FFCP PHASE1:Hg19::chrX:152771377..152771404,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1044 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=50bp_to_ENST00000492658_5end | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_14_at_BGN_5end | |||
|id=chrX:152771377..152771404,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-22!180;CL:0000057!9.34e-13!75;CL:0000359!5.91e-12!32;CL:0000187!8.14e-12!54;CL:0000183!1.20e-11!59;CL:0000680!4.05e-11!57;CL:0000056!4.05e-11!57;CL:0000355!4.05e-11!57;CL:0000222!4.82e-11!119;CL:0000393!1.40e-10!60;CL:0000211!1.40e-10!60;CL:0000192!6.35e-09!42;CL:0000514!6.35e-09!42;CL:0002494!2.66e-08!16;CL:0002334!3.09e-07!12;CL:0000327!6.77e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000327;2.75e-10;15!CL:0000359;3.57e-09;32!CL:0000499;3.62e-08;28!CL:0002620;9.84e-08;23!CL:0002570;2.28e-07;8!CL:0000153;4.91e-07;9!CL:0000447;4.91e-07;9!CL:0002334;6.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.18e-13,76;CL:0000327,1.76e-10,15;CL:0000359,2.68e-09,32;CL:0000499,2.47e-08,28;CL:0002620,1.08e-07,23;CL:0000153,3.88e-07,9;CL:0000447,3.88e-07,9;CL:0002570,4.13e-07,8;CL:0002334,4.45e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.03e-25!84;UBERON:0001009!4.60e-20!113;UBERON:0002049!5.48e-20!79;UBERON:0007798!5.48e-20!79;UBERON:0004535!2.85e-19!110;UBERON:0001981!1.03e-18!60;UBERON:0007500!1.03e-18!60;UBERON:0004537!1.03e-18!60;UBERON:0006965!1.03e-18!60;UBERON:0000055!3.31e-18!69;UBERON:0003914!1.10e-15!118;UBERON:0001637!1.94e-15!42;UBERON:0003509!1.94e-15!42;UBERON:0004572!1.94e-15!42;UBERON:0007100!6.61e-13!27;UBERON:0004573!1.09e-12!33;UBERON:0004571!1.09e-12!33;UBERON:0000948!2.83e-12!24;UBERON:0005498!2.83e-12!24;UBERON:0004140!2.83e-12!24;UBERON:0009881!2.83e-12!24;UBERON:0004141!2.83e-12!24;UBERON:0003084!2.83e-12!24;UBERON:0007005!2.83e-12!24;UBERON:0004139!2.83e-12!24;UBERON:0004291!2.83e-12!24;UBERON:0001134!1.26e-11!61;UBERON:0002036!1.26e-11!61;UBERON:0003082!1.26e-11!61;UBERON:0002385!3.16e-11!63;UBERON:0001015!3.16e-11!63;UBERON:0000383!3.16e-11!63;UBERON:0000477!1.71e-10!286;UBERON:0004111!3.33e-10!241;UBERON:0000025!3.74e-10!194;UBERON:0004290!1.04e-09!70;UBERON:0000914!3.17e-09!83;UBERON:0002329!3.17e-09!83;UBERON:0003077!3.17e-09!83;UBERON:0003059!3.17e-09!83;UBERON:0007282!3.17e-09!83;UBERON:0009618!3.17e-09!83;UBERON:0007285!3.17e-09!83;UBERON:0000490!5.70e-08!138;UBERON:0000119!1.46e-07!312;UBERON:0000486!2.07e-07!82;UBERON:0005256!2.48e-07!143;UBERON:0000947!3.50e-07!21;UBERON:0010191!3.50e-07!21;UBERON:0000475!5.12e-07!365;UBERON:0000483!7.30e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.22e-11;42!UBERON:0003509;5.22e-11;42!UBERON:0004572;5.22e-11;42!UBERON:0004573;5.96e-10;33!UBERON:0004571;5.96e-10;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.70e-19,83;UBERON:0007500,5.17e-15,59;UBERON:0001981,5.17e-15,59;UBERON:0004537,5.17e-15,59;UBERON:0006965,5.17e-15,59;UBERON:0002049,5.44e-15,78;UBERON:0007798,5.44e-15,78;UBERON:0000055,1.84e-14,68;UBERON:0004535,4.67e-14,109;UBERON:0001637,1.72e-13,42;UBERON:0003509,1.72e-13,42;UBERON:0004572,1.72e-13,42;UBERON:0001009,2.74e-13,112;UBERON:0003914,1.52e-12,117;UBERON:0004573,9.57e-11,33;UBERON:0004571,9.57e-11,33;UBERON:0000948,2.67e-07,24;UBERON:0005498,2.67e-07,24;UBERON:0004140,2.67e-07,24;UBERON:0009881,2.67e-07,24;UBERON:0004141,2.67e-07,24;UBERON:0003084,2.67e-07,24;UBERON:0007005,2.67e-07,24;UBERON:0004139,2.67e-07,24;UBERON:0004291,2.67e-07,24;UBERON:0004797,5.19e-07,7 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.704772020479856,3.00219895059391,1.34088328328186,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0.74259811776028,0.331397375727916,2.6893005858071,0.602694528023977,1.46062018077475,4.39139518911456,0,1.42800483870977,1.56727360739044,0,0,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,4.3372698286148,8.02140657017423,4.49024208778554,6.36228757640879,31.1446316993687,0,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0.993812036833525,0,1.73570250803797,0,1.25849830862972,1.10047216776027,2.08994966536811,0.258416759169329,0,1.33888245105868,0,0,1.95249646038536,0,2.43042584364528,0.446498641420399,0.44905874525234,0.337834441449967,1.53316637465883,0,1.46561395144326,0,0,0,6.95760732373446,5.69837302490609,0.132409180813219,17.2101972449288,2.4826786753885,0.560677600142307,9.60740961567345,4.44001587150888,0.622422070799533,2.2900814251847,1.30769522490767,7.87058623753643,8.64263886719998,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0.989067717114227,0,0,0,0.250237039743928,0,0,0.612975591598039,0.600952235626387,0.567160915800105,2.15267562826634,1.49490172172997,1.48352330811693,1.80054657650641,1.75189299705346,1.28820270022815,1.48893485065272,2.19409231913646,4.28722822709274,1.00973509697646,2.11714766877288,5.01102776138317,4.26011511019937,1.20902517873168,1.52604533079439,0,0,0,0,0,0,0.207322110030741,0,0,0,1.28648187638577,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,1.4763109092493,2.80483547606892,0.4115740113314,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,1.58803092537181,0.925971025153221,2.28304982681518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,3.1396703616701,1.30788020649984,1.7601188597028,1.55126058909333,3.57656445851882,4.22651376278,0.26593811658487,1.04007436911366,0,0,1.8649552531127,0.57191197463259,0,0,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,1.91699884393266,8.04033550838797,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0.167516265334349,2.55175500661265,0,0,0,2.33113834266366,2.00068208423871,2.17012018959788,13.7260768610333,11.4194552830184,7.7274183366628,6.91134348457008,4.8151375956435,4.5481500811197,8.27784570340039,2.65690239414175,2.21243002250044,0.347534457872331,9.79005787313703,8.5785855952714,0,0,0,0,0,0,1.98486246255021,2.14846762603287,6.45518217196069,0.640695746278505,3.58195074346692,2.57366273829772,2.96836132889982,1.85051632563187,3.01854933032316,0.0821271560138091,1.03850885836724,0.464841513839837,0.120859449591622,0,0,0.34444334449382,1.63882051206045,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0.215915916102139,20.0495428497376,0,0,0,0,0,0,0,0,0,0.325378394664303,1.13345112812495,0.0915694648183434,0,1.14853107599234,0,1.6068392984416,1.25671933779759,0.308097234229289,0.921022048356777,0.275673144969061,1.07420244868274,1.30515024522806,0.596586391912706,4.27353771104339,0,0,0,0,0,6.92587163027408,2.0911118104818,2.46426864140871,0.532306030317022,0.869932992075073,2.59453906745488,0.429374660225974,1.116475108079,1.58189712359363,0.190630193923825,0.511795582622668,0,2.22742273548156,3.13979456079692,0,0,0,0.606547444719948,1.58510321173008,0.842516912477962,0,1.21856744815642,4.22600587027022,0.136499911407986,0.141405431953713,4.52032466480971,0.551365343546124,3.3171948762061,3.94605796728386,0,0,0.202910376962704,1.8589409885985,3.94373843545138,0,0.196498082026242,0,0.354761064070598,2.11107635297664,1.97576935775941,0.379473173765715,0.699869440489966,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,18.1315669308473,0,0.251932747854276,0,0,2.48831670129446,0,0,0,0.493217028184668,0,0,0.969332746095218,0.185536196323703,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0.438770794307945,0,0,0.923403102045565,0,0,0,0.108647371922008,0.638002319463839,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,1.89559738885464,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.22308667769421,0,0,0,0,0.581934098930517,0,1.80784592624426,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,5.58564802544508,2.06244381610515,2.87149209830726,0.599037001496973,0.858452096273142,0.446342914883745,0.470284307407084,5.76479813667846,0,0,0,0.202210631562555,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.367182116944987,0,0,0,3.57347663186684,0.662091970365432,0,0,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| |||
|short_description=p14@BGN | |||
}} |
Revision as of 07:24, 23 January 2014
Short description: | p14@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_14_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 50bp_to_ENST00000492658_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.18e-13 | 76 |
extracellular matrix secreting cell | 1.76e-10 | 15 |
vascular associated smooth muscle cell | 2.68e-09 | 32 |
stromal cell | 2.47e-08 | 28 |
skin fibroblast | 1.08e-07 | 23 |
GAG secreting cell | 3.88e-07 | 9 |
carbohydrate secreting cell | 3.88e-07 | 9 |
mesenchymal stem cell of adipose | 4.13e-07 | 8 |
preadipocyte | 4.45e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 2.70e-19 | 83 |
epithelial tube open at both ends | 5.17e-15 | 59 |
blood vessel | 5.17e-15 | 59 |
blood vasculature | 5.17e-15 | 59 |
vascular cord | 5.17e-15 | 59 |
vasculature | 5.44e-15 | 78 |
vascular system | 5.44e-15 | 78 |
vessel | 1.84e-14 | 68 |
cardiovascular system | 4.67e-14 | 109 |
artery | 1.72e-13 | 42 |
arterial blood vessel | 1.72e-13 | 42 |
arterial system | 1.72e-13 | 42 |
circulatory system | 2.74e-13 | 112 |
epithelial tube | 1.52e-12 | 117 |
systemic artery | 9.57e-11 | 33 |
systemic arterial system | 9.57e-11 | 33 |
heart | 2.67e-07 | 24 |
primitive heart tube | 2.67e-07 | 24 |
primary heart field | 2.67e-07 | 24 |
anterior lateral plate mesoderm | 2.67e-07 | 24 |
heart tube | 2.67e-07 | 24 |
heart primordium | 2.67e-07 | 24 |
cardiac mesoderm | 2.67e-07 | 24 |
cardiogenic plate | 2.67e-07 | 24 |
heart rudiment | 2.67e-07 | 24 |
blood vessel layer | 5.19e-07 | 7 |