45%),P:1e-38','10-ATCGATTG,BestGuess:HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)(0.719249319691647),T:2807.0(39.90%),B:13696.2(32.89%),P:1e-29','10-CGCGTGTTA,CNhs13235,BestGuess:AHR_ARNT_ARNT2.p2.SwissRegulon.nucfreq(0.731547557187781),T:1365.0(55.20%),B:19304.7(43.43%),P:1e-31','10-GCTTHCTCAT,CNhs13227,BestGuess:SPIB_f1_HM09(0.679182037171933),T:251.0(7.98%),B:1662.7(3.71%),P:1e-27','10-GGGAAGTGACG,CNhs13546,BestGuess:SPI1.p2.SwissRegulon.nucfreq(0.748115754357721),T:285.0(6.10%),B:880.7(1.99%),P:1e-58','10-GGTTTCTTTT,CNhs12311,BestGuess:STAT2_f1_HM09(0.738888127059946),T:856.0(19.39%),B:5883.4(13.38%),P:1e-28','10-GTAACHDC,CNhs12354,BestGuess:OVOL1_f1_HM09(0.671505012970234),T:1108.0(36.13%),B:12113.6(27.10%),P:1e-27','10-GTGATGTCACT,CNhs11999,BestGuess:CREM_f1_HM09(0.731019089758793),T:1647.0(42.96%),B:14369.6(33.04%),P:1e-36','10-GTTTCTACG,CNhs13237,BestGuess:RFX1_f1_HM09(0.675590669667085),T:710.0(25.47%),B:6908.9(15.69%),P:1e-39','10-TCCTCCGATT,CNhs13795,BestGuess:Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer(0.671867263860539),T:1802.0(40.57%),B:14207.3(32.43%),P:1e-29','10-TCTATGAC,CNhs10632,BestGuess:MAFG_si_HM09(0.722940260759648),T:496.0(9.31%),B:2315.3(5.37%),P:1e-30','10-TCTBACKA,CNhs11049,BestGuess:SMAD3_f1_HM09(0.594452084885537),T:658.0(26.79%),B:8012.1(17.81%),P:1e-27','10-TGCGTCATTT,CNhs13549,BestGuess:FOXN1.p2.SwissRegulon.nucfreq(0.720851359815688),T:544.0(18.62%),B:4951.5(10.83%),P:1e-35','10-TGTCACTGCG,BestGuess:PB0091.1_Zbtb3_1(0.661422118679983),T:923.0(20.12%),B:6011.2(13.78%),P:1e-28','10-VGGAAACGAC,CNhs13491,BestGuess:REL_do_HM09(0.735873087466282),T:323.0(10.71%),B:2330.8(5.04%),P:1e-35','10-WGACAAC,CNhs13239,BestGuess:Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq/Homer(0.741488069271231),T:2239.0(73.77%),B:27365.4(62.56%),P:1e-38','10-YGAGTCHYTD,CNhs13471,BestGuess:SMRC1_f1_HM09(0.728242935500498),T:401.0(5.09%),B:775.8(1.89%),P:1e-66','11-AACGAATCGA,CNhs11047,BestGuess:SOX4_f1_HM09(0.589011831866508),T:924.0(33.58%),B:10312.0(23.25%),P:1e-34','11-AGGCAGTACCTC,CNhs13493,BestGuess:ETV7_si_HM09(0.609389946537654),T:4256.0(60.40%),B:22100.9(52.82%),P:1e-37','11-CGGGGAAATTAC,CNhs11958,BestGuess:NFkB-p65-Rel(RHD)/LPS-exp/Homer(0.731055342133736),T:406.0(7.71%),B:1569.7(3.61%),P:1e-43','11-CGTCTGCGTA,CNhs11998,BestGuess:MAFB.p2.SwissRegulon.nucfreq(0.625154891780755),T:1573.0(41.98%),B:13603.9(31.40%),P:1e-41','11-GATTTCACAACC,CNhs13208,BestGuess:CEBPA_do_HM09(0.72106432208863),T:200.0(6.08%),B:1156.0(2.54%),P:1e-27','11-GCTGTGACGA,CNhs12546,BestGuess:E4F1_f1_HM09(0.73045265958925),T:1017.0(18.90%),B:4818.1(11.21%),P:1e-60','11-GTAACGCCCC,CNhs13480,BestGuess:RELB_si_HM09(0.668442487331342),T:306.0(6.72%),B:1487.7(3.41%),P:1e-27','11-TCGGGGTGTTTT,CNhs10853,BestGuess:FOXO3_si_HM09(0.632686100110058),T:433.0(14.33%),B:3647.7(8.30%),P:1e-27','11-TSACGCSTCAGT,CNhs13485,BestGuess:CREB1_f1_HM09(0.648721945847651),T:2933.0(44.14%),B:14777.5(34.97%),P:1e-53','11-TTTGAGGAAGTTG,CNhs10852,BestGuess:ETV4_f1_HM09(0.727516093263617),T:454.0(6.03%),B:1264.6(3.06%),P:1e-39','11-WACGYACGTG,CNhs12343,BestGuess:ARNT_f1_HM09(0.704807301786755),T:842.0(24.82%),B:7417.0(16.81%),P:1e-31','11-WGTGKKTTTT,CNhs13239,BestGuess:RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer(0.737747370786036),T:738.0(24.32%),B:6663.9(15.23%),P:1e-38','12-CGCGGCGGCGGCT,CNhs11959,BestGuess:EGR1_f2_HM09(0.69303244198093),T:6852.0(74.70%),B:27632.3(68.98%),P:1e-33','12-CSCCYTTTWA,CNhs11049,BestGuess:GTF2A1,2.p2.SwissRegulon.nucfreq(0.675210679139049),T:631.0(25.69%),B:7523.0(16.72%),P:1e-28','12-GCNGTGTRAC,CNhs13549,BestGuess:OVOL1_f1_HM09(0.643209920572819),T:233.0(7.98%),B:1564.2(3.42%),P:1e-30','12-GTAGCWCSGC,CNhs13238,BestGuess:RFX2_f1_HM09(0.622836631783224),T:960.0(37.01%),B:11807.9(26.86%),P:1e-29','12-GWTYKNKNTTG,CNhs11955,BestGuess:BRCA1_f1_HM09(0.666699894093852),T:663.0(15.80%),B:4371.9(10.11%),P:1e-29','12-GYTTGWTATTG,CNhs12563,BestGuess:ARI5B_f1_HM09(0.72648803831284),T:2107.0(48.15%),B:17419.3(39.59%),P:1e-29','12-SSARTSACMRCA,CNhs13545,BestGuess:PAX2_si_HM09(0.7022499609152),T:3506.0(43.86%),B:13765.9(33.72%),P:1e-78','12-TGCAGTNTTT,BestGuess:PB0146.1_Mafk_2(0.747344236872539),T:1408.0(26.75%),B:8671.2(20.11%),P:1e-27','12-TGWCACGGCG,CNhs12575,BestGuess:TGIF1_si_HM09(0.644167299035481),T:829.0(18.90%),B:5522.3(12.44%),P:1e-33','13-AATTCCG,CNhs13473,BestGuess:TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer(0.742732423596976),T:1770.0(21.55%),B:5986.4(14.72%),P:1e-60','13-CBTACGCAA,CNhs11998,BestGuess:CEBPE_f1_HM09(0.675146696744791),T:583.0(15.56%),B:4102.7(9.47%),P:1e-31','13-CGTCACAGGAAAC,CNhs11959,BestGuess:EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer(0.731501031790585),T:4914.0(53.57%),B:19036.8(47.52%),P:1e-30','13-GGATTTGT,BestGuess:Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer(0.704713043873326),T:2522.0(46.38%),B:16396.8(38.37%),P:1e-29','13-GGCTGKTACT,BestGuess:TEAD4_f1_HMv8(0.691325689706636),T:2800.0(39.80%),B:13514.0(32.45%),P:1e-32','13-GTACTTTCCA,CNhs11997,BestGuess:TF65_f2_HM09(0.730812743090709),T:1367.0(19.00%),B:5104.8(12.27%),P:1e-59','13-GTGTCABACG,CNhs11956,BestGuess:ARNT2_si_HM09(0.598471375174173),T:684.0(15.18%),B:3792.5(8.84%),P:1e-42','13-MGCTGACACACGC,CNhs13544,BestGuess:MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.68771280716031),T:4206.0(60.89%),B:22115.3(52.76%),P:1e-41','13-STTYSWCWTCY,CNhs13546,BestGuess:PU.1-IRF/Bcell-PU.1-ChIP-Seq/Homer(0.739002763202313),T:232.0(4.97%),B:858.6(1.94%),P:1e-35','14-ACWTCYTGCTT,CNhs12548,BestGuess:Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer(0.685452287521708),T:142.0(2.20%),B:256.1(0.61%),P:1e-36','14-ATTACGC,CNhs12549,BestGuess:CEBPE_f1_HM09(0.709655510778844),T:3300.0(40.34%),B:13020.1(32.23%),P:1e-53','14-CACTTCCGTAA,CNhs13465,BestGuess:SPI1.p2.SwissRegulon.nucfreq(0.688199677424306),T:306.0(4.40%),B:869.7(2.07%),P:1e-32','14-RSCGSWVTCT,CNhs11047,BestGuess:TYY1_f2_HM09(0.585001225521592),T:704.0(25.58%),B:7676.3(17.31%),P:1e-27','14-TACGCCC,CNhs13471,BestGuess:EGR3_f1_HM09(0.728073178641985),T:1954.0(24.82%),B:7818.6(19.01%),P:1e-36','14-TSTCRGCTR,CNhs13489,BestGuess:MAFB_f1_HM09(0.674358944842871),T:1012.0(20.67%),B:6452.1(14.63%),P:1e-29','14-TTAMCGKAA,CNhs13495,BestGuess:Stat3(Stat)/mES-Stat3-ChIP-Seq/Homer(0.726352248535498),T:311.0(5.24%),B:1047.9(2.44%),P:1e-33','15-AGRMAACCG,CNhs11998,BestGuess:BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer(0.712534743949132),T:570.0(15.21%),B:4013.1(9.26%),P:1e-30','15-CWTCTGACTV,CNhs10852,BestGuess:MAFG_si_HM09(0.740487223186701),T:775.0(10.29%),B:2472.4(5.98%),P:1e-46','15-NNNTDAGHAA,CNhs11954,BestGuess:BATF_si_HM09(0.732951413982858),T:337.0(4.60%),B:775.9(1.87%),P:1e-47','15-TKABWMGC,CNhs12546,BestGuess:VSX2_si_HM09(0.661951514590448),T:2707.0(50.30%),B:17865.7(41.55%),P:1e-37','16-ATGACTCACTT,CNhs13470,BestGuess:FOS_FOS{B,L1}_JUN{B,D}.p2.SwissRegulon.nucfreq(0.725128996863668),T:251.0(3.88%),B:660.4(1.55%),P:1e-36','16-GCTTYCTS,CNhs11956,BestGuess:ETV4_f1_HM09(0.734276630539657),T:1423.0(31.57%),B:10127.8(23.60%),P:1e-33','16-GTKACGDWGC,CNhs12001,BestGuess:E4F1_f1_HM09(0.725021247236754),T:381.0(7.83%),B:1593.4(3.75%),P:1e-38','16-RBYKBTWACG,CNhs11998,BestGuess:E4F1_f1_HM09(0.704946787356956),T:366.0(9.77%),B:2267.0(5.23%),P:1e-28','16-TCAGCTGACG,CNhs13544,BestGuess:TFAP4_si_HM09(0.738629634845809),T:2815.0(40.75%),B:13928.4(33.23%),P:1e-38','18-GAAGTGGGTGG,CNhs13470,BestGuess:GLI3_si_HM09(0.721664887876974),T:598.0(9.25%),B:2289.8(5.37%),P:1e-35','2-AATGCGTT,CNhs12398,BestGuess:TEAD1.p2.SwissRegulon.nucfreq(0.665777336042668),T:494.0(21.54%),B:6046.5(13.10%),P:1e-28','2-AWTSGCT,CNhs13795,BestGuess:CEBPZ_si_HM09(0.744042497450074),T:453.0(10.20%),B:2373.4(5.42%),P:1e-36','2-CCTTTTAA,CNhs10616,BestGuess:TBP.p2.SwissRegulon.nucfreq(0.686755716817853),T:576.0(32.43%),B:9446.6(20.01%),P:1e-34'];
    var oTable = $('.ff_sample_list').dataTable({
var pval = [1,1,1,1,6.13482e-09,1,1,1,1,1,0.999604,1,1,1,1,1,1,1,1,1,1,0.00708028,1,1,1,1,0.999946,1,1,1,1,1,0.997015,1,1,1,1,1,1,1,1,0.999984,1,1,1,0.00816367,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.0100364,1,1,0.96714,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999993,1,1,1,1,1,1,1,1,1,1,5.89797e-08,0.999999,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.993238,1,1,1,1,1,1,1,1,0.0390238,1,1,0.343053,1,1,0.980803,1,1,1,0.999689,1,1,1,1,1,1,1,1,1,1,1,1,0.825871,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.997359,1,1,1,1,1,1,1,1,1,1,1,1,0.999947,1,1,0.998966,1,1,1,1,1,1,1,1,1,1,1,1,1,0.911901,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999755,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.000493084,8.77295e-51,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.998598,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999987,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999974,1,1,1,1,1,1,1,1,1,1,1,1,0,1,1,1,1,1,1,1,0.991086,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.906871,1,0.994737,1,0.834479,1,0.997178,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.993321,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1.05417e-08,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.835013,1,9.23934e-10,1,1,1,1,1,1,1,1,1,1,1,1,1,0.997324,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999999,0.938664,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.337207,1,1,1,1,1,1,0.999988,1,1,1,0.645058,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999992,1.51362e-09,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.988897,1,0.99984,1,1,1,0.999998,1,1,0.989695,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,9.93892e-06,1,1,1,1,1,1,1,1,1,1,1,1,1,0.702219,1,1,1,1,1,1,1,1,1,1,1,1,6.60378e-15,1.49915e-09,1,1,1,7.26153e-12,1.56756e-07,1,1,0.560302,1,1,0.199247,1.76124e-05,0.99994,1,1,1,2.55112e-06,0.323866,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1.42689e-05,1,1,1,0.561362,1,1,1,0.0545097,1,5.60293e-08,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.003232,1,0.999999,1,1,1,1,1.86691e-11,1,1,1,1,0.879851,0.953685,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.606544,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999975,1,1,1,0.999998,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.00434176,1,1,1,0.999999,1,1,1,1,1,1,1,0.999999,1,1,1,1,1,1,1,0.99999,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999976,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.998762,1,0.303727,1,1,2.07678e-05,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999991,1,2.07441e-34,1,0.957223,1,1,1,1,1,1,1,1,1,0.999946,1,1,1,0.999943,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1];
var data = [];
for(i1=0;i1<motifs.length;i1++){
//data.push([motifs[i1],pval[i1]]);
data.push([motifs[i1],""]);
}


    $('#tfbs_overexpression_table').dataTable({
//"aaData": [["one", 1],["two", 3],["three", 0]],
"aaData": data,
"aoColumns": [{ "sTitle": "Motifs", "sWidth": "200pt", "fnRender": function(obj) {return sReturn = obj.aData[ obj.iDataColumn ].replace("BestGuess","<br>BestGuess");}},{ "sTitle": "p-value" }]
});
});
});
});
</script>
</script>
<table id="tfbs_overexpression_table"></table>
</html>
</html>


 
{{#ask:[[Concept:FF_samples_withname]]|[[Sample_species::Human (Homo sapiens)]]|mainlabel=FF ontology id|?Name|?Sample_category|?datafreeze_phase
 
|format=ttable|class=ff_sample_list|limit=20|searchlabel=}}
{{REVISIONTIMESTAMP}}
{{#ifexpr: {{#expr: {{REVISIONTIMESTAMP}}-20120731160000 }} > 0 | yes }}
 
{{CURRENTTIMESTAMP}}
 
<!--
{{#sparql:select * where { ?x ?y ?z . } LIMIT 100  |endpoint=http://localhost:8080/sparql/}}
 
{{#ask:[[Category:FFCP]][[Coexpression_cluster_id::C297]]|?id|?Short_description|?Phase1_expression|format=template|template=Datatable_sampledata|sep=,|limit=20000}}
 
{{#jstest:
{{#ask:[[Category:FF Ontology]][[Sample_species::Mouse (Mus musculus)]]|?id|?Name|?sample_tissue|?sample_cell_line=|?sample_cell_type|?rna_sample_type|format=template|template=Datatable_sampledata|sep=,|limit=2000}}
}}
-->
{{#sparql:
SELECT * WHERE { ?x ?y ?z FILTER regex(?z, "GO")
} LIMIT 10
|endpoint=http://go.bio2rdf.org/sparql/
|footer=NO
}}
 
 
 
 
 
 
<!--
{{#sparql:select * where { ?x ?y ?z . } LIMIT 10  |endpoint=http://localhost:8080/sparql/}}
 
{{#sparql:
PREFIX prop:<http://f5-webapp2/resource_browser/index.php/Special:URIResolver/Property-3A>
PREFIX page:<http://f5-webapp2/resource_browser/index.php/Special:URIResolver/>
SELECT ?x,?y WHERE {
?x
prop:Sample_species
?y FILTER regex(?y, "OMO", "i" )
} LIMIT 100
|endpoint=http://localhost:8080/sparql/
|headers=Page,Id
|footer=NO
}}
 
 
-->

Latest revision as of 18:50, 20 February 2014

FF ontology idNameSample categoryDatafreeze phase
10000-101A1Clontech Human Universal Reference Total RNA, pool1tissues2
10001-101A3Clontech Mouse Universal Reference Total RNA, pool1tissues2
10002-101A5SABiosciences XpressRef Human Universal Total RNA, pool1tissues2
10003-101A7SABiosciences XpressRef Mouse Universal Total RNA, pool1tissues2
10004-101A9chicken embryo whole body, day10 (HH37)tissues-1
10005-101B1{{{name}}}{{{sample_category}}}-1
10006-101B2Universal RNA - Dog Normal Tissues Biochain, pool1tissues-1
10007-101B4Universal RNA - Human Normal Tissues Biochain, pool1tissues2
10008-101B6Universal RNA - Mouse Normal Tissues Biochain, pool1tissues2
10009-101B8Universal RNA - Rat Normal Tissues Biochain, pool1tissues-1
10010-101C1adipose tissue, adult, pool1tissues2
10011-101C2bladder, adult, pool1tissues2
10012-101C3brain, adult, pool1tissues2
10013-101C4cervix, adult, pool1tissues2
10014-101C5colon, adult, pool1tissues2
10015-101C6esophagus, adult, pool1tissues2
10016-101C7heart, adult, pool1tissues2
10017-101C8kidney, adult, pool1tissues2
10018-101C9liver, adult, pool1tissues2
10019-101D1lung, adult, pool1tissues2
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=User:Hisa&oldid=3265626"