FFCP PHASE1:Hg19::chrX:142722844..142722891,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=139065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23502 | |||
|TSSclassifier=weak | |||
|UniProt=Q8IW52 | |||
|association_with_transcript=127bp_to_ENST00000338017,NM_173078,uc004fbx.2_5end | |||
|description=CAGE_peak_2_at_SLITRK4_5end | |||
|id=chrX:142722844..142722891,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.11e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.43e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.58e-20!115;UBERON:0005743!2.37e-17!86;UBERON:0001049!9.16e-17!57;UBERON:0005068!9.16e-17!57;UBERON:0006241!9.16e-17!57;UBERON:0007135!9.16e-17!57;UBERON:0001017!2.64e-16!82;UBERON:0002616!7.59e-16!59;UBERON:0001893!1.48e-15!34;UBERON:0002346!1.80e-15!90;UBERON:0003075!2.17e-15!86;UBERON:0007284!2.17e-15!86;UBERON:0002780!2.24e-15!41;UBERON:0001890!2.24e-15!41;UBERON:0006240!2.24e-15!41;UBERON:0002020!2.64e-15!34;UBERON:0003528!2.64e-15!34;UBERON:0001869!2.78e-15!32;UBERON:0002619!2.88e-15!22;UBERON:0000955!3.83e-15!69;UBERON:0006238!3.83e-15!69;UBERON:0002791!8.29e-15!33;UBERON:0003080!1.17e-14!42;UBERON:0002050!1.35e-14!605;UBERON:0005423!1.35e-14!605;UBERON:0000922!1.88e-14!612;UBERON:0000956!2.67e-14!25;UBERON:0000203!2.67e-14!25;UBERON:0001950!2.67e-14!20;UBERON:0000073!2.94e-14!94;UBERON:0001016!2.94e-14!94;UBERON:0000923!3.18e-14!604;UBERON:0005291!3.18e-14!604;UBERON:0006598!3.18e-14!604;UBERON:0002532!3.18e-14!604;UBERON:0003056!1.12e-11!61;UBERON:0000468!9.86e-11!659;UBERON:0000153!4.29e-10!129;UBERON:0007811!4.29e-10!129;UBERON:0000025!6.80e-10!194;UBERON:0000033!9.78e-10!123;UBERON:0000467!2.63e-08!625;UBERON:0000483!2.89e-08!309;UBERON:0000481!3.33e-08!347;UBERON:0000480!3.52e-08!626;UBERON:0000119!4.41e-08!312;UBERON:0000924!3.04e-07!173;UBERON:0006601!3.04e-07!173;UBERON:0000479!3.60e-07!787;UBERON:0004121!4.91e-07!169;UBERON:0004111!5.76e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.41e-25;22!UBERON:0001950;7.33e-24;20!UBERON:0000956;1.02e-21;25!UBERON:0000203;1.02e-21;25!UBERON:0001869;2.74e-20;32!UBERON:0002791;1.42e-18;32!UBERON:0001893;2.20e-18;34!UBERON:0003528;6.43e-18;34!UBERON:0002020;6.43e-18;34!UBERON:0002780;1.06e-12;41!UBERON:0001890;1.06e-12;41!UBERON:0000073;1.73e-10;53!UBERON:0002616;1.73e-10;53!UBERON:0001017;2.54e-10;75!UBERON:0000955;2.16e-09;68!UBERON:0000200;1.80e-08;6!UBERON:0002021;9.93e-08;5!UBERON:0001016;1.17e-07;83!UBERON:0001872;1.17e-07;5!UBERON:0001871;4.91e-07;6!UBERON:0000349;6.64e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.29e-25,22;UBERON:0001950,1.41e-23,20;UBERON:0001869,1.73e-22,32;UBERON:0000956,2.12e-21,25;UBERON:0000203,2.12e-21,25;UBERON:0001893,1.10e-20,34;UBERON:0002791,2.43e-20,32;UBERON:0003528,3.43e-20,34;UBERON:0002020,3.43e-20,34;UBERON:0001017,4.13e-20,81;UBERON:0000955,1.68e-18,68;UBERON:0006238,1.68e-18,68;UBERON:0000073,8.42e-18,53;UBERON:0002616,8.42e-18,53;UBERON:0001016,1.13e-17,89;UBERON:0001049,1.20e-17,56;UBERON:0005068,1.20e-17,56;UBERON:0006241,1.20e-17,56;UBERON:0007135,1.20e-17,56;UBERON:0002780,2.76e-17,41;UBERON:0001890,2.76e-17,41;UBERON:0003080,2.76e-17,41;UBERON:0006240,2.76e-17,41;UBERON:0007023,1.68e-10,114;UBERON:0002346,1.88e-10,86;UBERON:0010314,3.45e-10,132;UBERON:0003075,8.33e-10,82;UBERON:0007284,8.33e-10,82;UBERON:0003056,5.21e-09,61;UBERON:0000200,1.85e-08,6;UBERON:0000025,2.19e-08,192;UBERON:0001872,1.41e-07,5;UBERON:0002021,1.47e-07,5;UBERON:0001871,5.75e-07,6 | |||
|phase1_expression=1.63510541343501,0.214100523890983,1.40954404095971,0,0.446961094427288,4.36169262050184,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,2.6893005858071,6.62963980826375,8.03341099426111,8.29485757943862,0.123121058076788,0,0,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0.880801318004542,0.553995408531877,1.00272223735071,0.434021741431704,0,0.32389366601898,0,0.436194716338694,0.755751887377619,0.242584061187816,0,0,0,0,0.512321413058201,0.945928919554341,1.03423704220986,1.29096936716765,2.70852973188684,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0,0.521482918420201,0.65156653411535,0,0.736555271975129,0.632924774881769,1.26753171787165,1.91343869968539,1.04829322754188,2.3589012540764,4.6554836780867,3.05378614724452,0.570025487482497,2.18808344918999,2.55729815270488,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.473554504088034,0,0,0,0,2.43806866313962,6.03630773733273,5.88167784480239,0,0,0,0,0,0.283604451492204,0.221729397462564,0.614843499851882,1.37528029272598,0,0,0,0,0.132957960518865,0,0,0,0,1.72046919021225,0,0,0.838998872419812,4.95212475492121,1.67195973229448,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,1.06748995729705,0,7.46906484959439,4.04132016209064,5.23078089963068,0,0,0,0.624320153660641,1.1409436430889,2.24173020827702,0.352303495931295,0.161872944368132,0.561803226808994,0,1.10550885580591,0.309977343527296,0,0,0,0,0.673344455816265,0.375355559615893,0,0,0,0,4.42385514324082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,0,0,0,0.590789906681404,0,0,0.857839051492628,0,0,0,0,0,0,0,0.231860809950154,0.821860859650752,0,0,0,0,0,0,1.17002132569619,1.33768046059855,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.904902010304444,0,0,0.797814349754612,0,0,0,0.532844358032199,1.85871391755592,0,0,0.325736184293735,0,0.791951872933429,6.33022691825131,3.48613383440118,5.09862255028491,0,0.502257091432126,0,0,0,0,2.17171960001369,0.821905290201534,2.68591444859843,0,0,0,0,0,2.60279707715243,2.31986643833309,1.00509759200609,0.637938751653163,0,0,0,0.613457458595699,3.00102312635806,2.44138521329762,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.86091223510599,0.647142602455851,0.74709290462411,0,0,0,0.248107807818777,0,0,0,0,0.804269605718038,1.48418066444991,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0.902399225814824,1.61732207919271,0,0,3.37765212457202,0,0,0,1.54227252690289,0.270946437543853,1.00337954770971,0.764628819135115,0,0.223874754722178,0.219259876645935,0,0.769350375349168,0.984043937099117,0.650756789328606,0.103041011647722,0.732555718546747,0.41254749960294,0,0,0,2.12675580242668,0.154048617114644,0.614014698904518,1.10269257987624,0.859361958946189,0.870100163485371,0.681813019328807,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,2.21465597303108,9.53150969619124,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,2.94880919367287,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0.430234056612155,0.196498082026242,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,1.70894156152249,1.19115887728894,0,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,4.21195767170188,1.14117339516596,0,0,0,2.56940920165919,1.61439765752838,0,0,3.07240764308458,4.47352215784832,2.33588798396672,0,0,0,0,0,0,0,2.19762268907841,0,0,0,0,0,0,6.95903353436409,2.11004124615769,9.34993122192409,0,0,0.996239941255349,0,0,0,0,0,0,0.358042349351218,2.04628948090749,0.197286811273867,2.3948309234694,0,2.90799823828566,6.12269447868218,7.98455192004777,0.260427761085233,2.97363999987065,0,0,0.254253650292766,1.41832609060762,1.72371686620732,2.33283690706603,0,0.885741385813839,1.32656082487949,7.62908681585416,5.63954225649246,7.38869047383869,5.26524953169534,0,0,0.846452843541768,0.113942055847001,0,0,0,0,0.549585560411174,0,0,1.09886179476517,0,0,0,0,0,0.158936578980379,0.421996129056054,0,0,0,0,0.265372693510018,0,0,0,0,0.741412462787447,0,2.81117334870407,0,1.17398771359254,0,0.789168805698781,0,4.59109142445735,2.59064976476801,0,0,0,0.661983911750998,0.627865836814451,0,0,0,0,0,0,1.7472666824203,0,2.51566461351621,1.90032224424082,2.54557916864949,0.290967049465258,0,1.58186518546373,0,0.397429223405979,7.34405233088193,0.195551382734803,0.0801588202515337,0.426905989478705,0,0,0,0,0.14405479798815,0,0,0,0,0.305994652908965,0,0,0,1.27746588066972,4.29765441419957,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0.429226048136571,0,0.806201669840715,0,0,0,0,0,0,0,2.38568906942791,1.22583065500418,0,0,0,0,0,4.85996453264197,0,1.26089131678717,2.7276385830199,0.316801009558219,25.27951484593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| |||
|short_description=p2@SLITRK4 | |||
}} |
Revision as of 07:15, 23 January 2014
Short description: | p2@SLITRK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLITRK4_5end |
Coexpression cluster: | NA |
Association with transcript: | 127bp_to_ENST00000338017, NM_173078, uc004fbx.2_5end |
EntrezGene: | SLITRK4 |
HGNC: | 23502 |
UniProt: | Q8IW52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 3.29e-25 | 22 |
neocortex | 1.41e-23 | 20 |
cerebral hemisphere | 1.73e-22 | 32 |
cerebral cortex | 2.12e-21 | 25 |
pallium | 2.12e-21 | 25 |
telencephalon | 1.10e-20 | 34 |
regional part of telencephalon | 2.43e-20 | 32 |
brain grey matter | 3.43e-20 | 34 |
gray matter | 3.43e-20 | 34 |
central nervous system | 4.13e-20 | 81 |
brain | 1.68e-18 | 68 |
future brain | 1.68e-18 | 68 |
regional part of nervous system | 8.42e-18 | 53 |
regional part of brain | 8.42e-18 | 53 |
nervous system | 1.13e-17 | 89 |
neural tube | 1.20e-17 | 56 |
neural rod | 1.20e-17 | 56 |
future spinal cord | 1.20e-17 | 56 |
neural keel | 1.20e-17 | 56 |
regional part of forebrain | 2.76e-17 | 41 |
forebrain | 2.76e-17 | 41 |
anterior neural tube | 2.76e-17 | 41 |
future forebrain | 2.76e-17 | 41 |
adult organism | 1.68e-10 | 114 |
neurectoderm | 1.88e-10 | 86 |
structure with developmental contribution from neural crest | 3.45e-10 | 132 |
neural plate | 8.33e-10 | 82 |
presumptive neural plate | 8.33e-10 | 82 |
pre-chordal neural plate | 5.21e-09 | 61 |
gyrus | 1.85e-08 | 6 |
tube | 2.19e-08 | 192 |
parietal lobe | 1.41e-07 | 5 |
occipital lobe | 1.47e-07 | 5 |
temporal lobe | 5.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.43e-07 | 14 |